RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 ZNF512BQ96KM6 892 aaPredicted RBP22.62■■□□□ 1.21
KHDC1-201ENST00000257765 GINM1Q9NU53 330 aa22.62■■□□□ 1.21
KHDC1-201ENST00000257765 GJD2Q9UKL4 321 aa22.62■■□□□ 1.21
KHDC1-201ENST00000257765 DDX60LQ5H9U9 1706 aaKnown RBP22.62■■□□□ 1.21
KHDC1-201ENST00000257765 RANBP2P49792 3224 aaKnown RBP22.61■■□□□ 1.21
KHDC1-201ENST00000257765 C19orf81C9J6K1 198 aa22.61■■□□□ 1.21
KHDC1-201ENST00000257765 GDF11O95390 407 aa22.61■■□□□ 1.21
KHDC1-201ENST00000257765 HOXA7P31268 230 aaPredicted RBP22.61■■□□□ 1.21
KHDC1-201ENST00000257765 ZAP70P43403 619 aa22.61■■□□□ 1.21
KHDC1-201ENST00000257765 NECAB2Q7Z6G3 386 aa22.61■■□□□ 1.21
KHDC1-201ENST00000257765 ANKLE1Q8NAG6 615 aa22.61■■□□□ 1.21
KHDC1-201ENST00000257765 DIS3LQ8TF46 1054 aaKnown RBP22.61■■□□□ 1.21
KHDC1-201ENST00000257765 HMX1Q9NP08 348 aaPredicted RBP22.61■■□□□ 1.21
KHDC1-201ENST00000257765 PALD1Q9ULE6 856 aa22.61■■□□□ 1.21
KHDC1-201ENST00000257765 SZT2Q5T011 3432 aa22.6■■□□□ 1.21
KHDC1-201ENST00000257765 RPTORQ8N122 1335 aa22.6■■□□□ 1.21
KHDC1-201ENST00000257765 USP17L10C9JJH3 530 aa22.6■■□□□ 1.21
KHDC1-201ENST00000257765 HLA-DOAP06340 250 aa22.6■■□□□ 1.21
KHDC1-201ENST00000257765 JAG1P78504 1218 aa22.6■■□□□ 1.21
KHDC1-201ENST00000257765 C1orf115Q9H7X2 142 aa22.6■■□□□ 1.21
KHDC1-201ENST00000257765 PIH1D3Q9NQM4 214 aaKnown RBP22.6■■□□□ 1.21
KHDC1-201ENST00000257765 ZBTB21Q9ULJ3 1066 aa22.6■■□□□ 1.21
KHDC1-201ENST00000257765 A0A1W2PPC1 479 aa22.59■■□□□ 1.21
KHDC1-201ENST00000257765 HERVK_113P62684 666 aa22.59■■□□□ 1.21
KHDC1-201ENST00000257765 TRIM32Q13049 653 aa22.59■■□□□ 1.21
KHDC1-201ENST00000257765 SHROOM1Q2M3G4 852 aaPredicted RBP22.59■■□□□ 1.21
KHDC1-201ENST00000257765 P2RX7Q99572 595 aaKnown RBP22.59■■□□□ 1.21
KHDC1-201ENST00000257765 SAP30BPQ9UHR5 308 aaKnown RBP22.59■■□□□ 1.21
KHDC1-201ENST00000257765 DBNLQ9UJU6 430 aaKnown RBP22.59■■□□□ 1.21
KHDC1-201ENST00000257765 FTSJ3Q8IY81 847 aaKnown RBP22.58■■□□□ 1.21
KHDC1-201ENST00000257765 GPRC5AQ8NFJ5 357 aa22.58■■□□□ 1.21
KHDC1-201ENST00000257765 SOCS4Q8WXH5 440 aa22.58■■□□□ 1.21
KHDC1-201ENST00000257765 TRIB2Q92519 343 aa22.58■■□□□ 1.21
KHDC1-201ENST00000257765 NOP58Q9Y2X3 529 aaKnown RBP22.58■■□□□ 1.21
KHDC1-201ENST00000257765 CYP2B6P20813 491 aa22.57■■□□□ 1.2
KHDC1-201ENST00000257765 CYP7A1P22680 504 aa22.57■■□□□ 1.2
KHDC1-201ENST00000257765 DYNLL1P63167 89 aaKnown RBP22.57■■□□□ 1.2
KHDC1-201ENST00000257765 NUDT12Q9BQG2 462 aa22.57■■□□□ 1.2
KHDC1-201ENST00000257765 TXNRD2Q9NNW7 524 aa22.57■■□□□ 1.2
KHDC1-201ENST00000257765 TLR7Q9NYK1 1049 aaKnown RBP22.57■■□□□ 1.2
KHDC1-201ENST00000257765 PEX10O60683 326 aa22.56■■□□□ 1.2
KHDC1-201ENST00000257765 IDH1O75874 414 aaKnown RBP22.56■■□□□ 1.2
KHDC1-201ENST00000257765 ITPRIPQ8IWB1 547 aa22.56■■□□□ 1.2
KHDC1-201ENST00000257765 GTF3C2Q8WUA4 911 aaPredicted RBP22.56■■□□□ 1.2
KHDC1-201ENST00000257765 CCDC8Q9H0W5 538 aaPredicted RBP22.56■■□□□ 1.2
KHDC1-201ENST00000257765 MAPK4P31152 587 aa22.55■■□□□ 1.2
KHDC1-201ENST00000257765 PDE3AQ14432 1141 aa22.55■■□□□ 1.2
KHDC1-201ENST00000257765 CERS3Q8IU89 383 aa22.55■■□□□ 1.2
KHDC1-201ENST00000257765 C7orf61Q8IZ16 206 aa22.55■■□□□ 1.2
KHDC1-201ENST00000257765 NBPF3Q9H094 633 aa22.55■■□□□ 1.2
KHDC1-201ENST00000257765 NAV1Q8NEY1 1877 aa22.54■■□□□ 1.2
KHDC1-201ENST00000257765 XRCC5P13010 732 aaKnown RBP22.54■■□□□ 1.2
KHDC1-201ENST00000257765 PRKAR2AP13861 404 aaKnown RBP22.54■■□□□ 1.2
KHDC1-201ENST00000257765 USP5P45974 858 aa22.54■■□□□ 1.2
KHDC1-201ENST00000257765 ERVK-9P63128 1117 aa22.54■■□□□ 1.2
KHDC1-201ENST00000257765 ERVK-24P63145 666 aa22.54■■□□□ 1.2
KHDC1-201ENST00000257765 MAP3K21Q5TCX8 1036 aa22.54■■□□□ 1.2
KHDC1-201ENST00000257765 USP17L2Q6R6M4 530 aa22.54■■□□□ 1.2
KHDC1-201ENST00000257765 CCAR1Q8IX12 1150 aaKnown RBP22.54■■□□□ 1.2
KHDC1-201ENST00000257765 MIGA1Q8NAN2 632 aa22.54■■□□□ 1.2
KHDC1-201ENST00000257765 EAF2Q96CJ1 260 aaPredicted RBP22.54■■□□□ 1.2
KHDC1-201ENST00000257765 PAGR1Q9BTK6 254 aa22.54■■□□□ 1.2
KHDC1-201ENST00000257765 EMILIN3Q9NT22 766 aa22.54■■□□□ 1.2
KHDC1-201ENST00000257765 RBPJLQ9UBG7 517 aa22.54■■□□□ 1.2
KHDC1-201ENST00000257765 STAP2Q9UGK3 403 aa22.54■■□□□ 1.2
KHDC1-201ENST00000257765 OGDHLQ9ULD0 1010 aa22.54■■□□□ 1.2
KHDC1-201ENST00000257765 GH2P01242 217 aa22.53■■□□□ 1.2
KHDC1-201ENST00000257765 ZKSCAN1P17029 563 aaPredicted RBP22.53■■□□□ 1.2
KHDC1-201ENST00000257765 TRMT44Q8IYL2 757 aaKnown RBP22.53■■□□□ 1.2
KHDC1-201ENST00000257765 FEZ1Q99689 392 aa22.53■■□□□ 1.2
KHDC1-201ENST00000257765 C11orf49Q9H6J7 331 aa22.53■■□□□ 1.2
KHDC1-201ENST00000257765 FRMPD3Q5JV73 1810 aa22.52■■□□□ 1.2
KHDC1-201ENST00000257765 MNX1P50219 401 aaPredicted RBP22.52■■□□□ 1.2
KHDC1-201ENST00000257765 MAGEB6Q8N7X4 407 aa22.52■■□□□ 1.2
KHDC1-201ENST00000257765 C12orf42Q96LP6 360 aa22.52■■□□□ 1.2
KHDC1-201ENST00000257765 PORCNQ9H237 461 aa22.52■■□□□ 1.2
KHDC1-201ENST00000257765 RLBP1P12271 317 aa22.51■■□□□ 1.19
KHDC1-201ENST00000257765 RGS2P41220 211 aa22.51■■□□□ 1.19
KHDC1-201ENST00000257765 Q3C1V9 767 aa22.51■■□□□ 1.19
KHDC1-201ENST00000257765 TATDN1Q6P1N9 297 aa22.51■■□□□ 1.19
KHDC1-201ENST00000257765 GPR142Q7Z601 462 aa22.51■■□□□ 1.19
KHDC1-201ENST00000257765 EHD4Q9H223 541 aa22.51■■□□□ 1.19
KHDC1-201ENST00000257765 SERPINB13Q9UIV8 391 aa22.51■■□□□ 1.19
KHDC1-201ENST00000257765 ZMYND8Q9ULU4 1186 aaPredicted RBP22.51■■□□□ 1.19
KHDC1-201ENST00000257765 SOX1O00570 391 aaPredicted RBP22.5■■□□□ 1.19
KHDC1-201ENST00000257765 MAP3K12Q12852 859 aa22.5■■□□□ 1.19
KHDC1-201ENST00000257765 ZYXQ15942 572 aaKnown RBP22.5■■□□□ 1.19
KHDC1-201ENST00000257765 TMED8Q6PL24 325 aaPredicted RBP22.5■■□□□ 1.19
KHDC1-201ENST00000257765 PLEKHH3Q7Z736 793 aa22.5■■□□□ 1.19
KHDC1-201ENST00000257765 USP6NLQ92738 828 aa22.5■■□□□ 1.19
KHDC1-201ENST00000257765 APBA2Q99767 749 aa22.5■■□□□ 1.19
KHDC1-201ENST00000257765 GDF15Q99988 308 aa22.5■■□□□ 1.19
KHDC1-201ENST00000257765 CWC22Q9HCG8 908 aaKnown RBP22.5■■□□□ 1.19
KHDC1-201ENST00000257765 NDUFB9Q9Y6M9 179 aa22.5■■□□□ 1.19
KHDC1-201ENST00000257765 MORN1Q5T089 497 aa22.49■■□□□ 1.19
KHDC1-201ENST00000257765 CEP85Q6P2H3 762 aa22.49■■□□□ 1.19
KHDC1-201ENST00000257765 TTC6Q86TZ1 520 aa22.49■■□□□ 1.19
KHDC1-201ENST00000257765 ANTXR1Q9H6X2 564 aa22.49■■□□□ 1.19
KHDC1-201ENST00000257765 USP17L15C9J2P7 530 aa22.48■■□□□ 1.19
KHDC1-201ENST00000257765 USP17L13C9JLJ4 530 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms