RNA–Protein interactions for RNA: ENST00000237889.8

NDUFB3-201, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB3, Length 755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-201ENST00000237889 SNX17Q15036 470 aa12.09□□□□□ -0.47
NDUFB3-201ENST00000237889 DIXDC1Q155Q3 683 aa12.09□□□□□ -0.47
NDUFB3-201ENST00000237889 TRIM43Q96BQ3 446 aaPredicted RBP12.09□□□□□ -0.47
NDUFB3-201ENST00000237889 EPHX3Q9H6B9 360 aa12.09□□□□□ -0.47
NDUFB3-201ENST00000237889 MSRAQ9UJ68 235 aa12.09□□□□□ -0.47
NDUFB3-201ENST00000237889 IVNS1ABPQ9Y6Y0 642 aa12.09□□□□□ -0.47
NDUFB3-201ENST00000237889 CDH23Q9H251 3354 aa12.09□□□□□ -0.47
NDUFB3-201ENST00000237889 C19orf81C9J6K1 198 aa12.08□□□□□ -0.48
NDUFB3-201ENST00000237889 GRM8O00222 908 aa12.08□□□□□ -0.48
NDUFB3-201ENST00000237889 CLTBP09497 229 aa12.08□□□□□ -0.48
NDUFB3-201ENST00000237889 MRE11P49959 708 aa12.08□□□□□ -0.48
NDUFB3-201ENST00000237889 ERVK-9P63128 1117 aa12.08□□□□□ -0.48
NDUFB3-201ENST00000237889 ERVK-24P63145 666 aa12.08□□□□□ -0.48
NDUFB3-201ENST00000237889 TLE2Q04725 743 aa12.08□□□□□ -0.48
NDUFB3-201ENST00000237889 SKIV2LQ15477 1246 aaKnown RBP12.08□□□□□ -0.48
NDUFB3-201ENST00000237889 G2E3Q7L622 706 aa12.08□□□□□ -0.48
NDUFB3-201ENST00000237889 ZGPATQ8N5A5 531 aaKnown RBP12.08□□□□□ -0.48
NDUFB3-201ENST00000237889 TSPYL6Q8N831 410 aa12.08□□□□□ -0.48
NDUFB3-201ENST00000237889 NECAB3Q96P71 396 aaPredicted RBP12.08□□□□□ -0.48
NDUFB3-201ENST00000237889 PUS3Q9BZE2 481 aaKnown RBP12.08□□□□□ -0.48
NDUFB3-201ENST00000237889 SPEF2Q9C093 1822 aa12.08□□□□□ -0.48
NDUFB3-201ENST00000237889 ATRNL1Q5VV63 1379 aa12.07□□□□□ -0.48
NDUFB3-201ENST00000237889 ADCYAP1R1P41586 468 aa12.07□□□□□ -0.48
NDUFB3-201ENST00000237889 PUM3Q15397 648 aaKnown RBP12.07□□□□□ -0.48
NDUFB3-201ENST00000237889 RAB30Q15771 203 aa12.07□□□□□ -0.48
NDUFB3-201ENST00000237889 TWISTNBQ3B726 338 aaPredicted RBP12.07□□□□□ -0.48
NDUFB3-201ENST00000237889 WDR78Q5VTH9 848 aa12.07□□□□□ -0.48
NDUFB3-201ENST00000237889 SH3RF1Q7Z6J0 888 aa12.07□□□□□ -0.48
NDUFB3-201ENST00000237889 CCDC84Q86UT8 332 aaPredicted RBP12.07□□□□□ -0.48
NDUFB3-201ENST00000237889 HERVK_113Q902F9 699 aa12.07□□□□□ -0.48
NDUFB3-201ENST00000237889 PAGR1Q9BTK6 254 aa12.07□□□□□ -0.48
NDUFB3-201ENST00000237889 TMEM39AQ9NV64 488 aa12.07□□□□□ -0.48
NDUFB3-201ENST00000237889 RBPJLQ9UBG7 517 aa12.07□□□□□ -0.48
NDUFB3-201ENST00000237889 MYH3P11055 1940 aa12.06□□□□□ -0.48
NDUFB3-201ENST00000237889 DDTLA6NHG4 134 aaPredicted RBP12.06□□□□□ -0.48
NDUFB3-201ENST00000237889 SLC15A5A6NIM6 579 aa12.06□□□□□ -0.48
NDUFB3-201ENST00000237889 KIAA0355O15063 1070 aa12.06□□□□□ -0.48
NDUFB3-201ENST00000237889 SLC5A1P13866 664 aa12.06□□□□□ -0.48
NDUFB3-201ENST00000237889 CAP2P40123 477 aa12.06□□□□□ -0.48
NDUFB3-201ENST00000237889 BACE1P56817 501 aa12.06□□□□□ -0.48
NDUFB3-201ENST00000237889 PICALMQ13492 652 aa12.06□□□□□ -0.48
NDUFB3-201ENST00000237889 EPHA10Q5JZY3 1008 aa12.06□□□□□ -0.48
NDUFB3-201ENST00000237889 WDR18Q9BV38 432 aa12.06□□□□□ -0.48
NDUFB3-201ENST00000237889 PORCNQ9H237 461 aa12.06□□□□□ -0.48
NDUFB3-201ENST00000237889 MTIF3Q9H2K0 278 aaKnown RBP12.06□□□□□ -0.48
NDUFB3-201ENST00000237889 SLC28A3Q9HAS3 691 aa12.06□□□□□ -0.48
NDUFB3-201ENST00000237889 TXNRD2Q9NNW7 524 aa12.06□□□□□ -0.48
NDUFB3-201ENST00000237889 ADAMTS8Q9UP79 889 aa12.06□□□□□ -0.48
NDUFB3-201ENST00000237889 DNAH12Q6ZR08 3092 aa12.06□□□□□ -0.48
NDUFB3-201ENST00000237889 DCDC2CA8MYV0 355 aa12.05□□□□□ -0.48
NDUFB3-201ENST00000237889 SMIM22K7EJ46 135 aa12.05□□□□□ -0.48
NDUFB3-201ENST00000237889 HOXC6P09630 235 aa12.05□□□□□ -0.48
NDUFB3-201ENST00000237889 PRDX5P30044 214 aa12.05□□□□□ -0.48
NDUFB3-201ENST00000237889 MTMR2Q13614 643 aa12.05□□□□□ -0.48
NDUFB3-201ENST00000237889 Q3C1V9 767 aa12.05□□□□□ -0.48
NDUFB3-201ENST00000237889 SH3BP5LQ7L8J4 393 aa12.05□□□□□ -0.48
NDUFB3-201ENST00000237889 FERMT2Q96AC1 680 aa12.05□□□□□ -0.48
NDUFB3-201ENST00000237889 PBX4Q9BYU1 374 aa12.05□□□□□ -0.48
NDUFB3-201ENST00000237889 SLC5A4Q9NY91 659 aa12.05□□□□□ -0.48
NDUFB3-201ENST00000237889 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.05□□□□□ -0.48
NDUFB3-201ENST00000237889 RABGAP1Q9Y3P9 1069 aa12.05□□□□□ -0.48
NDUFB3-201ENST00000237889 ERC2O15083 957 aa12.04□□□□□ -0.48
NDUFB3-201ENST00000237889 SEPT4O43236 478 aa12.04□□□□□ -0.48
NDUFB3-201ENST00000237889 ASNSP08243 561 aa12.04□□□□□ -0.48
NDUFB3-201ENST00000237889 PTPREP23469 700 aa12.04□□□□□ -0.48
NDUFB3-201ENST00000237889 CYP2C19P33261 490 aa12.04□□□□□ -0.48
NDUFB3-201ENST00000237889 EPHB4P54760 987 aa12.04□□□□□ -0.48
NDUFB3-201ENST00000237889 BEND3Q5T5X7 828 aa12.04□□□□□ -0.48
NDUFB3-201ENST00000237889 DPP9Q86TI2 863 aa12.04□□□□□ -0.48
NDUFB3-201ENST00000237889 DZIP1Q86YF9 867 aaKnown RBP12.04□□□□□ -0.48
NDUFB3-201ENST00000237889 SLC44A5Q8NCS7 719 aa12.04□□□□□ -0.48
NDUFB3-201ENST00000237889 LPIN2Q92539 896 aa12.04□□□□□ -0.48
NDUFB3-201ENST00000237889 DENND2AQ9ULE3 1009 aa12.04□□□□□ -0.48
NDUFB3-201ENST00000237889 COG5Q9UP83 839 aa12.04□□□□□ -0.48
NDUFB3-201ENST00000237889 C19orf67A6NJJ6 358 aa12.03□□□□□ -0.48
NDUFB3-201ENST00000237889 USP17L10C9JJH3 530 aa12.03□□□□□ -0.48
NDUFB3-201ENST00000237889 SEMA3EO15041 775 aa12.03□□□□□ -0.48
NDUFB3-201ENST00000237889 GTPBP6O43824 516 aaPredicted RBP12.03□□□□□ -0.48
NDUFB3-201ENST00000237889 PQBP1O60828 265 aaKnown RBP12.03□□□□□ -0.48
NDUFB3-201ENST00000237889 MAP4K4O95819 1239 aaPredicted RBP12.03□□□□□ -0.48
NDUFB3-201ENST00000237889 PPIGQ13427 754 aaKnown RBP eCLIP12.03□□□□□ -0.48
NDUFB3-201ENST00000237889 ADGRE1Q14246 886 aa12.03□□□□□ -0.48
NDUFB3-201ENST00000237889 SPTY2D1Q68D10 685 aaPredicted RBP12.03□□□□□ -0.48
NDUFB3-201ENST00000237889 RNF180Q86T96 592 aa12.03□□□□□ -0.48
NDUFB3-201ENST00000237889 MICALL1Q8N3F8 863 aa12.03□□□□□ -0.48
NDUFB3-201ENST00000237889 KCNH6Q9H252 994 aa12.03□□□□□ -0.48
NDUFB3-201ENST00000237889 HERC5Q9UII4 1024 aaKnown RBP12.03□□□□□ -0.48
NDUFB3-201ENST00000237889 PRR33A8MZF0 331 aa12.02□□□□□ -0.49
NDUFB3-201ENST00000237889 APAF1O14727 1248 aa12.02□□□□□ -0.49
NDUFB3-201ENST00000237889 ALDH1L1O75891 902 aa12.02□□□□□ -0.49
NDUFB3-201ENST00000237889 CYBAP13498 195 aa12.02□□□□□ -0.49
NDUFB3-201ENST00000237889 FOXK2Q01167 660 aa12.02□□□□□ -0.49
NDUFB3-201ENST00000237889 TFF2Q03403 129 aa12.02□□□□□ -0.49
NDUFB3-201ENST00000237889 DDX10Q13206 875 aaKnown RBP12.02□□□□□ -0.49
NDUFB3-201ENST00000237889 LRRC24Q50LG9 513 aa12.02□□□□□ -0.49
NDUFB3-201ENST00000237889 OLFML2BQ68BL8 750 aa12.02□□□□□ -0.49
NDUFB3-201ENST00000237889 FAM163AQ96GL9 167 aaPredicted RBP12.02□□□□□ -0.49
NDUFB3-201ENST00000237889 TOX2Q96NM4 488 aa12.02□□□□□ -0.49
NDUFB3-201ENST00000237889 GINM1Q9NU53 330 aa12.02□□□□□ -0.49
NDUFB3-201ENST00000237889 FLRT1Q9NZU1 646 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms