RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 ENTPD3O75355 529 aa16.18■□□□□ 0.18
SGCA-201ENST00000262018 IFIT1P09914 478 aaKnown RBP16.18■□□□□ 0.18
SGCA-201ENST00000262018 XRCC5P13010 732 aaKnown RBP16.18■□□□□ 0.18
SGCA-201ENST00000262018 SPP2Q13103 211 aa16.18■□□□□ 0.18
SGCA-201ENST00000262018 TRMT44Q8IYL2 757 aaKnown RBP16.18■□□□□ 0.18
SGCA-201ENST00000262018 SSH3Q8TE77 659 aa16.18■□□□□ 0.18
SGCA-201ENST00000262018 DOCK1Q14185 1865 aa16.17■□□□□ 0.18
SGCA-201ENST00000262018 DDTLA6NHG4 134 aaPredicted RBP16.17■□□□□ 0.18
SGCA-201ENST00000262018 LDHBP07195 334 aaKnown RBP16.17■□□□□ 0.18
SGCA-201ENST00000262018 HMGCS2P54868 508 aa16.17■□□□□ 0.18
SGCA-201ENST00000262018 SMAD3P84022 425 aaKnown RBP16.17■□□□□ 0.18
SGCA-201ENST00000262018 MAP3K10Q02779 954 aa16.17■□□□□ 0.18
SGCA-201ENST00000262018 POLA2Q14181 598 aa16.17■□□□□ 0.18
SGCA-201ENST00000262018 SOCS4Q8WXH5 440 aa16.17■□□□□ 0.18
SGCA-201ENST00000262018 IDI2Q9BXS1 227 aa16.17■□□□□ 0.18
SGCA-201ENST00000262018 MORF4L1Q9UBU8 362 aa16.17■□□□□ 0.18
SGCA-201ENST00000262018 MTX1Q13505 466 aa16.16■□□□□ 0.18
SGCA-201ENST00000262018 CCL14Q16627 93 aa16.16■□□□□ 0.18
SGCA-201ENST00000262018 USP38Q8NB14 1042 aa16.16■□□□□ 0.18
SGCA-201ENST00000262018 PEX10O60683 326 aa16.15■□□□□ 0.18
SGCA-201ENST00000262018 RTP1P59025 263 aa16.15■□□□□ 0.18
SGCA-201ENST00000262018 PUM3Q15397 648 aaKnown RBP16.15■□□□□ 0.18
SGCA-201ENST00000262018 ZNF280CQ8ND82 737 aa16.15■□□□□ 0.18
SGCA-201ENST00000262018 ATP11BQ9Y2G3 1177 aa16.15■□□□□ 0.18
SGCA-201ENST00000262018 FGFR2P21802 821 aa16.14■□□□□ 0.17
SGCA-201ENST00000262018 IRX3P78415 501 aaPredicted RBP16.14■□□□□ 0.17
SGCA-201ENST00000262018 PICALMQ13492 652 aa16.14■□□□□ 0.17
SGCA-201ENST00000262018 MAST2Q6P0Q8 1798 aa16.14■□□□□ 0.17
SGCA-201ENST00000262018 FAM196BA6NMK8 535 aa16.13■□□□□ 0.17
SGCA-201ENST00000262018 HOXD11P31277 338 aaPredicted RBP16.13■□□□□ 0.17
SGCA-201ENST00000262018 RGS2P41220 211 aa16.13■□□□□ 0.17
SGCA-201ENST00000262018 MAP3K12Q12852 859 aa16.13■□□□□ 0.17
SGCA-201ENST00000262018 CCAR1Q8IX12 1150 aaKnown RBP16.13■□□□□ 0.17
SGCA-201ENST00000262018 GPRC5AQ8NFJ5 357 aa16.13■□□□□ 0.17
SGCA-201ENST00000262018 KLHDC4Q8TBB5 520 aa16.13■□□□□ 0.17
SGCA-201ENST00000262018 DDX4Q9NQI0 724 aaKnown RBP16.13■□□□□ 0.17
SGCA-201ENST00000262018 PRDM5Q9NQX1 630 aaPredicted RBP16.13■□□□□ 0.17
SGCA-201ENST00000262018 ZBTB47Q9UFB7 747 aaPredicted RBP16.13■□□□□ 0.17
SGCA-201ENST00000262018 SLC5A1P13866 664 aa16.12■□□□□ 0.17
SGCA-201ENST00000262018 BADQ92934 168 aa16.12■□□□□ 0.17
SGCA-201ENST00000262018 P2RX7Q99572 595 aaKnown RBP16.12■□□□□ 0.17
SGCA-201ENST00000262018 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.12■□□□□ 0.17
SGCA-201ENST00000262018 TXNRD2Q9NNW7 524 aa16.12■□□□□ 0.17
SGCA-201ENST00000262018 LOC285556D6RIA3 1793 aa16.12■□□□□ 0.17
SGCA-201ENST00000262018 LTBP2Q14767 1821 aa16.11■□□□□ 0.17
SGCA-201ENST00000262018 MAPK4P31152 587 aa16.11■□□□□ 0.17
SGCA-201ENST00000262018 USP6NLQ92738 828 aa16.11■□□□□ 0.17
SGCA-201ENST00000262018 EXOC6BQ9Y2D4 811 aa16.11■□□□□ 0.17
SGCA-201ENST00000262018 MYH13Q9UKX3 1938 aa16.11■□□□□ 0.17
SGCA-201ENST00000262018 RFX7Q2KHR2 1363 aa16.11■□□□□ 0.17
SGCA-201ENST00000262018 SRGAP3O43295 1099 aa16.11■□□□□ 0.17
SGCA-201ENST00000262018 RAB11FIP3O75154 756 aa16.11■□□□□ 0.17
SGCA-201ENST00000262018 GRIN2CQ14957 1233 aa16.11■□□□□ 0.17
SGCA-201ENST00000262018 PLEKHM2Q8IWE5 1019 aa16.11■□□□□ 0.17
SGCA-201ENST00000262018 APBA2Q99767 749 aa16.11■□□□□ 0.17
SGCA-201ENST00000262018 TBC1D2Q9BYX2 928 aa16.11■□□□□ 0.17
SGCA-201ENST00000262018 OSBPL5Q9H0X9 879 aaPredicted RBP16.11■□□□□ 0.17
SGCA-201ENST00000262018 USP17L5A8MUK1 530 aa16.1■□□□□ 0.17
SGCA-201ENST00000262018 SMARCA5O60264 1052 aaPredicted RBP16.1■□□□□ 0.17
SGCA-201ENST00000262018 TBC1D12O60347 775 aa16.1■□□□□ 0.17
SGCA-201ENST00000262018 CNGA1P29973 690 aa16.1■□□□□ 0.17
SGCA-201ENST00000262018 HERVK_113P62684 666 aa16.1■□□□□ 0.17
SGCA-201ENST00000262018 BMP2KLQ5H9B9 411 aa16.1■□□□□ 0.17
SGCA-201ENST00000262018 SH3D19Q5HYK7 790 aa16.1■□□□□ 0.17
SGCA-201ENST00000262018 MORN1Q5T089 497 aa16.1■□□□□ 0.17
SGCA-201ENST00000262018 MFSD14CQ5VZR4 134 aa16.1■□□□□ 0.17
SGCA-201ENST00000262018 GPR142Q7Z601 462 aa16.1■□□□□ 0.17
SGCA-201ENST00000262018 PLEKHH3Q7Z736 793 aa16.1■□□□□ 0.17
SGCA-201ENST00000262018 PPM1EQ8WY54 764 aa16.1■□□□□ 0.17
SGCA-201ENST00000262018 LPIN2Q92539 896 aa16.1■□□□□ 0.17
SGCA-201ENST00000262018 LRRCC1Q9C099 1032 aa16.1■□□□□ 0.17
SGCA-201ENST00000262018 PORCNQ9H237 461 aa16.1■□□□□ 0.17
SGCA-201ENST00000262018 CWC22Q9HCG8 908 aaKnown RBP16.1■□□□□ 0.17
SGCA-201ENST00000262018 DDX20Q9UHI6 824 aaKnown RBP16.1■□□□□ 0.17
SGCA-201ENST00000262018 NOP58Q9Y2X3 529 aaKnown RBP16.1■□□□□ 0.17
SGCA-201ENST00000262018 GAKO14976 1311 aa16.09■□□□□ 0.17
SGCA-201ENST00000262018 DNM1LO00429 736 aa16.09■□□□□ 0.17
SGCA-201ENST00000262018 RFX5P48382 616 aaPredicted RBP16.09■□□□□ 0.17
SGCA-201ENST00000262018 Q3C1V9 767 aa16.09■□□□□ 0.17
SGCA-201ENST00000262018 HSP90AB4PQ58FF6 505 aa16.09■□□□□ 0.17
SGCA-201ENST00000262018 ADAMTS19Q8TE59 1207 aa16.09■□□□□ 0.17
SGCA-201ENST00000262018 LPAR1Q92633 364 aa16.09■□□□□ 0.17
SGCA-201ENST00000262018 AS3MTQ9HBK9 375 aa16.09■□□□□ 0.17
SGCA-201ENST00000262018 GNL3LQ9NVN8 582 aaKnown RBP16.09■□□□□ 0.17
SGCA-201ENST00000262018 SALL1Q9NSC2 1324 aa16.08■□□□□ 0.17
SGCA-201ENST00000262018 ERVK-9P63128 1117 aa16.08■□□□□ 0.16
SGCA-201ENST00000262018 ERVK-24P63145 666 aa16.08■□□□□ 0.16
SGCA-201ENST00000262018 MTMR2Q13614 643 aa16.08■□□□□ 0.16
SGCA-201ENST00000262018 ATXN2LQ8WWM7 1075 aaKnown RBP16.08■□□□□ 0.16
SGCA-201ENST00000262018 RNPC3Q96LT9 517 aaKnown RBP16.08■□□□□ 0.16
SGCA-201ENST00000262018 PAGR1Q9BTK6 254 aa16.08■□□□□ 0.16
SGCA-201ENST00000262018 TMOD4Q9NZQ9 345 aa16.08■□□□□ 0.16
SGCA-201ENST00000262018 RBPJLQ9UBG7 517 aa16.08■□□□□ 0.16
SGCA-201ENST00000262018 FRMPD3Q5JV73 1810 aa16.08■□□□□ 0.16
SGCA-201ENST00000262018 DNAH12Q6ZR08 3092 aa16.07■□□□□ 0.16
SGCA-201ENST00000262018 APBB1O00213 710 aa16.07■□□□□ 0.16
SGCA-201ENST00000262018 MSCO60682 206 aa16.07■□□□□ 0.16
SGCA-201ENST00000262018 SURF6O75683 361 aaKnown RBP16.07■□□□□ 0.16
SGCA-201ENST00000262018 HOXA7P31268 230 aaPredicted RBP16.07■□□□□ 0.16
SGCA-201ENST00000262018 CAP2P40123 477 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms