RNA–Protein interactions for RNA: ENST00000214869.6

TMED1-201, Transcript of transmembrane p24 trafficking protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED1, Length 1,340 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-201ENST00000214869 NEDD1Q8NHV4 660 aa18.47■□□□□ 0.55
TMED1-201ENST00000214869 PGAP2Q9UHJ9 254 aa18.47■□□□□ 0.55
TMED1-201ENST00000214869 KLF18A0A0U1RQI7 1052 aa18.46■□□□□ 0.55
TMED1-201ENST00000214869 EGFRP00533 1210 aa18.46■□□□□ 0.55
TMED1-201ENST00000214869 SHMT1P34896 483 aa18.46■□□□□ 0.55
TMED1-201ENST00000214869 NOVP48745 357 aa18.46■□□□□ 0.55
TMED1-201ENST00000214869 TFAP4Q01664 338 aa18.46■□□□□ 0.55
TMED1-201ENST00000214869 WTAPQ15007 396 aa18.46■□□□□ 0.55
TMED1-201ENST00000214869 SAMD7Q7Z3H4 446 aa18.46■□□□□ 0.55
TMED1-201ENST00000214869 ENAHQ8N8S7 591 aaPredicted RBP18.46■□□□□ 0.55
TMED1-201ENST00000214869 L3MBTL3Q96JM7 780 aaPredicted RBP18.46■□□□□ 0.55
TMED1-201ENST00000214869 HPS5Q9UPZ3 1129 aa18.46■□□□□ 0.55
TMED1-201ENST00000214869 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.46■□□□□ 0.55
TMED1-201ENST00000214869 TNKSO95271 1327 aa18.45■□□□□ 0.54
TMED1-201ENST00000214869 SCN4AP35499 1836 aa18.45■□□□□ 0.54
TMED1-201ENST00000214869 TSPY2A6NKD2 308 aa18.45■□□□□ 0.54
TMED1-201ENST00000214869 TCP10L2B9ZVM9 353 aa18.45■□□□□ 0.54
TMED1-201ENST00000214869 TNNI2P48788 182 aa18.45■□□□□ 0.54
TMED1-201ENST00000214869 MAP3K10Q02779 954 aa18.45■□□□□ 0.54
TMED1-201ENST00000214869 TNFAIP1Q13829 316 aa18.45■□□□□ 0.54
TMED1-201ENST00000214869 TBC1D10BQ4KMP7 808 aaPredicted RBP18.45■□□□□ 0.54
TMED1-201ENST00000214869 FAM47AQ5JRC9 791 aa18.45■□□□□ 0.54
TMED1-201ENST00000214869 APOA5Q6Q788 366 aa18.45■□□□□ 0.54
TMED1-201ENST00000214869 DGKHQ86XP1 1220 aa18.45■□□□□ 0.54
TMED1-201ENST00000214869 NECAB1Q8N987 351 aa18.45■□□□□ 0.54
TMED1-201ENST00000214869 CCDC17Q96LX7 622 aa18.45■□□□□ 0.54
TMED1-201ENST00000214869 LLPHQ9BRT6 129 aaKnown RBP18.45■□□□□ 0.54
TMED1-201ENST00000214869 SLKQ9H2G2 1235 aaPredicted RBP18.45■□□□□ 0.54
TMED1-201ENST00000214869 SENP2Q9HC62 589 aa18.45■□□□□ 0.54
TMED1-201ENST00000214869 HERC5Q9UII4 1024 aaKnown RBP18.45■□□□□ 0.54
TMED1-201ENST00000214869 POLR2AP24928 1970 aaKnown RBP18.44■□□□□ 0.54
TMED1-201ENST00000214869 DCAF8L1A6NGE4 600 aa18.44■□□□□ 0.54
TMED1-201ENST00000214869 TBC1D12O60347 775 aa18.44■□□□□ 0.54
TMED1-201ENST00000214869 DDNO94850 711 aaPredicted RBP18.44■□□□□ 0.54
TMED1-201ENST00000214869 RCSD1Q6JBY9 416 aa18.44■□□□□ 0.54
TMED1-201ENST00000214869 TATDN1Q6P1N9 297 aa18.44■□□□□ 0.54
TMED1-201ENST00000214869 CCDC83Q8IWF9 413 aa18.44■□□□□ 0.54
TMED1-201ENST00000214869 SPRYD3Q8NCJ5 442 aa18.44■□□□□ 0.54
TMED1-201ENST00000214869 ZKSCAN3Q9BRR0 538 aa18.44■□□□□ 0.54
TMED1-201ENST00000214869 DNAJC18Q9H819 358 aa18.44■□□□□ 0.54
TMED1-201ENST00000214869 VEZTQ9HBM0 779 aa18.44■□□□□ 0.54
TMED1-201ENST00000214869 IL17RBQ9NRM6 502 aa18.44■□□□□ 0.54
TMED1-201ENST00000214869 IGKV6D-41A0A0C4DH26 115 aa18.43■□□□□ 0.54
TMED1-201ENST00000214869 CCDC69A6NI79 296 aa18.43■□□□□ 0.54
TMED1-201ENST00000214869 GOLGA8BA8MQT2 603 aa18.43■□□□□ 0.54
TMED1-201ENST00000214869 TSPY3P0CV98 308 aa18.43■□□□□ 0.54
TMED1-201ENST00000214869 TSPY8P0CW00 308 aa18.43■□□□□ 0.54
TMED1-201ENST00000214869 EPS15P42566 896 aa18.43■□□□□ 0.54
TMED1-201ENST00000214869 SCRN1Q12765 414 aa18.43■□□□□ 0.54
TMED1-201ENST00000214869 DPY19L2Q6NUT2 758 aa18.43■□□□□ 0.54
TMED1-201ENST00000214869 ZSCAN29Q8IWY8 852 aaPredicted RBP18.43■□□□□ 0.54
TMED1-201ENST00000214869 ADARB2Q9NS39 739 aaKnown RBP18.43■□□□□ 0.54
TMED1-201ENST00000214869 ZBTB43O43298 467 aa18.42■□□□□ 0.54
TMED1-201ENST00000214869 LMOD1P29536 600 aaPredicted RBP18.42■□□□□ 0.54
TMED1-201ENST00000214869 PPP2R5BQ15173 497 aa18.42■□□□□ 0.54
TMED1-201ENST00000214869 IFIT1BQ5T764 474 aaKnown RBP18.42■□□□□ 0.54
TMED1-201ENST00000214869 RBM26Q5T8P6 1007 aaKnown RBP18.42■□□□□ 0.54
TMED1-201ENST00000214869 NFXL1Q6ZNB6 911 aa18.42■□□□□ 0.54
TMED1-201ENST00000214869 APOBEC3FQ8IUX4 373 aaKnown RBP18.42■□□□□ 0.54
TMED1-201ENST00000214869 CRACR2BQ8N4Y2 399 aaPredicted RBP18.42■□□□□ 0.54
TMED1-201ENST00000214869 TRPM4Q8TD43 1214 aa18.42■□□□□ 0.54
TMED1-201ENST00000214869 CSRNP1Q96S65 589 aa18.42■□□□□ 0.54
TMED1-201ENST00000214869 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.42■□□□□ 0.54
TMED1-201ENST00000214869 CHMP5Q9NZZ3 219 aa18.42■□□□□ 0.54
TMED1-201ENST00000214869 SLC12A7Q9Y666 1083 aa18.42■□□□□ 0.54
TMED1-201ENST00000214869 PITPNM2Q9BZ72 1349 aa18.42■□□□□ 0.54
TMED1-201ENST00000214869 WDR90Q96KV7 1748 aa18.41■□□□□ 0.54
TMED1-201ENST00000214869 DHX16O60231 1041 aaKnown RBP18.41■□□□□ 0.54
TMED1-201ENST00000214869 YY1P25490 414 aa18.41■□□□□ 0.54
TMED1-201ENST00000214869 STK3Q13188 491 aa18.41■□□□□ 0.54
TMED1-201ENST00000214869 RASA3Q14644 834 aa18.41■□□□□ 0.54
TMED1-201ENST00000214869 PPP4R3BQ5MIZ7 849 aa18.41■□□□□ 0.54
TMED1-201ENST00000214869 SYNE3Q6ZMZ3 975 aa18.41■□□□□ 0.54
TMED1-201ENST00000214869 ZNF654Q8IZM8 581 aa18.41■□□□□ 0.54
TMED1-201ENST00000214869 SMARCC2Q8TAQ2 1214 aa18.41■□□□□ 0.54
TMED1-201ENST00000214869 TEPSINQ96N21 525 aa18.41■□□□□ 0.54
TMED1-201ENST00000214869 FOXD4L1Q9NU39 408 aa18.41■□□□□ 0.54
TMED1-201ENST00000214869 HACL1Q9UJ83 578 aa18.41■□□□□ 0.54
TMED1-201ENST00000214869 SMC3Q9UQE7 1217 aa18.41■□□□□ 0.54
TMED1-201ENST00000214869 MYH4Q9Y623 1939 aa18.41■□□□□ 0.54
TMED1-201ENST00000214869 GLTPD2A6NH11 291 aa18.4■□□□□ 0.54
TMED1-201ENST00000214869 NMT2O60551 498 aa18.4■□□□□ 0.54
TMED1-201ENST00000214869 DDAH1O94760 285 aa18.4■□□□□ 0.54
TMED1-201ENST00000214869 AKR1B1P15121 316 aa18.4■□□□□ 0.54
TMED1-201ENST00000214869 HIRAP54198 1017 aaPredicted RBP18.4■□□□□ 0.54
TMED1-201ENST00000214869 MAP3K14Q99558 947 aa18.4■□□□□ 0.54
TMED1-201ENST00000214869 TMEM39BQ9GZU3 492 aa18.4■□□□□ 0.54
TMED1-201ENST00000214869 ASTN2O75129 1339 aaPredicted RBP18.39■□□□□ 0.53
TMED1-201ENST00000214869 CTDNEP1O95476 244 aa18.39■□□□□ 0.53
TMED1-201ENST00000214869 CALM1P0DP23 149 aa18.39■□□□□ 0.53
TMED1-201ENST00000214869 CALM2P0DP24 149 aa18.39■□□□□ 0.53
TMED1-201ENST00000214869 CALM3P0DP25 149 aa18.39■□□□□ 0.53
TMED1-201ENST00000214869 METAP2P50579 478 aaKnown RBP eCLIP18.39■□□□□ 0.53
TMED1-201ENST00000214869 TROAPQ12815 778 aa18.39■□□□□ 0.53
TMED1-201ENST00000214869 CATIPQ7Z7H3 387 aa18.39■□□□□ 0.53
TMED1-201ENST00000214869 NSUN7Q8NE18 718 aaKnown RBP18.39■□□□□ 0.53
TMED1-201ENST00000214869 TRIM34Q9BYJ4 488 aa18.39■□□□□ 0.53
TMED1-201ENST00000214869 FAM217BQ9NTX9 383 aaPredicted RBP18.39■□□□□ 0.53
TMED1-201ENST00000214869 PPP2R3BQ9Y5P8 575 aa18.39■□□□□ 0.53
TMED1-201ENST00000214869 PDIA4P13667 645 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms