RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 PSMB7Q99436 277 aa11.34□□□□□ -0.59
CLDN18-201ENST00000183605 HELLSQ9NRZ9 838 aa11.34□□□□□ -0.59
CLDN18-201ENST00000183605 INTS13Q9NVM9 706 aa11.34□□□□□ -0.59
CLDN18-201ENST00000183605 TAB2Q9NYJ8 693 aa11.34□□□□□ -0.59
CLDN18-201ENST00000183605 ZNF330Q9Y3S2 320 aaPredicted RBP11.34□□□□□ -0.59
CLDN18-201ENST00000183605 UBXN1Q04323 297 aa11.34□□□□□ -0.59
CLDN18-201ENST00000183605 RRAGBQ5VZM2 374 aa11.34□□□□□ -0.59
CLDN18-201ENST00000183605 DSCC1Q9BVC3 393 aa11.34□□□□□ -0.59
CLDN18-201ENST00000183605 A0A087WZG4 1122 aa11.34□□□□□ -0.59
CLDN18-201ENST00000183605 MFAP3LO75121 409 aa11.34□□□□□ -0.59
CLDN18-201ENST00000183605 CHRM1P11229 460 aaPredicted RBP11.34□□□□□ -0.59
CLDN18-201ENST00000183605 USP14P54578 494 aa11.34□□□□□ -0.59
CLDN18-201ENST00000183605 MAATS1Q7Z4T9 603 aa11.34□□□□□ -0.59
CLDN18-201ENST00000183605 SMYD4Q8IYR2 804 aaPredicted RBP11.34□□□□□ -0.59
CLDN18-201ENST00000183605 JAKMIP2Q96AA8 810 aa11.34□□□□□ -0.59
CLDN18-201ENST00000183605 BABAM1Q9NWV8 329 aa11.34□□□□□ -0.59
CLDN18-201ENST00000183605 BCCIPQ9P287 314 aaKnown RBP eCLIP11.34□□□□□ -0.59
CLDN18-201ENST00000183605 A0A1B0GUA9 196 aa11.33□□□□□ -0.6
CLDN18-201ENST00000183605 RNF113AO15541 343 aaKnown RBP11.33□□□□□ -0.6
CLDN18-201ENST00000183605 PAFAH1B1P43034 410 aa11.33□□□□□ -0.6
CLDN18-201ENST00000183605 PSEN1P49768 467 aa11.33□□□□□ -0.6
CLDN18-201ENST00000183605 SSRP1Q08945 709 aaKnown RBP11.33□□□□□ -0.6
CLDN18-201ENST00000183605 IFT88Q13099 833 aa11.33□□□□□ -0.6
CLDN18-201ENST00000183605 E2F5Q15329 346 aa11.33□□□□□ -0.6
CLDN18-201ENST00000183605 EHBP1Q8NDI1 1231 aa11.33□□□□□ -0.6
CLDN18-201ENST00000183605 NUP133Q8WUM0 1156 aa11.33□□□□□ -0.6
CLDN18-201ENST00000183605 CD248Q9HCU0 757 aa11.33□□□□□ -0.6
CLDN18-201ENST00000183605 MAGEC2Q9UBF1 373 aaPredicted RBP11.33□□□□□ -0.6
CLDN18-201ENST00000183605 EPN1Q9Y6I3 576 aaPredicted RBP11.33□□□□□ -0.6
CLDN18-201ENST00000183605 CHUKO15111 745 aa11.33□□□□□ -0.6
CLDN18-201ENST00000183605 PPP6R2O75170 966 aa11.33□□□□□ -0.6
CLDN18-201ENST00000183605 PLCD1P51178 756 aa11.33□□□□□ -0.6
CLDN18-201ENST00000183605 SPA17Q15506 151 aa11.33□□□□□ -0.6
CLDN18-201ENST00000183605 CFAP58Q5T655 872 aa11.33□□□□□ -0.6
CLDN18-201ENST00000183605 KAT2BQ92831 832 aa11.33□□□□□ -0.6
CLDN18-201ENST00000183605 MYL10Q9BUA6 226 aa11.33□□□□□ -0.6
CLDN18-201ENST00000183605 VIPAS39Q9H9C1 493 aa11.33□□□□□ -0.6
CLDN18-201ENST00000183605 CTNND2Q9UQB3 1225 aa11.33□□□□□ -0.6
CLDN18-201ENST00000183605 MAPK8IP1Q9UQF2 711 aa11.33□□□□□ -0.6
CLDN18-201ENST00000183605 LUC7L2Q9Y383 392 aaKnown RBP11.33□□□□□ -0.6
CLDN18-201ENST00000183605 CDHR2Q9BYE9 1310 aa11.33□□□□□ -0.6
CLDN18-201ENST00000183605 PRR36Q9H6K5 1346 aa11.33□□□□□ -0.6
CLDN18-201ENST00000183605 ZBTB43O43298 467 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 CDC25AP30304 524 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 HPDP32754 393 aaPredicted RBP11.32□□□□□ -0.6
CLDN18-201ENST00000183605 EXOSC10Q01780 885 aaKnown RBP11.32□□□□□ -0.6
CLDN18-201ENST00000183605 IFT81Q8WYA0 676 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 HAUS7Q99871 368 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 SCP2P22307 547 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 SPATA1Q5VX52 437 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 XAGE3Q8WTP9 111 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 CCDC51Q96ER9 411 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 MMS19Q96T76 1030 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 HSD3B7Q9H2F3 369 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 CEP131Q9UPN4 1083 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 PPLO60437 1756 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 GOLGA8KD6RF30 607 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 RPSAP08865 295 aaKnown RBP11.32□□□□□ -0.6
CLDN18-201ENST00000183605 C2orf54Q08AI8 447 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 TBX2Q13207 712 aaPredicted RBP11.32□□□□□ -0.6
CLDN18-201ENST00000183605 CCDC96Q2M329 555 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 NBPF14Q5TI25 921 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 RESP18Q5W5W9 173 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 LMBR1LQ6UX01 489 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 COPS6Q7L5N1 327 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 FOXP4Q8IVH2 680 aaPredicted RBP11.32□□□□□ -0.6
CLDN18-201ENST00000183605 MYO1AQ9UBC5 1043 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 TRIM10Q9UDY6 481 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 SBNO1A3KN83 1393 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 IGSF1Q8N6C5 1336 aa11.32□□□□□ -0.6
CLDN18-201ENST00000183605 SYF2O95926 243 aaKnown RBP11.31□□□□□ -0.6
CLDN18-201ENST00000183605 HOXB7P09629 217 aa11.31□□□□□ -0.6
CLDN18-201ENST00000183605 MMP14P50281 582 aa11.31□□□□□ -0.6
CLDN18-201ENST00000183605 KRT83P78385 493 aa11.31□□□□□ -0.6
CLDN18-201ENST00000183605 SARNPP82979 210 aaKnown RBP11.31□□□□□ -0.6
CLDN18-201ENST00000183605 SLC12A7Q9Y666 1083 aa11.31□□□□□ -0.6
CLDN18-201ENST00000183605 E7EVH7 732 aa11.31□□□□□ -0.6
CLDN18-201ENST00000183605 EIF3HO15372 352 aaKnown RBP eCLIP11.31□□□□□ -0.6
CLDN18-201ENST00000183605 TRIM21P19474 475 aaKnown RBP11.31□□□□□ -0.6
CLDN18-201ENST00000183605 ELF1P32519 619 aa11.31□□□□□ -0.6
CLDN18-201ENST00000183605 CYLC1P35663 651 aaPredicted RBP11.31□□□□□ -0.6
CLDN18-201ENST00000183605 FXR1P51114 621 aaKnown RBP eCLIP11.31□□□□□ -0.6
CLDN18-201ENST00000183605 KIF5AQ12840 1032 aa11.31□□□□□ -0.6
CLDN18-201ENST00000183605 NR1I3Q14994 352 aa11.31□□□□□ -0.6
CLDN18-201ENST00000183605 TMEM67Q5HYA8 995 aa11.31□□□□□ -0.6
CLDN18-201ENST00000183605 RASGRP2Q7LDG7 609 aa11.31□□□□□ -0.6
CLDN18-201ENST00000183605 PPANQ9NQ55 473 aaKnown RBP11.31□□□□□ -0.6
CLDN18-201ENST00000183605 KCNJ14Q9UNX9 436 aa11.31□□□□□ -0.6
CLDN18-201ENST00000183605 ZNF609O15014 1411 aa11.31□□□□□ -0.6
CLDN18-201ENST00000183605 PRAMEF22A3QJZ6 481 aa11.31□□□□□ -0.6
CLDN18-201ENST00000183605 BTBD18B2RXH4 712 aa11.31□□□□□ -0.6
CLDN18-201ENST00000183605 CPP00450 1065 aa11.31□□□□□ -0.6
CLDN18-201ENST00000183605 VAV2P52735 878 aa11.31□□□□□ -0.6
CLDN18-201ENST00000183605 WASF1Q92558 559 aa11.31□□□□□ -0.6
CLDN18-201ENST00000183605 RPGRIP1Q96KN7 1286 aa11.31□□□□□ -0.6
CLDN18-201ENST00000183605 CCDC85AQ96PX6 553 aaPredicted RBP11.31□□□□□ -0.6
CLDN18-201ENST00000183605 CEP126Q9P2H0 1117 aa11.31□□□□□ -0.6
CLDN18-201ENST00000183605 DLG5Q8TDM6 1919 aa11.31□□□□□ -0.6
CLDN18-201ENST00000183605 ERICH2A1L162 156 aa11.3□□□□□ -0.6
CLDN18-201ENST00000183605 IFIT3O14879 490 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms