RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 GJA8P48165 433 aa11.4□□□□□ -0.59
TTC39A-201ENST00000262675 FXR1P51114 621 aaKnown RBP eCLIP11.4□□□□□ -0.59
TTC39A-201ENST00000262675 MAP3K10Q02779 954 aa11.4□□□□□ -0.59
TTC39A-201ENST00000262675 TCP10Q12799 353 aa11.4□□□□□ -0.59
TTC39A-201ENST00000262675 PRRT2Q7Z6L0 340 aaPredicted RBP11.4□□□□□ -0.59
TTC39A-201ENST00000262675 IL1RAPL2Q9NP60 686 aa11.4□□□□□ -0.59
TTC39A-201ENST00000262675 FAM198AQ9UFP1 575 aa11.4□□□□□ -0.59
TTC39A-201ENST00000262675 NR2E3Q9Y5X4 410 aa11.4□□□□□ -0.59
TTC39A-201ENST00000262675 GAKO14976 1311 aa11.39□□□□□ -0.59
TTC39A-201ENST00000262675 DOCK1Q14185 1865 aa11.39□□□□□ -0.59
TTC39A-201ENST00000262675 BCRP11274 1271 aa11.39□□□□□ -0.59
TTC39A-201ENST00000262675 PRDX5P30044 214 aa11.39□□□□□ -0.59
TTC39A-201ENST00000262675 ZSCAN23Q3MJ62 389 aa11.39□□□□□ -0.59
TTC39A-201ENST00000262675 TSHZ3Q63HK5 1081 aa11.39□□□□□ -0.59
TTC39A-201ENST00000262675 DZIP1Q86YF9 867 aaKnown RBP11.39□□□□□ -0.59
TTC39A-201ENST00000262675 COPRSQ9NQ92 184 aa11.39□□□□□ -0.59
TTC39A-201ENST00000262675 ECHDC1Q9NTX5 307 aa11.39□□□□□ -0.59
TTC39A-201ENST00000262675 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.39□□□□□ -0.59
TTC39A-201ENST00000262675 ZSWIM8A7E2V4 1837 aa11.39□□□□□ -0.59
TTC39A-201ENST00000262675 PRPF40AO75400 957 aaKnown RBP11.38□□□□□ -0.59
TTC39A-201ENST00000262675 OS9Q13438 667 aaPredicted RBP11.38□□□□□ -0.59
TTC39A-201ENST00000262675 MOGSQ13724 837 aa11.38□□□□□ -0.59
TTC39A-201ENST00000262675 DIXDC1Q155Q3 683 aa11.38□□□□□ -0.59
TTC39A-201ENST00000262675 CAVIN1Q6NZI2 390 aaKnown RBP11.38□□□□□ -0.59
TTC39A-201ENST00000262675 PXYLP1Q8TE99 480 aa11.38□□□□□ -0.59
TTC39A-201ENST00000262675 TM6SF1Q9BZW5 370 aa11.38□□□□□ -0.59
TTC39A-201ENST00000262675 BIN2Q9UBW5 565 aaPredicted RBP11.38□□□□□ -0.59
TTC39A-201ENST00000262675 PNMA3Q9UL41 463 aa11.38□□□□□ -0.59
TTC39A-201ENST00000262675 PALD1Q9ULE6 856 aa11.38□□□□□ -0.59
TTC39A-201ENST00000262675 COL2A1P02458 1487 aaPredicted RBP11.38□□□□□ -0.59
TTC39A-201ENST00000262675 PHF20L1A8MW92 1017 aa11.38□□□□□ -0.59
TTC39A-201ENST00000262675 TBC1D12O60347 775 aa11.38□□□□□ -0.59
TTC39A-201ENST00000262675 IGSF3O75054 1194 aa11.38□□□□□ -0.59
TTC39A-201ENST00000262675 LDHCP07864 332 aa11.38□□□□□ -0.59
TTC39A-201ENST00000262675 CCL5P13501 91 aa11.38□□□□□ -0.59
TTC39A-201ENST00000262675 NCLP19338 710 aaKnown RBP11.38□□□□□ -0.59
TTC39A-201ENST00000262675 GSTO1P78417 241 aa11.38□□□□□ -0.59
TTC39A-201ENST00000262675 NFIAQ12857 509 aa11.38□□□□□ -0.59
TTC39A-201ENST00000262675 IRF5Q13568 498 aa11.38□□□□□ -0.59
TTC39A-201ENST00000262675 PKP1Q13835 747 aa11.38□□□□□ -0.59
TTC39A-201ENST00000262675 KCNB2Q92953 911 aa11.38□□□□□ -0.59
TTC39A-201ENST00000262675 EVI5LQ96CN4 794 aa11.38□□□□□ -0.59
TTC39A-201ENST00000262675 ZSCAN31Q96LW9 406 aaPredicted RBP11.38□□□□□ -0.59
TTC39A-201ENST00000262675 LSG1Q9H089 658 aaKnown RBP11.38□□□□□ -0.59
TTC39A-201ENST00000262675 COLQQ9Y215 455 aaPredicted RBP11.38□□□□□ -0.59
TTC39A-201ENST00000262675 ATP6V1DQ9Y5K8 247 aa11.38□□□□□ -0.59
TTC39A-201ENST00000262675 RFX7Q2KHR2 1363 aa11.38□□□□□ -0.59
TTC39A-201ENST00000262675 ATRNL1Q5VV63 1379 aa11.38□□□□□ -0.59
TTC39A-201ENST00000262675 H0YGN5 161 aa11.37□□□□□ -0.59
TTC39A-201ENST00000262675 PTPRAP18433 802 aa11.37□□□□□ -0.59
TTC39A-201ENST00000262675 PABPC4Q13310 644 aaKnown RBP eCLIP11.37□□□□□ -0.59
TTC39A-201ENST00000262675 GPAT2Q6NUI2 795 aa11.37□□□□□ -0.59
TTC39A-201ENST00000262675 LRSAM1Q6UWE0 723 aa11.37□□□□□ -0.59
TTC39A-201ENST00000262675 ZSCAN29Q8IWY8 852 aaPredicted RBP11.37□□□□□ -0.59
TTC39A-201ENST00000262675 DPF3Q92784 378 aa11.37□□□□□ -0.59
TTC39A-201ENST00000262675 DIAPH3Q9NSV4 1193 aa11.37□□□□□ -0.59
TTC39A-201ENST00000262675 AFG3L2Q9Y4W6 797 aa11.37□□□□□ -0.59
TTC39A-201ENST00000262675 ZHX2Q9Y6X8 837 aa11.37□□□□□ -0.59
TTC39A-201ENST00000262675 PTPRFP10586 1907 aa11.37□□□□□ -0.59
TTC39A-201ENST00000262675 A0A1W2PPC1 479 aa11.37□□□□□ -0.59
TTC39A-201ENST00000262675 IFIT2P09913 472 aaKnown RBP11.37□□□□□ -0.59
TTC39A-201ENST00000262675 CCDC102BQ68D86 513 aa11.37□□□□□ -0.59
TTC39A-201ENST00000262675 RNF208Q9H0X6 261 aa11.37□□□□□ -0.59
TTC39A-201ENST00000262675 SIL1Q9H173 461 aa11.37□□□□□ -0.59
TTC39A-201ENST00000262675 LIMCH1Q9UPQ0 1083 aa11.37□□□□□ -0.59
TTC39A-201ENST00000262675 MROH7-TTC4A0A0A0MT08 1334 aa11.36□□□□□ -0.59
TTC39A-201ENST00000262675 PHKA1P46020 1223 aa11.36□□□□□ -0.59
TTC39A-201ENST00000262675 UBE2Q1Q7Z7E8 422 aa11.36□□□□□ -0.59
TTC39A-201ENST00000262675 TMEM87AQ8NBN3 555 aa11.36□□□□□ -0.59
TTC39A-201ENST00000262675 PROCA1Q8NCQ7 364 aaPredicted RBP11.36□□□□□ -0.59
TTC39A-201ENST00000262675 COA7Q96BR5 231 aa11.36□□□□□ -0.59
TTC39A-201ENST00000262675 SHISA4Q96DD7 197 aa11.36□□□□□ -0.59
TTC39A-201ENST00000262675 TTC14Q96N46 770 aa11.36□□□□□ -0.59
TTC39A-201ENST00000262675 OSBPL5Q9H0X9 879 aaPredicted RBP11.36□□□□□ -0.59
TTC39A-201ENST00000262675 SH2B1Q9NRF2 756 aaPredicted RBP11.36□□□□□ -0.59
TTC39A-201ENST00000262675 SNRKQ9NRH2 765 aa11.36□□□□□ -0.59
TTC39A-201ENST00000262675 SNX14Q9Y5W7 946 aa11.36□□□□□ -0.59
TTC39A-201ENST00000262675 CTGFP29279 349 aa11.35□□□□□ -0.59
TTC39A-201ENST00000262675 GCLCP48506 637 aaPredicted RBP11.35□□□□□ -0.59
TTC39A-201ENST00000262675 PRKCZQ05513 592 aa11.35□□□□□ -0.59
TTC39A-201ENST00000262675 G3BP1Q13283 466 aaKnown RBP eCLIP11.35□□□□□ -0.59
TTC39A-201ENST00000262675 MTFR1Q15390 333 aa11.35□□□□□ -0.59
TTC39A-201ENST00000262675 CSPP1Q1MSJ5 1256 aa11.35□□□□□ -0.59
TTC39A-201ENST00000262675 GADL1Q6ZQY3 521 aa11.35□□□□□ -0.59
TTC39A-201ENST00000262675 GPT2Q8TD30 523 aa11.35□□□□□ -0.59
TTC39A-201ENST00000262675 SMCR8Q8TEV9 937 aaPredicted RBP11.35□□□□□ -0.59
TTC39A-201ENST00000262675 AGTPBP1Q9UPW5 1226 aa11.35□□□□□ -0.59
TTC39A-201ENST00000262675 PHIPQ8WWQ0 1821 aa11.35□□□□□ -0.59
TTC39A-201ENST00000262675 GPR75-ASB3A0A0A6YYF3 556 aa11.35□□□□□ -0.59
TTC39A-201ENST00000262675 ADCY3O60266 1144 aa11.35□□□□□ -0.59
TTC39A-201ENST00000262675 FARP2O94887 1054 aaPredicted RBP11.35□□□□□ -0.59
TTC39A-201ENST00000262675 LETM1O95202 739 aaPredicted RBP11.35□□□□□ -0.59
TTC39A-201ENST00000262675 SGPL1O95470 568 aa11.35□□□□□ -0.59
TTC39A-201ENST00000262675 MYCP01106 439 aaPredicted RBP11.35□□□□□ -0.59
TTC39A-201ENST00000262675 VPS53Q5VIR6 699 aa11.35□□□□□ -0.59
TTC39A-201ENST00000262675 TICAM2Q86XR7 235 aa11.35□□□□□ -0.59
TTC39A-201ENST00000262675 TNPO2O14787 897 aaKnown RBP11.34□□□□□ -0.59
TTC39A-201ENST00000262675 ZKSCAN1P17029 563 aaPredicted RBP11.34□□□□□ -0.59
TTC39A-201ENST00000262675 BTDP43251 543 aa11.34□□□□□ -0.59
TTC39A-201ENST00000262675 ZSCAN30Q86W11 494 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms