RNA–Protein interactions for RNA: ENST00000256062.9

TMTC1-201, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene TMTC1, Length 8,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-201ENST00000256062 SH3TC1Q8TE82 1336 aa9.7□□□□□ -0.86
TMTC1-201ENST00000256062 PCDH11XQ9BZA7 1347 aa9.7□□□□□ -0.86
TMTC1-201ENST00000256062 PCDH11YQ9BZA8 1340 aa9.7□□□□□ -0.86
TMTC1-201ENST00000256062 TXNDC9O14530 226 aa9.7□□□□□ -0.86
TMTC1-201ENST00000256062 ALAS1P13196 640 aa9.7□□□□□ -0.86
TMTC1-201ENST00000256062 DOK7Q18PE1 504 aa9.7□□□□□ -0.86
TMTC1-201ENST00000256062 RIOK1Q9BRS2 568 aaKnown RBP9.7□□□□□ -0.86
TMTC1-201ENST00000256062 MRPL44Q9H9J2 332 aaKnown RBP9.7□□□□□ -0.86
TMTC1-201ENST00000256062 BZW2Q9Y6E2 419 aaKnown RBP9.7□□□□□ -0.86
TMTC1-201ENST00000256062 GPAA1O43292 621 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 GTF2IP78347 998 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 CTAGE3PQ8IX95 158 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 NSMCE1Q8WV22 266 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 TTC41PQ6P2S7 1318 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 PLB1Q6P1J6 1458 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 CLGNO14967 610 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 ZBTB24O43167 697 aaPredicted RBP9.69□□□□□ -0.86
TMTC1-201ENST00000256062 RFC1P35251 1148 aaPredicted RBP9.69□□□□□ -0.86
TMTC1-201ENST00000256062 NONOQ15233 471 aaKnown RBP eCLIP9.69□□□□□ -0.86
TMTC1-201ENST00000256062 CCDC125Q86Z20 511 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 CNGA4Q8IV77 575 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 CCDC170Q8IYT3 715 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 ARHGAP45Q92619 1136 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 ARHGEF2Q92974 986 aaKnown RBP9.69□□□□□ -0.86
TMTC1-201ENST00000256062 SUGCTQ9HAC7 445 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 IFT140Q96RY7 1462 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 HOXC9P31274 260 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 DNM2P50570 870 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 PPP2R5AQ15172 486 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 DLGAP5Q15398 846 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 NIM1KQ8IY84 436 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 HINFPQ9BQA5 517 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 FAM207AQ9NSI2 230 aaPredicted RBP9.69□□□□□ -0.86
TMTC1-201ENST00000256062 ELP1O95163 1332 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.69□□□□□ -0.86
TMTC1-201ENST00000256062 DEXIO95424 95 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 VPS41P49754 854 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 PUM3Q15397 648 aaKnown RBP9.69□□□□□ -0.86
TMTC1-201ENST00000256062 HHATQ5VTY9 493 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 FYB2Q5VWT5 728 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 GADL1Q6ZQY3 521 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 CCDC105Q8IYK2 499 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 MLXIPQ9HAP2 919 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 THRAP3Q9Y2W1 955 aaKnown RBP9.69□□□□□ -0.86
TMTC1-201ENST00000256062 GOLGA8HP0CJ92 632 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 ANO1Q5XXA6 986 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 MMS19Q96T76 1030 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 PCDHB13Q9Y5F0 798 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 CUL7Q14999 1698 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 DNMBPQ6XZF7 1577 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 SYNRGQ9UMZ2 1314 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 IVLP07476 585 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 DNAJC10Q8IXB1 793 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 UHMK1Q8TAS1 419 aaKnown RBP9.69□□□□□ -0.86
TMTC1-201ENST00000256062 LGR6Q9HBX8 967 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 USP40Q9NVE5 1235 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 FAM184BQ9ULE4 1060 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 ABCB4P21439 1286 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 ARHGAP27Q6ZUM4 889 aa9.69□□□□□ -0.86
TMTC1-201ENST00000256062 SLC27A2O14975 620 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 KRT15P19012 456 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 CNNM4Q6P4Q7 775 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 NAP1L4Q99733 375 aaKnown RBP9.68□□□□□ -0.86
TMTC1-201ENST00000256062 SLF1Q9BQI6 1058 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.68□□□□□ -0.86
TMTC1-201ENST00000256062 VPS54Q9P1Q0 977 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 IL16Q14005 1332 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 IFNB1P01574 187 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 ZAP70P43403 619 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 LACTBP83111 547 aaPredicted RBP9.68□□□□□ -0.86
TMTC1-201ENST00000256062 CHMP6Q96FZ7 201 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 MAP3K5Q99683 1374 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 FAM135AQ9P2D6 1515 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 MKRN3Q13064 507 aaKnown RBP9.68□□□□□ -0.86
TMTC1-201ENST00000256062 SKA2Q8WVK7 121 aaPredicted RBP9.68□□□□□ -0.86
TMTC1-201ENST00000256062 WDR46O15213 610 aaKnown RBP9.68□□□□□ -0.86
TMTC1-201ENST00000256062 KCNA6P17658 529 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 TFAP4Q01664 338 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 SEPT6Q14141 434 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 ADAT2Q7Z6V5 191 aaKnown RBP9.68□□□□□ -0.86
TMTC1-201ENST00000256062 PLEKHM2Q8IWE5 1019 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 CSRNP2Q9H175 543 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 DNM3Q9UQ16 869 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 UBXN2AP68543 259 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 CABP7Q86V35 215 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 SECISBP2LQ93073 1101 aaKnown RBP9.68□□□□□ -0.86
TMTC1-201ENST00000256062 CARD10Q9BWT7 1032 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 ABCF3Q9NUQ8 709 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 MAGED2Q9UNF1 606 aaPredicted RBP9.68□□□□□ -0.86
TMTC1-201ENST00000256062 SCAF11Q99590 1463 aaKnown RBP9.68□□□□□ -0.86
TMTC1-201ENST00000256062 SLC4A1P02730 911 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 PAK1Q13153 545 aa9.68□□□□□ -0.86
TMTC1-201ENST00000256062 U2AF1L4Q8WU68 220 aaKnown RBP9.68□□□□□ -0.86
TMTC1-201ENST00000256062 PRPF31Q8WWY3 499 aaKnown RBP9.68□□□□□ -0.86
TMTC1-201ENST00000256062 VAMP4O75379 141 aa9.67□□□□□ -0.86
TMTC1-201ENST00000256062 TBC1D8O95759 1140 aa9.67□□□□□ -0.86
TMTC1-201ENST00000256062 RPS6KB1P23443 525 aa9.67□□□□□ -0.86
TMTC1-201ENST00000256062 UBL4BQ8N7F7 174 aa9.67□□□□□ -0.86
TMTC1-201ENST00000256062 NAPGQ99747 312 aaPredicted RBP9.67□□□□□ -0.86
TMTC1-201ENST00000256062 HELLSQ9NRZ9 838 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms