RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 GNL3LQ9NVN8 582 aaKnown RBP10.38□□□□□ -0.75
IFT43-201ENST00000238628 DDX20Q9UHI6 824 aaKnown RBP10.38□□□□□ -0.75
IFT43-201ENST00000238628 LRRFIP2Q9Y608 721 aaKnown RBP10.38□□□□□ -0.75
IFT43-201ENST00000238628 MYH2Q9UKX2 1941 aa10.38□□□□□ -0.75
IFT43-201ENST00000238628 PHF20L1A8MW92 1017 aa10.37□□□□□ -0.75
IFT43-201ENST00000238628 PRR33A8MZF0 331 aa10.37□□□□□ -0.75
IFT43-201ENST00000238628 MSCO60682 206 aa10.37□□□□□ -0.75
IFT43-201ENST00000238628 MYCNP04198 464 aaPredicted RBP10.37□□□□□ -0.75
IFT43-201ENST00000238628 PRDX5P30044 214 aa10.37□□□□□ -0.75
IFT43-201ENST00000238628 PBX2P40425 430 aa10.37□□□□□ -0.75
IFT43-201ENST00000238628 RGS2P41220 211 aa10.37□□□□□ -0.75
IFT43-201ENST00000238628 FOXK2Q01167 660 aa10.37□□□□□ -0.75
IFT43-201ENST00000238628 FPGSQ05932 587 aa10.37□□□□□ -0.75
IFT43-201ENST00000238628 MFSD14CQ5VZR4 134 aa10.37□□□□□ -0.75
IFT43-201ENST00000238628 MRPL50Q8N5N7 158 aaKnown RBP10.37□□□□□ -0.75
IFT43-201ENST00000238628 PROCA1Q8NCQ7 364 aaPredicted RBP10.37□□□□□ -0.75
IFT43-201ENST00000238628 PBX4Q9BYU1 374 aa10.37□□□□□ -0.75
IFT43-201ENST00000238628 USP44Q9H0E7 712 aa10.37□□□□□ -0.75
IFT43-201ENST00000238628 TACC3Q9Y6A5 838 aa10.37□□□□□ -0.75
IFT43-201ENST00000238628 PLXNB2O15031 1838 aa10.37□□□□□ -0.75
IFT43-201ENST00000238628 DOCK2Q92608 1830 aa10.36□□□□□ -0.75
IFT43-201ENST00000238628 KBTBD13C9JR72 458 aa10.36□□□□□ -0.75
IFT43-201ENST00000238628 PI4K2BG5E9Z4 385 aa10.36□□□□□ -0.75
IFT43-201ENST00000238628 ENTPD3O75355 529 aa10.36□□□□□ -0.75
IFT43-201ENST00000238628 RAG1P15918 1043 aa10.36□□□□□ -0.75
IFT43-201ENST00000238628 ITGB8P26012 769 aa10.36□□□□□ -0.75
IFT43-201ENST00000238628 RFX5P48382 616 aaPredicted RBP10.36□□□□□ -0.75
IFT43-201ENST00000238628 RGS3P49796 1198 aa10.36□□□□□ -0.75
IFT43-201ENST00000238628 CCDC84Q86UT8 332 aaPredicted RBP10.36□□□□□ -0.75
IFT43-201ENST00000238628 ZSCAN29Q8IWY8 852 aaPredicted RBP10.36□□□□□ -0.75
IFT43-201ENST00000238628 ARRDC4Q8NCT1 418 aa10.36□□□□□ -0.75
IFT43-201ENST00000238628 ASCC2Q9H1I8 757 aaPredicted RBP10.36□□□□□ -0.75
IFT43-201ENST00000238628 MORF4L1Q9UBU8 362 aa10.36□□□□□ -0.75
IFT43-201ENST00000238628 DENND2AQ9ULE3 1009 aa10.36□□□□□ -0.75
IFT43-201ENST00000238628 PTPRFP10586 1907 aa10.36□□□□□ -0.75
IFT43-201ENST00000238628 GRXCR1A8MXD5 290 aa10.35□□□□□ -0.75
IFT43-201ENST00000238628 ERC2O15083 957 aa10.35□□□□□ -0.75
IFT43-201ENST00000238628 CTNND1O60716 968 aaKnown RBP10.35□□□□□ -0.75
IFT43-201ENST00000238628 TLE2Q04725 743 aa10.35□□□□□ -0.75
IFT43-201ENST00000238628 ATP2B3Q16720 1220 aa10.35□□□□□ -0.75
IFT43-201ENST00000238628 ATG9AQ7Z3C6 839 aa10.35□□□□□ -0.75
IFT43-201ENST00000238628 GPRC5AQ8NFJ5 357 aa10.35□□□□□ -0.75
IFT43-201ENST00000238628 FBXL18Q96ME1 805 aa10.35□□□□□ -0.75
IFT43-201ENST00000238628 APBA2Q99767 749 aa10.35□□□□□ -0.75
IFT43-201ENST00000238628 IDI2Q9BXS1 227 aa10.35□□□□□ -0.75
IFT43-201ENST00000238628 CWC22Q9HCG8 908 aaKnown RBP10.35□□□□□ -0.75
IFT43-201ENST00000238628 CEP126Q9P2H0 1117 aa10.35□□□□□ -0.75
IFT43-201ENST00000238628 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.35□□□□□ -0.75
IFT43-201ENST00000238628 MSRAQ9UJ68 235 aa10.35□□□□□ -0.75
IFT43-201ENST00000238628 PTPRCP08575 1304 aa10.34□□□□□ -0.75
IFT43-201ENST00000238628 SALL1Q9NSC2 1324 aa10.34□□□□□ -0.75
IFT43-201ENST00000238628 DNAH12Q6ZR08 3092 aa10.34□□□□□ -0.75
IFT43-201ENST00000238628 SEMA3EO15041 775 aa10.34□□□□□ -0.75
IFT43-201ENST00000238628 PEX10O60683 326 aa10.34□□□□□ -0.75
IFT43-201ENST00000238628 CLTBP09497 229 aa10.34□□□□□ -0.75
IFT43-201ENST00000238628 MAPK4P31152 587 aa10.34□□□□□ -0.75
IFT43-201ENST00000238628 MAP3K10Q02779 954 aa10.34□□□□□ -0.75
IFT43-201ENST00000238628 SNX17Q15036 470 aa10.34□□□□□ -0.75
IFT43-201ENST00000238628 CSPP1Q1MSJ5 1256 aa10.34□□□□□ -0.75
IFT43-201ENST00000238628 SH3BP5LQ7L8J4 393 aa10.34□□□□□ -0.75
IFT43-201ENST00000238628 FAM9BQ8IZU0 186 aa10.34□□□□□ -0.75
IFT43-201ENST00000238628 ZGPATQ8N5A5 531 aaKnown RBP10.34□□□□□ -0.75
IFT43-201ENST00000238628 HERVK_113Q902F9 699 aa10.34□□□□□ -0.75
IFT43-201ENST00000238628 USP6NLQ92738 828 aa10.34□□□□□ -0.75
IFT43-201ENST00000238628 FERMT2Q96AC1 680 aa10.34□□□□□ -0.75
IFT43-201ENST00000238628 SIL1Q9H173 461 aa10.34□□□□□ -0.75
IFT43-201ENST00000238628 PHIPQ8WWQ0 1821 aa10.34□□□□□ -0.75
IFT43-201ENST00000238628 DOCK1Q14185 1865 aa10.34□□□□□ -0.75
IFT43-201ENST00000238628 PLXNA1Q9UIW2 1896 aa10.34□□□□□ -0.75
IFT43-201ENST00000238628 FRMPD3Q5JV73 1810 aa10.33□□□□□ -0.76
IFT43-201ENST00000238628 RLFQ13129 1914 aa10.33□□□□□ -0.76
IFT43-201ENST00000238628 DDTLA6NHG4 134 aaPredicted RBP10.33□□□□□ -0.76
IFT43-201ENST00000238628 ANP32CO43423 234 aa10.33□□□□□ -0.76
IFT43-201ENST00000238628 TLL1O43897 1013 aa10.33□□□□□ -0.76
IFT43-201ENST00000238628 ST18O60284 1047 aa10.33□□□□□ -0.76
IFT43-201ENST00000238628 ABCB7O75027 752 aa10.33□□□□□ -0.76
IFT43-201ENST00000238628 SLURP2P0DP57 97 aa10.33□□□□□ -0.76
IFT43-201ENST00000238628 ADCYAP1R1P41586 468 aa10.33□□□□□ -0.76
IFT43-201ENST00000238628 PHKA1P46020 1223 aa10.33□□□□□ -0.76
IFT43-201ENST00000238628 HMGCS2P54868 508 aa10.33□□□□□ -0.76
IFT43-201ENST00000238628 IRX3P78415 501 aaPredicted RBP10.33□□□□□ -0.76
IFT43-201ENST00000238628 SPP2Q13103 211 aa10.33□□□□□ -0.76
IFT43-201ENST00000238628 PICALMQ13492 652 aa10.33□□□□□ -0.76
IFT43-201ENST00000238628 GPR142Q7Z601 462 aa10.33□□□□□ -0.76
IFT43-201ENST00000238628 PLEKHH3Q7Z736 793 aa10.33□□□□□ -0.76
IFT43-201ENST00000238628 SLF2Q8IX21 1173 aa10.33□□□□□ -0.76
IFT43-201ENST00000238628 EDC3Q96F86 508 aaKnown RBP10.33□□□□□ -0.76
IFT43-201ENST00000238628 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.33□□□□□ -0.76
IFT43-201ENST00000238628 KCNH6Q9H252 994 aa10.33□□□□□ -0.76
IFT43-201ENST00000238628 SLC28A3Q9HAS3 691 aa10.33□□□□□ -0.76
IFT43-201ENST00000238628 ABCF2Q9UG63 623 aa10.33□□□□□ -0.76
IFT43-201ENST00000238628 FBXO3Q9UK99 471 aa10.33□□□□□ -0.76
IFT43-201ENST00000238628 ATRNL1Q5VV63 1379 aa10.33□□□□□ -0.76
IFT43-201ENST00000238628 KIAA0355O15063 1070 aa10.32□□□□□ -0.76
IFT43-201ENST00000238628 NPM3O75607 178 aaKnown RBP10.32□□□□□ -0.76
IFT43-201ENST00000238628 CIAO1O76071 339 aa10.32□□□□□ -0.76
IFT43-201ENST00000238628 ATP2B2Q01814 1243 aa10.32□□□□□ -0.76
IFT43-201ENST00000238628 MAP2K5Q13163 448 aa10.32□□□□□ -0.76
IFT43-201ENST00000238628 RAB30Q15771 203 aa10.32□□□□□ -0.76
IFT43-201ENST00000238628 MORN1Q5T089 497 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms