RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 AGTPBP1Q9UPW5 1226 aa25.53■■□□□ 1.68
HCFC1R1-201ENST00000248089 ZSCAN25Q6NSZ9 544 aa25.52■■□□□ 1.68
HCFC1R1-201ENST00000248089 SMCR8Q8TEV9 937 aaPredicted RBP25.52■■□□□ 1.68
HCFC1R1-201ENST00000248089 PLCD1P51178 756 aa25.51■■□□□ 1.67
HCFC1R1-201ENST00000248089 MTMR2Q13614 643 aa25.51■■□□□ 1.67
HCFC1R1-201ENST00000248089 PROCA1Q8NCQ7 364 aaPredicted RBP25.51■■□□□ 1.67
HCFC1R1-201ENST00000248089 ZBTB47Q9UFB7 747 aaPredicted RBP25.51■■□□□ 1.67
HCFC1R1-201ENST00000248089 SLC45A1Q9Y2W3 748 aa25.51■■□□□ 1.67
HCFC1R1-201ENST00000248089 UBE3CQ15386 1083 aa25.5■■□□□ 1.67
HCFC1R1-201ENST00000248089 DCP1AQ9NPI6 582 aaPredicted RBP25.5■■□□□ 1.67
HCFC1R1-201ENST00000248089 PRKAB2O43741 272 aa25.49■■□□□ 1.67
HCFC1R1-201ENST00000248089 GH2P01242 217 aa25.49■■□□□ 1.67
HCFC1R1-201ENST00000248089 EVX2Q03828 476 aa25.49■■□□□ 1.67
HCFC1R1-201ENST00000248089 OTUD7AQ8TE49 926 aaPredicted RBP25.49■■□□□ 1.67
HCFC1R1-201ENST00000248089 WDR18Q9BV38 432 aa25.49■■□□□ 1.67
HCFC1R1-201ENST00000248089 GINM1Q9NU53 330 aa25.49■■□□□ 1.67
HCFC1R1-201ENST00000248089 PNMA3Q9UL41 463 aa25.49■■□□□ 1.67
HCFC1R1-201ENST00000248089 PTCH2Q9Y6C5 1203 aa25.49■■□□□ 1.67
HCFC1R1-201ENST00000248089 TTC41PQ6P2S7 1318 aa25.48■■□□□ 1.67
HCFC1R1-201ENST00000248089 BCRP11274 1271 aa25.48■■□□□ 1.67
HCFC1R1-201ENST00000248089 PSMC4P43686 418 aa25.48■■□□□ 1.67
HCFC1R1-201ENST00000248089 TATDN1Q6P1N9 297 aa25.48■■□□□ 1.67
HCFC1R1-201ENST00000248089 CYP2D6P10635 497 aa25.47■■□□□ 1.67
HCFC1R1-201ENST00000248089 RGS19P49795 217 aa25.47■■□□□ 1.67
HCFC1R1-201ENST00000248089 MLLT1Q03111 559 aaPredicted RBP25.47■■□□□ 1.67
HCFC1R1-201ENST00000248089 CERKLQ49MI3 558 aaPredicted RBP25.47■■□□□ 1.67
HCFC1R1-201ENST00000248089 KBTBD3Q8NAB2 608 aa25.47■■□□□ 1.67
HCFC1R1-201ENST00000248089 TMOD4Q9NZQ9 345 aa25.47■■□□□ 1.67
HCFC1R1-201ENST00000248089 ERC2O15083 957 aa25.46■■□□□ 1.67
HCFC1R1-201ENST00000248089 FMNL1O95466 1100 aaPredicted RBP25.46■■□□□ 1.67
HCFC1R1-201ENST00000248089 CTGFP29279 349 aa25.46■■□□□ 1.67
HCFC1R1-201ENST00000248089 SHMT1P34896 483 aa25.46■■□□□ 1.67
HCFC1R1-201ENST00000248089 BACE1P56817 501 aa25.46■■□□□ 1.67
HCFC1R1-201ENST00000248089 PABPC4Q13310 644 aaKnown RBP eCLIP25.46■■□□□ 1.677e-24■■■■■ 32.7
HCFC1R1-201ENST00000248089 RAB3GAP1Q15042 981 aa25.46■■□□□ 1.67
HCFC1R1-201ENST00000248089 ABCB5Q2M3G0 1257 aa25.46■■□□□ 1.67
HCFC1R1-201ENST00000248089 SH3D19Q5HYK7 790 aa25.46■■□□□ 1.67
HCFC1R1-201ENST00000248089 ANKRD45Q5TZF3 282 aa25.46■■□□□ 1.67
HCFC1R1-201ENST00000248089 TRIM47Q96LD4 638 aa25.46■■□□□ 1.67
HCFC1R1-201ENST00000248089 PUS7LQ9H0K6 701 aaKnown RBP25.46■■□□□ 1.67
HCFC1R1-201ENST00000248089 ATP8A2Q9NTI2 1148 aa25.46■■□□□ 1.67
HCFC1R1-201ENST00000248089 SLC4A4Q9Y6R1 1079 aa25.46■■□□□ 1.67
HCFC1R1-201ENST00000248089 USP17L10C9JJH3 530 aa25.45■■□□□ 1.66
HCFC1R1-201ENST00000248089 GNRH1P01148 92 aa25.45■■□□□ 1.66
HCFC1R1-201ENST00000248089 MX1P20591 662 aa25.45■■□□□ 1.66
HCFC1R1-201ENST00000248089 HDAC1Q13547 482 aaPredicted RBP25.45■■□□□ 1.66
HCFC1R1-201ENST00000248089 SLC9C1Q4G0N8 1177 aa25.45■■□□□ 1.66
HCFC1R1-201ENST00000248089 DDRGK1Q96HY6 314 aa25.45■■□□□ 1.66
HCFC1R1-201ENST00000248089 FEZ1Q99689 392 aa25.45■■□□□ 1.66
HCFC1R1-201ENST00000248089 RBBP6Q7Z6E9 1792 aaKnown RBP25.44■■□□□ 1.66
HCFC1R1-201ENST00000248089 OSBPP22059 807 aa25.44■■□□□ 1.66
HCFC1R1-201ENST00000248089 AMOTL1Q8IY63 956 aa25.44■■□□□ 1.66
HCFC1R1-201ENST00000248089 PI4K2BQ8TCG2 481 aa25.44■■□□□ 1.66
HCFC1R1-201ENST00000248089 GCC1Q96CN9 775 aa25.44■■□□□ 1.66
HCFC1R1-201ENST00000248089 CABP5Q9NP86 173 aa25.44■■□□□ 1.66
HCFC1R1-201ENST00000248089 TNRC18O15417 2968 aaPredicted RBP25.44■■□□□ 1.66
HCFC1R1-201ENST00000248089 C19orf81C9J6K1 198 aa25.43■■□□□ 1.66
HCFC1R1-201ENST00000248089 MPHOSPH10O00566 681 aaKnown RBP25.43■■□□□ 1.66
HCFC1R1-201ENST00000248089 GLRX3O76003 335 aaKnown RBP25.43■■□□□ 1.66
HCFC1R1-201ENST00000248089 FCGRTP55899 365 aa25.43■■□□□ 1.66
HCFC1R1-201ENST00000248089 GABPAQ06546 454 aa25.43■■□□□ 1.66
HCFC1R1-201ENST00000248089 ZYXQ15942 572 aaKnown RBP25.43■■□□□ 1.66
HCFC1R1-201ENST00000248089 ANKRD13CQ8N6S4 541 aa25.43■■□□□ 1.66
HCFC1R1-201ENST00000248089 SLC44A5Q8NCS7 719 aa25.43■■□□□ 1.66
HCFC1R1-201ENST00000248089 EXOC6Q8TAG9 804 aa25.43■■□□□ 1.66
HCFC1R1-201ENST00000248089 ASCC2Q9H1I8 757 aaPredicted RBP25.43■■□□□ 1.66
HCFC1R1-201ENST00000248089 MYPNQ86TC9 1320 aa25.42■■□□□ 1.66
HCFC1R1-201ENST00000248089 CYP2D7A0A087X1C5 515 aa25.42■■□□□ 1.66
HCFC1R1-201ENST00000248089 RNF113AO15541 343 aaKnown RBP25.42■■□□□ 1.66
HCFC1R1-201ENST00000248089 HOXD10P28358 340 aa25.42■■□□□ 1.66
HCFC1R1-201ENST00000248089 IRX3P78415 501 aaPredicted RBP25.42■■□□□ 1.66
HCFC1R1-201ENST00000248089 AAMPQ13685 434 aa25.42■■□□□ 1.66
HCFC1R1-201ENST00000248089 DYNLL2Q96FJ2 89 aa25.42■■□□□ 1.66
HCFC1R1-201ENST00000248089 APPBP2Q92624 585 aa25.41■■□□□ 1.66
HCFC1R1-201ENST00000248089 ARMC5Q96C12 935 aa25.41■■□□□ 1.66
HCFC1R1-201ENST00000248089 FSD1Q9BTV5 496 aa25.41■■□□□ 1.66
HCFC1R1-201ENST00000248089 SRRDQ9UH36 339 aa25.41■■□□□ 1.66
HCFC1R1-201ENST00000248089 USP17L12C9JPN9 530 aa25.4■■□□□ 1.66
HCFC1R1-201ENST00000248089 USP17L21D6R901 530 aa25.4■■□□□ 1.66
HCFC1R1-201ENST00000248089 ZFYP08048 801 aaPredicted RBP25.4■■□□□ 1.66
HCFC1R1-201ENST00000248089 PRMT2P55345 433 aa25.4■■□□□ 1.66
HCFC1R1-201ENST00000248089 USP17L2Q6R6M4 530 aa25.4■■□□□ 1.66
HCFC1R1-201ENST00000248089 SH3TC2Q8TF17 1288 aa25.4■■□□□ 1.66
HCFC1R1-201ENST00000248089 OSBP2Q969R2 916 aa25.4■■□□□ 1.66
HCFC1R1-201ENST00000248089 SWAP70Q9UH65 585 aa25.4■■□□□ 1.66
HCFC1R1-201ENST00000248089 SUPT16HQ9Y5B9 1047 aaKnown RBP25.4■■□□□ 1.66
HCFC1R1-201ENST00000248089 MYCP01106 439 aaPredicted RBP25.39■■□□□ 1.66
HCFC1R1-201ENST00000248089 SEPT2Q15019 361 aa25.39■■□□□ 1.66
HCFC1R1-201ENST00000248089 FAM110CQ1W6H9 321 aa25.39■■□□□ 1.66
HCFC1R1-201ENST00000248089 LRRFIP1Q32MZ4 808 aaKnown RBP25.39■■□□□ 1.66
HCFC1R1-201ENST00000248089 NBPF11Q86T75 865 aa25.39■■□□□ 1.66
HCFC1R1-201ENST00000248089 RAET1EQ8TD07 263 aa25.39■■□□□ 1.66
HCFC1R1-201ENST00000248089 DOCK3Q8IZD9 2030 aa25.39■■□□□ 1.65
HCFC1R1-201ENST00000248089 SALL3Q9BXA9 1300 aa25.38■■□□□ 1.65
HCFC1R1-201ENST00000248089 SMIM22K7EJ46 135 aa25.38■■□□□ 1.65
HCFC1R1-201ENST00000248089 GCLCP48506 637 aaPredicted RBP25.38■■□□□ 1.65
HCFC1R1-201ENST00000248089 PRKCZQ05513 592 aa25.38■■□□□ 1.65
HCFC1R1-201ENST00000248089 C12orf60Q5U649 245 aa25.38■■□□□ 1.65
HCFC1R1-201ENST00000248089 ACER1Q8TDN7 264 aa25.38■■□□□ 1.65
HCFC1R1-201ENST00000248089 ZNF333Q96JL9 665 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms