RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 WASF1Q92558 559 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 CCDC47Q96A33 483 aaKnown RBP13.9□□□□□ -0.18
USP30-201ENST00000257548 ADGRG1Q9Y653 693 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 FAM169AQ9Y6X4 670 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 MAST3O60307 1309 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 GOLGB1Q14789 3259 aaKnown RBP13.89□□□□□ -0.19
USP30-201ENST00000257548 RNMTO43148 476 aaKnown RBP13.89□□□□□ -0.19
USP30-201ENST00000257548 RTN1Q16799 776 aa13.89□□□□□ -0.19
USP30-201ENST00000257548 AKAP4Q5JQC9 854 aa13.89□□□□□ -0.19
USP30-201ENST00000257548 TC2NQ8N9U0 490 aa13.89□□□□□ -0.19
USP30-201ENST00000257548 CABLES1Q8TDN4 633 aa13.89□□□□□ -0.19
USP30-201ENST00000257548 HAUS7Q99871 368 aa13.89□□□□□ -0.19
USP30-201ENST00000257548 HELLSQ9NRZ9 838 aa13.89□□□□□ -0.19
USP30-201ENST00000257548 CRB1P82279 1406 aa13.89□□□□□ -0.19
USP30-201ENST00000257548 RPSAP08865 295 aaKnown RBP13.89□□□□□ -0.19
USP30-201ENST00000257548 PDCLQ13371 301 aa13.89□□□□□ -0.19
USP30-201ENST00000257548 EFCAB13Q8IY85 973 aa13.89□□□□□ -0.19
USP30-201ENST00000257548 CCDC42Q96M95 316 aa13.89□□□□□ -0.19
USP30-201ENST00000257548 PUS3Q9BZE2 481 aaKnown RBP13.89□□□□□ -0.19
USP30-201ENST00000257548 PHF8Q9UPP1 1060 aa13.89□□□□□ -0.19
USP30-201ENST00000257548 A0A087WUV0 522 aaPredicted RBP13.89□□□□□ -0.19
USP30-201ENST00000257548 M0R2C6 588 aa13.89□□□□□ -0.19
USP30-201ENST00000257548 CDC27P30260 824 aa13.89□□□□□ -0.19
USP30-201ENST00000257548 MCM7P33993 719 aa13.89□□□□□ -0.19
USP30-201ENST00000257548 CTDSPL2Q05D32 466 aa13.89□□□□□ -0.19
USP30-201ENST00000257548 KANK3Q6NY19 840 aa13.89□□□□□ -0.19
USP30-201ENST00000257548 CYP26C1Q6V0L0 522 aa13.89□□□□□ -0.19
USP30-201ENST00000257548 TOM1L2Q6ZVM7 507 aa13.89□□□□□ -0.19
USP30-201ENST00000257548 MED4Q9NPJ6 270 aa13.89□□□□□ -0.19
USP30-201ENST00000257548 MROH7-TTC4A0A0A0MT08 1334 aa13.89□□□□□ -0.19
USP30-201ENST00000257548 RIMS1Q86UR5 1692 aaKnown RBP13.88□□□□□ -0.19
USP30-201ENST00000257548 C2orf54Q08AI8 447 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 CCDC178Q5BJE1 867 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 MMS22LQ6ZRQ5 1243 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 METTL16Q86W50 562 aaKnown RBP13.88□□□□□ -0.19
USP30-201ENST00000257548 TMTC1Q8IUR5 882 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 MIGA1Q8NAN2 632 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 JAKMIP2Q96AA8 810 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.88□□□□□ -0.19
USP30-201ENST00000257548 ZHX3Q9H4I2 956 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 MMRN2Q9H8L6 949 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 LRP2BPQ9P2M1 347 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 SMIM23A6NLE4 172 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 CKAP4Q07065 602 aaKnown RBP13.88□□□□□ -0.19
USP30-201ENST00000257548 USP49Q70CQ1 688 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 CACNA2D4Q7Z3S7 1137 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 EHD4Q9H223 541 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 EPN1Q9Y6I3 576 aaPredicted RBP13.88□□□□□ -0.19
USP30-201ENST00000257548 SPATA31D1Q6ZQQ2 1576 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 SBNO1A3KN83 1393 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 USO1O60763 962 aaKnown RBP13.88□□□□□ -0.19
USP30-201ENST00000257548 BEND6Q5SZJ8 279 aaPredicted RBP13.88□□□□□ -0.19
USP30-201ENST00000257548 CFAP58Q5T655 872 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 MFSD6Q6ZSS7 791 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 FCHSD1Q86WN1 690 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 SECISBP2LQ93073 1101 aaKnown RBP13.88□□□□□ -0.19
USP30-201ENST00000257548 ZNF496Q96IT1 587 aaPredicted RBP13.88□□□□□ -0.19
USP30-201ENST00000257548 EPSTI1Q96J88 318 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 NCAPGQ9BPX3 1015 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 VPS54Q9P1Q0 977 aa13.88□□□□□ -0.19
USP30-201ENST00000257548 RAD21O60216 631 aa13.87□□□□□ -0.19
USP30-201ENST00000257548 IGKV5-2P06315 115 aa13.87□□□□□ -0.19
USP30-201ENST00000257548 PTPN12Q05209 780 aaKnown RBP13.87□□□□□ -0.19
USP30-201ENST00000257548 GRIN1Q05586 938 aa13.87□□□□□ -0.19
USP30-201ENST00000257548 IFIT5Q13325 482 aaKnown RBP13.87□□□□□ -0.19
USP30-201ENST00000257548 WTAPQ15007 396 aa13.87□□□□□ -0.19
USP30-201ENST00000257548 DSCC1Q9BVC3 393 aa13.87□□□□□ -0.19
USP30-201ENST00000257548 DENND2AQ9ULE3 1009 aa13.87□□□□□ -0.19
USP30-201ENST00000257548 CEP170BQ9Y4F5 1589 aaPredicted RBP13.87□□□□□ -0.19
USP30-201ENST00000257548 LRRIQ3A6PVS8 624 aaPredicted RBP13.87□□□□□ -0.19
USP30-201ENST00000257548 PRDM1O75626 825 aa13.87□□□□□ -0.19
USP30-201ENST00000257548 TATP17735 454 aaPredicted RBP13.87□□□□□ -0.19
USP30-201ENST00000257548 ACTN3Q08043 901 aaPredicted RBP13.87□□□□□ -0.19
USP30-201ENST00000257548 IFT88Q13099 833 aa13.87□□□□□ -0.19
USP30-201ENST00000257548 AMOTQ4VCS5 1084 aa13.87□□□□□ -0.19
USP30-201ENST00000257548 MCTP2Q6DN12 878 aa13.87□□□□□ -0.19
USP30-201ENST00000257548 LRRC31Q6UY01 552 aa13.87□□□□□ -0.19
USP30-201ENST00000257548 NACAP1Q9BZK3 213 aa13.87□□□□□ -0.19
USP30-201ENST00000257548 NRXN3Q9Y4C0 1643 aa13.87□□□□□ -0.19
USP30-201ENST00000257548 OPA1O60313 960 aa13.87□□□□□ -0.19
USP30-201ENST00000257548 ADORA1P30542 326 aa13.87□□□□□ -0.19
USP30-201ENST00000257548 CYLC1P35663 651 aaPredicted RBP13.87□□□□□ -0.19
USP30-201ENST00000257548 IL15P40933 162 aaPredicted RBP13.87□□□□□ -0.19
USP30-201ENST00000257548 NLRP5P59047 1200 aa13.87□□□□□ -0.19
USP30-201ENST00000257548 WHAMMP3Q1A5X7 153 aa13.87□□□□□ -0.19
USP30-201ENST00000257548 MICALCLQ6ZW33 695 aa13.87□□□□□ -0.19
USP30-201ENST00000257548 GOPCQ9HD26 462 aa13.87□□□□□ -0.19
USP30-201ENST00000257548 IGSF1Q8N6C5 1336 aa13.86□□□□□ -0.19
USP30-201ENST00000257548 E7EVH7 732 aa13.86□□□□□ -0.19
USP30-201ENST00000257548 NEBLO76041 1014 aa13.86□□□□□ -0.19
USP30-201ENST00000257548 METTL22Q9BUU2 404 aaPredicted RBP13.86□□□□□ -0.19
USP30-201ENST00000257548 CSRNP2Q9H175 543 aa13.86□□□□□ -0.19
USP30-201ENST00000257548 CWC25Q9NXE8 425 aaPredicted RBP13.86□□□□□ -0.19
USP30-201ENST00000257548 PCDHB6Q9Y5E3 794 aa13.86□□□□□ -0.19
USP30-201ENST00000257548 KIF20BQ96Q89 1820 aa13.86□□□□□ -0.19
USP30-201ENST00000257548 CLSTN1O94985 981 aa13.86□□□□□ -0.19
USP30-201ENST00000257548 CCDC121Q6ZUS5 278 aa13.86□□□□□ -0.19
USP30-201ENST00000257548 NOSTRINQ8IVI9 506 aa13.86□□□□□ -0.19
USP30-201ENST00000257548 FAM89AQ96GI7 184 aa13.86□□□□□ -0.19
USP30-201ENST00000257548 GUCY2CP25092 1073 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms