RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 DDX60LQ5H9U9 1706 aaKnown RBP18.53■□□□□ 0.56
ITGA4-201ENST00000233573 ROBO3Q96MS0 1386 aa18.52■□□□□ 0.56
ITGA4-201ENST00000233573 C21orf2O43822 256 aa18.52■□□□□ 0.56
ITGA4-201ENST00000233573 USP17L8P0C7I0 530 aa18.52■□□□□ 0.56
ITGA4-201ENST00000233573 CCDC192P0DO97 292 aa18.52■□□□□ 0.56
ITGA4-201ENST00000233573 FUT2Q10981 343 aa18.52■□□□□ 0.56
ITGA4-201ENST00000233573 TROAPQ12815 778 aa18.52■□□□□ 0.56
ITGA4-201ENST00000233573 C12orf60Q5U649 245 aa18.52■□□□□ 0.56
ITGA4-201ENST00000233573 RTN4Q9NQC3 1192 aaKnown RBP18.52■□□□□ 0.56
ITGA4-201ENST00000233573 KCNQ5Q9NR82 932 aa18.52■□□□□ 0.56
ITGA4-201ENST00000233573 FAM205AQ6ZU69 1335 aa18.52■□□□□ 0.56
ITGA4-201ENST00000233573 MYH6P13533 1939 aa18.52■□□□□ 0.55
ITGA4-201ENST00000233573 A0A1W2PQ27 194 aa18.51■□□□□ 0.55
ITGA4-201ENST00000233573 A0A1W2PQ64 194 aa18.51■□□□□ 0.55
ITGA4-201ENST00000233573 A0A1W2PQD8 194 aa18.51■□□□□ 0.55
ITGA4-201ENST00000233573 LDHCP07864 332 aa18.51■□□□□ 0.55
ITGA4-201ENST00000233573 DPEP1P16444 411 aa18.51■□□□□ 0.55
ITGA4-201ENST00000233573 ME1P48163 572 aa18.51■□□□□ 0.55
ITGA4-201ENST00000233573 R3HDM1Q15032 1099 aaKnown RBP18.51■□□□□ 0.55
ITGA4-201ENST00000233573 IFIT1BQ5T764 474 aaKnown RBP18.51■□□□□ 0.55
ITGA4-201ENST00000233573 ANO1Q5XXA6 986 aa18.51■□□□□ 0.55
ITGA4-201ENST00000233573 CERS5Q8N5B7 392 aa18.51■□□□□ 0.55
ITGA4-201ENST00000233573 KCNG4Q8TDN1 519 aa18.51■□□□□ 0.55
ITGA4-201ENST00000233573 NUP133Q8WUM0 1156 aa18.51■□□□□ 0.55
ITGA4-201ENST00000233573 MCM9Q9NXL9 1143 aa18.51■□□□□ 0.55
ITGA4-201ENST00000233573 SNED1Q8TER0 1413 aa18.51■□□□□ 0.55
ITGA4-201ENST00000233573 DEXIO95424 95 aa18.51■□□□□ 0.55
ITGA4-201ENST00000233573 SLC3A2P08195 630 aaKnown RBP18.51■□□□□ 0.55
ITGA4-201ENST00000233573 SLC4A8Q2Y0W8 1093 aa18.51■□□□□ 0.55
ITGA4-201ENST00000233573 TRIM22Q8IYM9 498 aa18.51■□□□□ 0.55
ITGA4-201ENST00000233573 CMTR1Q8N1G2 835 aaKnown RBP18.51■□□□□ 0.55
ITGA4-201ENST00000233573 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.51■□□□□ 0.55
ITGA4-201ENST00000233573 MRVI1Q9Y6F6 885 aa18.51■□□□□ 0.55
ITGA4-201ENST00000233573 GPR75-ASB3A0A0A6YYF3 556 aa18.5■□□□□ 0.55
ITGA4-201ENST00000233573 F8W031 263 aaPredicted RBP18.5■□□□□ 0.55
ITGA4-201ENST00000233573 G3V3G9 751 aa18.5■□□□□ 0.55
ITGA4-201ENST00000233573 BAG3O95817 575 aa18.5■□□□□ 0.55
ITGA4-201ENST00000233573 KCNA3P22001 575 aa18.5■□□□□ 0.55
ITGA4-201ENST00000233573 FAM160A1Q05DH4 1040 aa18.5■□□□□ 0.55
ITGA4-201ENST00000233573 DCAF8Q5TAQ9 597 aa18.5■□□□□ 0.55
ITGA4-201ENST00000233573 CKAP2LQ8IYA6 745 aa18.5■□□□□ 0.55
ITGA4-201ENST00000233573 TRIM44Q96DX7 344 aaPredicted RBP18.5■□□□□ 0.55
ITGA4-201ENST00000233573 FAM163AQ96GL9 167 aaPredicted RBP18.5■□□□□ 0.55
ITGA4-201ENST00000233573 EYA3Q99504 573 aa18.5■□□□□ 0.55
ITGA4-201ENST00000233573 SPTLC2O15270 562 aa18.5■□□□□ 0.55
ITGA4-201ENST00000233573 MMP1P03956 469 aa18.5■□□□□ 0.55
ITGA4-201ENST00000233573 TYRO3Q06418 890 aa18.5■□□□□ 0.55
ITGA4-201ENST00000233573 PDE4BQ07343 736 aa18.5■□□□□ 0.55
ITGA4-201ENST00000233573 TRIM29Q14134 588 aa18.5■□□□□ 0.55
ITGA4-201ENST00000233573 STK38Q15208 465 aa18.5■□□□□ 0.55
ITGA4-201ENST00000233573 TBC1D22AQ8WUA7 517 aa18.5■□□□□ 0.55
ITGA4-201ENST00000233573 RNF26Q9BY78 433 aaPredicted RBP18.5■□□□□ 0.55
ITGA4-201ENST00000233573 SCN9AQ15858 1988 aa18.49■□□□□ 0.55
ITGA4-201ENST00000233573 NMT2O60551 498 aa18.49■□□□□ 0.55
ITGA4-201ENST00000233573 DDAH1O94760 285 aa18.49■□□□□ 0.55
ITGA4-201ENST00000233573 NT5C2P49902 561 aa18.49■□□□□ 0.55
ITGA4-201ENST00000233573 SLC39A14Q15043 492 aa18.49■□□□□ 0.55
ITGA4-201ENST00000233573 FAM47AQ5JRC9 791 aa18.49■□□□□ 0.55
ITGA4-201ENST00000233573 AXDND1Q5T1B0 1012 aaPredicted RBP18.49■□□□□ 0.55
ITGA4-201ENST00000233573 CATIPQ7Z7H3 387 aa18.49■□□□□ 0.55
ITGA4-201ENST00000233573 CERS3Q8IU89 383 aa18.49■□□□□ 0.55
ITGA4-201ENST00000233573 MAP3K14Q99558 947 aa18.49■□□□□ 0.55
ITGA4-201ENST00000233573 KIF13BQ9NQT8 1826 aa18.49■□□□□ 0.55
ITGA4-201ENST00000233573 ADAMTSL1Q8N6G6 1762 aa18.48■□□□□ 0.55
ITGA4-201ENST00000233573 GAKO14976 1311 aa18.48■□□□□ 0.55
ITGA4-201ENST00000233573 CALM1P0DP23 149 aa18.48■□□□□ 0.55
ITGA4-201ENST00000233573 CALM2P0DP24 149 aa18.48■□□□□ 0.55
ITGA4-201ENST00000233573 CALM3P0DP25 149 aa18.48■□□□□ 0.55
ITGA4-201ENST00000233573 BTDP43251 543 aa18.48■□□□□ 0.55
ITGA4-201ENST00000233573 USP5P45974 858 aa18.48■□□□□ 0.55
ITGA4-201ENST00000233573 PTPAQ15257 358 aa18.48■□□□□ 0.55
ITGA4-201ENST00000233573 AOC3Q16853 763 aa18.48■□□□□ 0.55
ITGA4-201ENST00000233573 HS1BP3Q53T59 392 aa18.48■□□□□ 0.55
ITGA4-201ENST00000233573 RCSD1Q6JBY9 416 aa18.48■□□□□ 0.55
ITGA4-201ENST00000233573 CCDC73Q6ZRK6 1079 aa18.48■□□□□ 0.55
ITGA4-201ENST00000233573 FSIP1Q8NA03 581 aa18.48■□□□□ 0.55
ITGA4-201ENST00000233573 FOCADQ5VW36 1801 aa18.48■□□□□ 0.55
ITGA4-201ENST00000233573 PKN1Q16512 942 aa18.48■□□□□ 0.55
ITGA4-201ENST00000233573 FMR1NBQ8N0W7 255 aaPredicted RBP18.48■□□□□ 0.55
ITGA4-201ENST00000233573 CCDC82Q8N4S0 544 aa18.48■□□□□ 0.55
ITGA4-201ENST00000233573 TTLL6Q8N841 843 aa18.48■□□□□ 0.55
ITGA4-201ENST00000233573 MRPS27Q92552 414 aaKnown RBP18.48■□□□□ 0.55
ITGA4-201ENST00000233573 SHISA4Q96DD7 197 aa18.48■□□□□ 0.55
ITGA4-201ENST00000233573 RBM28Q9NW13 759 aaKnown RBP18.48■□□□□ 0.55
ITGA4-201ENST00000233573 ESPNB1AK53 854 aa18.47■□□□□ 0.55
ITGA4-201ENST00000233573 SF3A1Q15459 793 aaKnown RBP18.47■□□□□ 0.55
ITGA4-201ENST00000233573 TGFBRAP1Q8WUH2 860 aa18.47■□□□□ 0.55
ITGA4-201ENST00000233573 UPF1Q92900 1129 aaKnown RBP eCLIP18.47■□□□□ 0.55
ITGA4-201ENST00000233573 CTAGE5O15320 804 aa18.46■□□□□ 0.55
ITGA4-201ENST00000233573 PRPF3O43395 683 aaKnown RBP18.46■□□□□ 0.55
ITGA4-201ENST00000233573 ECE2O60344 883 aa18.46■□□□□ 0.55
ITGA4-201ENST00000233573 PLEKHA8P1O95397 391 aa18.46■□□□□ 0.55
ITGA4-201ENST00000233573 RHBDL3P58872 404 aa18.46■□□□□ 0.55
ITGA4-201ENST00000233573 NOSTRINQ8IVI9 506 aa18.46■□□□□ 0.55
ITGA4-201ENST00000233573 DYNLL2Q96FJ2 89 aa18.46■□□□□ 0.55
ITGA4-201ENST00000233573 NOL10Q9BSC4 688 aaKnown RBP18.46■□□□□ 0.55
ITGA4-201ENST00000233573 MTFR1LQ9H019 292 aa18.46■□□□□ 0.55
ITGA4-201ENST00000233573 FOXP1Q9H334 677 aaPredicted RBP18.46■□□□□ 0.55
ITGA4-201ENST00000233573 KCNJ14Q9UNX9 436 aa18.46■□□□□ 0.55
ITGA4-201ENST00000233573 PSDA5PKW4 1024 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms