RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 ZSCAN22P10073 491 aaPredicted RBP13.47□□□□□ -0.25
CCNA1-201ENST00000255465 NPR1P16066 1061 aa13.47□□□□□ -0.25
CCNA1-201ENST00000255465 C3orf67Q6ZVT6 689 aa13.47□□□□□ -0.25
CCNA1-201ENST00000255465 ITPRIPQ8IWB1 547 aa13.47□□□□□ -0.25
CCNA1-201ENST00000255465 TTLL6Q8N841 843 aa13.47□□□□□ -0.25
CCNA1-201ENST00000255465 LINS1Q8NG48 757 aa13.47□□□□□ -0.25
CCNA1-201ENST00000255465 SAAL1Q96ER3 474 aa13.47□□□□□ -0.25
CCNA1-201ENST00000255465 PPP1R13BQ96KQ4 1090 aa13.47□□□□□ -0.25
CCNA1-201ENST00000255465 NLRP3Q96P20 1036 aa13.47□□□□□ -0.25
CCNA1-201ENST00000255465 NUP62CLQ9H1M0 184 aa13.47□□□□□ -0.25
CCNA1-201ENST00000255465 ATP6V0A4Q9HBG4 840 aa13.47□□□□□ -0.25
CCNA1-201ENST00000255465 DDX19AQ9NUU7 478 aaKnown RBP13.47□□□□□ -0.25
CCNA1-201ENST00000255465 SHOX2O60902 331 aaPredicted RBP13.46□□□□□ -0.25
CCNA1-201ENST00000255465 PCCAP05165 728 aaPredicted RBP13.46□□□□□ -0.25
CCNA1-201ENST00000255465 MCM6Q14566 821 aa13.46□□□□□ -0.25
CCNA1-201ENST00000255465 CCDC144BQ3MJ40 725 aa13.46□□□□□ -0.25
CCNA1-201ENST00000255465 BEND3Q5T5X7 828 aa13.46□□□□□ -0.25
CCNA1-201ENST00000255465 TTC22Q5TAA0 569 aa13.46□□□□□ -0.25
CCNA1-201ENST00000255465 FCHSD1Q86WN1 690 aa13.46□□□□□ -0.25
CCNA1-201ENST00000255465 CCDC144CPQ8IYA2 1237 aa13.46□□□□□ -0.25
CCNA1-201ENST00000255465 CCDC34Q96HJ3 373 aa13.46□□□□□ -0.25
CCNA1-201ENST00000255465 SRCIN1Q9C0H9 1055 aa13.46□□□□□ -0.25
CCNA1-201ENST00000255465 PCDHGA4Q9Y5G9 962 aa13.46□□□□□ -0.25
CCNA1-201ENST00000255465 CCDC88AQ3V6T2 1871 aa13.46□□□□□ -0.25
CCNA1-201ENST00000255465 TRIM27P14373 513 aa13.46□□□□□ -0.26
CCNA1-201ENST00000255465 GCKP35557 465 aa13.46□□□□□ -0.26
CCNA1-201ENST00000255465 CLNS1AP54105 237 aaKnown RBP13.46□□□□□ -0.26
CCNA1-201ENST00000255465 TUBB2AQ13885 445 aa13.46□□□□□ -0.26
CCNA1-201ENST00000255465 SLMAPQ14BN4 828 aa13.46□□□□□ -0.26
CCNA1-201ENST00000255465 CDCA2Q69YH5 1023 aaPredicted RBP13.46□□□□□ -0.26
CCNA1-201ENST00000255465 SLC4A10Q6U841 1118 aa13.46□□□□□ -0.26
CCNA1-201ENST00000255465 NCAPG2Q86XI2 1143 aa13.46□□□□□ -0.26
CCNA1-201ENST00000255465 CNNM3Q8NE01 707 aa13.46□□□□□ -0.26
CCNA1-201ENST00000255465 CNKSR1Q969H4 720 aa13.46□□□□□ -0.26
CCNA1-201ENST00000255465 TUBB2BQ9BVA1 445 aa13.46□□□□□ -0.26
CCNA1-201ENST00000255465 VIPAS39Q9H9C1 493 aa13.46□□□□□ -0.26
CCNA1-201ENST00000255465 FAM169AQ9Y6X4 670 aa13.46□□□□□ -0.26
CCNA1-201ENST00000255465 SBF1O95248 1867 aa13.45□□□□□ -0.26
CCNA1-201ENST00000255465 IRS4O14654 1257 aaPredicted RBP13.45□□□□□ -0.26
CCNA1-201ENST00000255465 EZRP15311 586 aaKnown RBP13.45□□□□□ -0.26
CCNA1-201ENST00000255465 TXLNAP40222 546 aa13.45□□□□□ -0.26
CCNA1-201ENST00000255465 ARHGAP25P42331 645 aa13.45□□□□□ -0.26
CCNA1-201ENST00000255465 LIG3P49916 1009 aa13.45□□□□□ -0.26
CCNA1-201ENST00000255465 GCKRQ14397 625 aa13.45□□□□□ -0.26
CCNA1-201ENST00000255465 B4GALNT4Q76KP1 1039 aa13.45□□□□□ -0.26
CCNA1-201ENST00000255465 TMTC2Q8N394 836 aa13.45□□□□□ -0.26
CCNA1-201ENST00000255465 GOLGA1Q92805 767 aa13.45□□□□□ -0.26
CCNA1-201ENST00000255465 NOB1Q9ULX3 412 aaKnown RBP13.45□□□□□ -0.26
CCNA1-201ENST00000255465 FER1L6Q2WGJ9 1857 aa13.45□□□□□ -0.26
CCNA1-201ENST00000255465 GOLGA6L9A6NEM1 432 aa13.44□□□□□ -0.26
CCNA1-201ENST00000255465 HOXA10P31260 410 aaPredicted RBP13.44□□□□□ -0.26
CCNA1-201ENST00000255465 RAB27AP51159 221 aa13.44□□□□□ -0.26
CCNA1-201ENST00000255465 PSMD2Q13200 908 aa13.44□□□□□ -0.26
CCNA1-201ENST00000255465 YTHDF3Q7Z739 585 aaKnown RBP13.44□□□□□ -0.26
CCNA1-201ENST00000255465 LUZP1Q86V48 1076 aa13.44□□□□□ -0.26
CCNA1-201ENST00000255465 RPGRQ92834 1020 aaKnown RBP13.44□□□□□ -0.26
CCNA1-201ENST00000255465 CCDC97Q96F63 343 aaPredicted RBP13.44□□□□□ -0.26
CCNA1-201ENST00000255465 CHAMP1Q96JM3 812 aa13.44□□□□□ -0.26
CCNA1-201ENST00000255465 RAB21Q9UL25 225 aa13.44□□□□□ -0.26
CCNA1-201ENST00000255465 NUB1Q9Y5A7 615 aa13.44□□□□□ -0.26
CCNA1-201ENST00000255465 ALDH1B1P30837 517 aa13.44□□□□□ -0.26
CCNA1-201ENST00000255465 FNTAP49354 379 aa13.44□□□□□ -0.26
CCNA1-201ENST00000255465 VPS53Q5VIR6 699 aa13.44□□□□□ -0.26
CCNA1-201ENST00000255465 PRPF40BQ6NWY9 871 aaKnown RBP13.44□□□□□ -0.26
CCNA1-201ENST00000255465 MFN1Q8IWA4 741 aa13.44□□□□□ -0.26
CCNA1-201ENST00000255465 PARD6BQ9BYG5 372 aa13.44□□□□□ -0.26
CCNA1-201ENST00000255465 CDHR2Q9BYE9 1310 aa13.43□□□□□ -0.26
CCNA1-201ENST00000255465 AHCYL1O43865 530 aa13.43□□□□□ -0.26
CCNA1-201ENST00000255465 RTN3O95197 1032 aaPredicted RBP13.43□□□□□ -0.26
CCNA1-201ENST00000255465 FAM163BP0C2L3 166 aa13.43□□□□□ -0.26
CCNA1-201ENST00000255465 SLC8A1P32418 973 aa13.43□□□□□ -0.26
CCNA1-201ENST00000255465 SMTNP53814 917 aa13.43□□□□□ -0.26
CCNA1-201ENST00000255465 DRP2Q13474 957 aa13.43□□□□□ -0.26
CCNA1-201ENST00000255465 KIF4BQ2VIQ3 1234 aa13.43□□□□□ -0.26
CCNA1-201ENST00000255465 E4F1Q66K89 784 aaPredicted RBP13.43□□□□□ -0.26
CCNA1-201ENST00000255465 TLDC1Q6P9B6 456 aa13.43□□□□□ -0.26
CCNA1-201ENST00000255465 UBE3BQ7Z3V4 1068 aa13.43□□□□□ -0.26
CCNA1-201ENST00000255465 ZNF526Q8TF50 670 aaPredicted RBP13.43□□□□□ -0.26
CCNA1-201ENST00000255465 CNPY2Q9Y2B0 182 aa13.43□□□□□ -0.26
CCNA1-201ENST00000255465 GOLGA6L19H0YKK7 550 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 PDE8AO60658 829 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 ALDH1L1O75891 902 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 AARSP49588 968 aaKnown RBP eCLIP13.42□□□□□ -0.26
CCNA1-201ENST00000255465 SF3B3Q15393 1217 aaKnown RBP13.42□□□□□ -0.26
CCNA1-201ENST00000255465 ANO6Q4KMQ2 910 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 FOXD4L5Q5VV16 416 aaPredicted RBP13.42□□□□□ -0.26
CCNA1-201ENST00000255465 FBXW10Q5XX13 1052 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 ARMCX6Q7L4S7 300 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 APLFQ8IW19 511 aaPredicted RBP13.42□□□□□ -0.26
CCNA1-201ENST00000255465 AFAP1L1Q8TED9 768 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 FOXD4L4Q8WXT5 416 aaPredicted RBP13.42□□□□□ -0.26
CCNA1-201ENST00000255465 THOC1Q96FV9 657 aaKnown RBP13.42□□□□□ -0.26
CCNA1-201ENST00000255465 RBM17Q96I25 401 aaKnown RBP13.42□□□□□ -0.26
CCNA1-201ENST00000255465 CRAMP1Q96RY5 1269 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 OSBPL9Q96SU4 736 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 PAGR1Q9BTK6 254 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 PDE11AQ9HCR9 933 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 FAN1Q9Y2M0 1017 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 PDLIM1O00151 329 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 NBPF7P0C2Y1 421 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms