RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 IFNAR1P17181 557 aa14.15□□□□□ -0.14
NUP88-201ENST00000225696 ZBTB38Q8NAP3 1195 aaPredicted RBP14.15□□□□□ -0.14
NUP88-201ENST00000225696 RGS22Q8NE09 1264 aa14.15□□□□□ -0.14
NUP88-201ENST00000225696 SPATA20Q8TB22 786 aa14.15□□□□□ -0.14
NUP88-201ENST00000225696 GOLGA1Q92805 767 aa14.15□□□□□ -0.14
NUP88-201ENST00000225696 AIDAQ96BJ3 306 aa14.15□□□□□ -0.14
NUP88-201ENST00000225696 CABP5Q9NP86 173 aa14.15□□□□□ -0.14
NUP88-201ENST00000225696 CNNM1Q9NRU3 951 aa14.15□□□□□ -0.14
NUP88-201ENST00000225696 ATRNO75882 1429 aa14.15□□□□□ -0.14
NUP88-201ENST00000225696 hCG_1642624A0A1W2PR95 340 aa14.15□□□□□ -0.15
NUP88-201ENST00000225696 GOLGA6L9A6NEM1 432 aa14.15□□□□□ -0.15
NUP88-201ENST00000225696 AKR1B15C9JRZ8 316 aaPredicted RBP14.15□□□□□ -0.15
NUP88-201ENST00000225696 RNF225M0QZC1 329 aaPredicted RBP14.15□□□□□ -0.15
NUP88-201ENST00000225696 N4BP1O75113 896 aaKnown RBP14.15□□□□□ -0.15
NUP88-201ENST00000225696 MBD4O95243 580 aa14.15□□□□□ -0.15
NUP88-201ENST00000225696 LIFRP42702 1097 aa14.15□□□□□ -0.15
NUP88-201ENST00000225696 PLCD1P51178 756 aa14.15□□□□□ -0.15
NUP88-201ENST00000225696 DPYDQ12882 1025 aa14.15□□□□□ -0.15
NUP88-201ENST00000225696 LCMT1Q9UIC8 334 aa14.15□□□□□ -0.15
NUP88-201ENST00000225696 FBXO3Q9UK99 471 aa14.15□□□□□ -0.15
NUP88-201ENST00000225696 ADAM21Q9UKJ8 722 aa14.15□□□□□ -0.15
NUP88-201ENST00000225696 CCDC175P0C221 793 aa14.14□□□□□ -0.15
NUP88-201ENST00000225696 CHMP4BP1P59074 171 aa14.14□□□□□ -0.15
NUP88-201ENST00000225696 NOM1Q5C9Z4 860 aaKnown RBP14.14□□□□□ -0.15
NUP88-201ENST00000225696 ELOA2Q8IYF1 753 aaPredicted RBP14.14□□□□□ -0.15
NUP88-201ENST00000225696 IGSF22Q8N9C0 903 aa14.14□□□□□ -0.15
NUP88-201ENST00000225696 STAMQ92783 540 aa14.14□□□□□ -0.15
NUP88-201ENST00000225696 SRPRBQ9Y5M8 271 aaKnown RBP14.14□□□□□ -0.15
NUP88-201ENST00000225696 UBR2Q8IWV8 1755 aa14.14□□□□□ -0.15
NUP88-201ENST00000225696 GSG1L2A8MUP6 293 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 MAP2K7O14733 419 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 CDC25AP30304 524 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 CASP14P31944 242 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 PBX1P40424 430 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 FXR1P51114 621 aaKnown RBP eCLIP14.13□□□□□ -0.15
NUP88-201ENST00000225696 MCM6Q14566 821 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 DNAJC10Q8IXB1 793 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 MAGEB6Q8N7X4 407 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 ACRBPQ8NEB7 543 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 CDC5LQ99459 802 aaKnown RBP14.13□□□□□ -0.15
NUP88-201ENST00000225696 PLA2G12BQ9BX93 195 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 PDE11AQ9HCR9 933 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 TOMM22Q9NS69 142 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 ABCC12Q96J65 1359 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 STK36Q9NRP7 1315 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 ERVV-2B6SEH9 535 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 PATL2C9JE40 543 aaKnown RBP14.13□□□□□ -0.15
NUP88-201ENST00000225696 PDE8BO95263 885 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 TRIM28Q13263 835 aaKnown RBP14.13□□□□□ -0.15
NUP88-201ENST00000225696 CUL4BQ13620 913 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 ZNF569Q5MCW4 686 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 BEND6Q5SZJ8 279 aaPredicted RBP14.13□□□□□ -0.15
NUP88-201ENST00000225696 SRGAP1Q7Z6B7 1085 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 CRACR2BQ8N4Y2 399 aaPredicted RBP14.13□□□□□ -0.15
NUP88-201ENST00000225696 ZFP91Q96JP5 570 aaPredicted RBP14.13□□□□□ -0.15
NUP88-201ENST00000225696 PANX2Q96RD6 677 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 NAPBQ9H115 298 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 STRN4Q9NRL3 753 aa14.13□□□□□ -0.15
NUP88-201ENST00000225696 ADD3Q9UEY8 706 aaKnown RBP14.13□□□□□ -0.15
NUP88-201ENST00000225696 PCDH11XQ9BZA7 1347 aa14.12□□□□□ -0.15
NUP88-201ENST00000225696 PCDH11YQ9BZA8 1340 aa14.12□□□□□ -0.15
NUP88-201ENST00000225696 RTN1Q16799 776 aa14.12□□□□□ -0.15
NUP88-201ENST00000225696 RILPL1Q5EBL4 403 aa14.12□□□□□ -0.15
NUP88-201ENST00000225696 AKNAD1Q5T1N1 836 aa14.12□□□□□ -0.15
NUP88-201ENST00000225696 NUP133Q8WUM0 1156 aa14.12□□□□□ -0.15
NUP88-201ENST00000225696 FOXP1Q9H334 677 aaPredicted RBP14.12□□□□□ -0.15
NUP88-201ENST00000225696 HOOK1Q9UJC3 728 aaKnown RBP14.12□□□□□ -0.15
NUP88-201ENST00000225696 ASAP1Q9ULH1 1129 aa14.12□□□□□ -0.15
NUP88-201ENST00000225696 STRCP1A6NGW2 1772 aa14.12□□□□□ -0.15
NUP88-201ENST00000225696 CCDC151A5D8V7 595 aa14.12□□□□□ -0.15
NUP88-201ENST00000225696 PRDM1O75626 825 aa14.12□□□□□ -0.15
NUP88-201ENST00000225696 GYPCP04921 128 aa14.12□□□□□ -0.15
NUP88-201ENST00000225696 LMAN1P49257 510 aa14.12□□□□□ -0.15
NUP88-201ENST00000225696 TTF1Q15361 905 aaPredicted RBP14.12□□□□□ -0.15
NUP88-201ENST00000225696 SAFBQ15424 915 aaKnown RBP eCLIP14.12□□□□□ -0.15
NUP88-201ENST00000225696 ZSCAN26Q16670 478 aa14.12□□□□□ -0.15
NUP88-201ENST00000225696 TOM1L2Q6ZVM7 507 aa14.12□□□□□ -0.15
NUP88-201ENST00000225696 NLRP10Q86W26 655 aa14.12□□□□□ -0.15
NUP88-201ENST00000225696 TXLNBQ8N3L3 684 aa14.12□□□□□ -0.15
NUP88-201ENST00000225696 LCORLQ8N3X6 602 aa14.12□□□□□ -0.15
NUP88-201ENST00000225696 FEZ2Q9UHY8 353 aaPredicted RBP14.12□□□□□ -0.15
NUP88-201ENST00000225696 LRP6O75581 1613 aa14.12□□□□□ -0.15
NUP88-201ENST00000225696 RHOXF2BP0C7M4 288 aa14.11□□□□□ -0.15
NUP88-201ENST00000225696 ATF3P18847 181 aa14.11□□□□□ -0.15
NUP88-201ENST00000225696 ARID4AP29374 1257 aaPredicted RBP14.11□□□□□ -0.15
NUP88-201ENST00000225696 CCT6AP40227 531 aaKnown RBP14.11□□□□□ -0.15
NUP88-201ENST00000225696 CTSWP56202 376 aa14.11□□□□□ -0.15
NUP88-201ENST00000225696 RASGRF1Q13972 1273 aa14.11□□□□□ -0.15
NUP88-201ENST00000225696 CADPS2Q86UW7 1296 aa14.11□□□□□ -0.15
NUP88-201ENST00000225696 SLC35F6Q8N357 371 aa14.11□□□□□ -0.15
NUP88-201ENST00000225696 PAGE5Q96GU1 130 aa14.11□□□□□ -0.15
NUP88-201ENST00000225696 ZNF512BQ96KM6 892 aaPredicted RBP14.11□□□□□ -0.15
NUP88-201ENST00000225696 RHOXF2Q9BQY4 288 aa14.11□□□□□ -0.15
NUP88-201ENST00000225696 ABCB6Q9NP58 842 aa14.11□□□□□ -0.15
NUP88-201ENST00000225696 VPS54Q9P1Q0 977 aa14.11□□□□□ -0.15
NUP88-201ENST00000225696 CDC23Q9UJX2 597 aa14.11□□□□□ -0.15
NUP88-201ENST00000225696 PPP1R3GB7ZBB8 358 aa14.1□□□□□ -0.15
NUP88-201ENST00000225696 TRIM66O15016 1216 aa14.1□□□□□ -0.15
NUP88-201ENST00000225696 MFAP3LO75121 409 aa14.1□□□□□ -0.15
NUP88-201ENST00000225696 ERCC5P28715 1186 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms