RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 HPDP32754 393 aaPredicted RBP12.34□□□□□ -0.43
KNOP1-201ENST00000219837 BEND3Q5T5X7 828 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 GKAP1Q5VSY0 366 aaPredicted RBP12.34□□□□□ -0.43
KNOP1-201ENST00000219837 NSMFQ6X4W1 530 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 STMN2Q93045 179 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 TCP10L2B9ZVM9 353 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 ZBTB24O43167 697 aaPredicted RBP12.34□□□□□ -0.43
KNOP1-201ENST00000219837 PRDM1O75626 825 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 TBC1D8BQ0IIM8 1120 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 DLGAP5Q15398 846 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 CABP7Q86V35 215 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 TPH2Q8IWU9 490 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 USP40Q9NVE5 1235 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 TRPC6Q9Y210 931 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 H7C1D1 291 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 LONRF3Q496Y0 759 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 CSGALNACT2Q8N6G5 542 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 AFG3L2Q9Y4W6 797 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 MYL5Q02045 173 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 LRMPQ12912 555 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 DCUN1D2Q6PH85 259 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 OTUD6AQ7L8S5 288 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 GLT8D2Q9H1C3 349 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 NCOA5Q9HCD5 579 aaKnown RBP12.34□□□□□ -0.43
KNOP1-201ENST00000219837 CSADQ9Y600 493 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 MAST1Q9Y2H9 1570 aa12.33□□□□□ -0.43
KNOP1-201ENST00000219837 PALM3A6NDB9 673 aaPredicted RBP12.33□□□□□ -0.44
KNOP1-201ENST00000219837 GIPC1O14908 333 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 OATP04181 439 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 P4HA1P13674 534 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 PDE6BP35913 854 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 ANO1Q5XXA6 986 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 ZNF365Q70YC5 407 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.33□□□□□ -0.44
KNOP1-201ENST00000219837 NUP160Q12769 1436 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 FAM160A1Q05DH4 1040 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 IFRD2Q12894 506 aaPredicted RBP12.33□□□□□ -0.44
KNOP1-201ENST00000219837 SEPT14Q6ZU15 432 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 SRGAP1Q7Z6B7 1085 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 CERS3Q8IU89 383 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 HACE1Q8IYU2 909 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 RNF169Q8NCN4 708 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 SLC5A4Q9NY91 659 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 VAMP4O75379 141 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 HDXQ7Z353 690 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 NELFBQ8WX92 580 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 MLXIPQ9HAP2 919 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 BCS1LQ9Y276 419 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 ARHGAP27Q6ZUM4 889 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 SH3TC1Q8TE82 1336 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 G2E3Q7L622 706 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 KRT25Q7Z3Z0 450 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 NAPGQ99747 312 aaPredicted RBP12.33□□□□□ -0.44
KNOP1-201ENST00000219837 BLZF1Q9H2G9 400 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 SEPT10Q9P0V9 454 aa12.33□□□□□ -0.44
KNOP1-201ENST00000219837 ZNF532Q9HCE3 1301 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 TESPA1A2RU30 521 aaPredicted RBP12.32□□□□□ -0.44
KNOP1-201ENST00000219837 KRT81Q14533 505 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 NONOQ15233 471 aaKnown RBP eCLIP12.32□□□□□ -0.44
KNOP1-201ENST00000219837 MIER3Q7Z3K6 550 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 CEP57Q86XR8 500 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 DCTPP1Q9H773 170 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 CTTNBP2NLQ9P2B4 639 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 KCNH3Q9ULD8 1083 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 TTC36A6NLP5 189 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 ITKQ08881 620 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 RILPL1Q5EBL4 403 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 NLRX1Q86UT6 975 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 CCDC89Q8N998 374 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 LPIN2Q92539 896 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 TRIM31Q9BZY9 425 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.32□□□□□ -0.44
KNOP1-201ENST00000219837 TUBB4AP04350 444 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 GTF2A1P52655 376 aaPredicted RBP12.32□□□□□ -0.44
KNOP1-201ENST00000219837 ATP11AP98196 1134 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 SESTD1Q86VW0 696 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 PHKBQ93100 1093 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 USP26Q9BXU7 913 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 ZMYM3Q14202 1370 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 BCRP11274 1271 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 TNNI1P19237 187 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 SPC25Q9HBM1 224 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 CETN3O15182 167 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 EXOC3O60645 756 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 A1BGP04217 495 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 PHACTR3Q96KR7 559 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 FAM193BQ96PV7 902 aaPredicted RBP12.32□□□□□ -0.44
KNOP1-201ENST00000219837 LZTS2Q9BRK4 669 aa12.32□□□□□ -0.44
KNOP1-201ENST00000219837 DDX21Q9NR30 783 aaKnown RBP eCLIP12.32□□□□□ -0.44
KNOP1-201ENST00000219837 NR1I2O75469 434 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 ATL3Q6DD88 541 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 NOP9Q86U38 636 aaKnown RBP12.31□□□□□ -0.44
KNOP1-201ENST00000219837 LRWD1Q9UFC0 647 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 TACC3Q9Y6A5 838 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 hCG_1642624A0A1W2PR95 340 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 PPARDQ03181 441 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 ARHGAP44Q17R89 818 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 C8orf74Q6P047 294 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 NCAPG2Q86XI2 1143 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 DEPTORQ8TB45 409 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms