RNA–Protein interactions for RNA: ENST00000039989.8

TTC17-201, Transcript of tetratricopeptide repeat domain 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC17, Length 4,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-201ENST00000039989 MRE11P49959 708 aa12.46□□□□□ -0.41
TTC17-201ENST00000039989 CRAMP1Q96RY5 1269 aa12.46□□□□□ -0.41
TTC17-201ENST00000039989 ZSCAN16Q9H4T2 348 aaPredicted RBP12.46□□□□□ -0.41
TTC17-201ENST00000039989 PXDNLA1KZ92 1463 aa12.46□□□□□ -0.41
TTC17-201ENST00000039989 TRIM75PA6NK02 468 aa12.46□□□□□ -0.41
TTC17-201ENST00000039989 CFBP00751 764 aa12.46□□□□□ -0.41
TTC17-201ENST00000039989 TOB2Q14106 344 aaPredicted RBP12.46□□□□□ -0.41
TTC17-201ENST00000039989 GRIK5Q16478 980 aa12.46□□□□□ -0.41
TTC17-201ENST00000039989 CC2D2BQ6DHV5 1058 aa12.46□□□□□ -0.41
TTC17-201ENST00000039989 CDK8P49336 464 aa12.46□□□□□ -0.42
TTC17-201ENST00000039989 UBE2HP62256 183 aa12.46□□□□□ -0.42
TTC17-201ENST00000039989 TMEM132AQ24JP5 1023 aa12.46□□□□□ -0.42
TTC17-201ENST00000039989 NSMFQ6X4W1 530 aa12.46□□□□□ -0.42
TTC17-201ENST00000039989 PODNQ7Z5L7 613 aa12.46□□□□□ -0.42
TTC17-201ENST00000039989 BIN2Q9UBW5 565 aaPredicted RBP12.46□□□□□ -0.42
TTC17-201ENST00000039989 PLSCR1O15162 318 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 SERPINC1P01008 464 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 DPY19L2Q6NUT2 758 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 CTR9Q6PD62 1173 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 TMC4Q7Z404 712 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 USP25Q9UHP3 1055 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 TOPAZ1Q8N9V7 1692 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 NF2P35240 595 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 KRT2P35908 639 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 SAMD7Q7Z3H4 446 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 EPB41L4AQ9HCS5 686 aaPredicted RBP12.45□□□□□ -0.42
TTC17-201ENST00000039989 CEP131Q9UPN4 1083 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 PLEKHA8P1O95397 391 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 PLCD1P51178 756 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 ABCB5Q2M3G0 1257 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 ZSCAN23Q3MJ62 389 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 FBXO33Q7Z6M2 555 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 MTMR6Q9Y217 621 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 DAGLAQ9Y4D2 1042 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 SYKP43405 635 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 UBXN2AP68543 259 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 NR5A1Q13285 461 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 COL9A3Q14050 684 aaPredicted RBP12.45□□□□□ -0.42
TTC17-201ENST00000039989 CCDC183Q5T5S1 534 aa12.45□□□□□ -0.42
TTC17-201ENST00000039989 NUP88Q99567 741 aaPredicted RBP12.45□□□□□ -0.42
TTC17-201ENST00000039989 A0A087WWV3 80 aa12.44□□□□□ -0.42
TTC17-201ENST00000039989 DEXIO95424 95 aa12.44□□□□□ -0.42
TTC17-201ENST00000039989 GH2P01242 217 aa12.44□□□□□ -0.42
TTC17-201ENST00000039989 CCDC12Q8WUD4 166 aaPredicted RBP12.44□□□□□ -0.42
TTC17-201ENST00000039989 CHMP2AO43633 222 aa12.44□□□□□ -0.42
TTC17-201ENST00000039989 PFKFB2O60825 505 aa12.44□□□□□ -0.42
TTC17-201ENST00000039989 RASSF7Q02833 373 aa12.44□□□□□ -0.42
TTC17-201ENST00000039989 SLC10A5Q5PT55 438 aa12.44□□□□□ -0.42
TTC17-201ENST00000039989 ILDR1Q86SU0 546 aaPredicted RBP12.44□□□□□ -0.42
TTC17-201ENST00000039989 USP28Q96RU2 1077 aa12.44□□□□□ -0.42
TTC17-201ENST00000039989 NAT10Q9H0A0 1025 aaKnown RBP12.44□□□□□ -0.42
TTC17-201ENST00000039989 TMEM232C9JQI7 657 aa12.44□□□□□ -0.42
TTC17-201ENST00000039989 NSUN7Q8NE18 718 aaKnown RBP12.44□□□□□ -0.42
TTC17-201ENST00000039989 C6orf50Q9HD87 102 aa12.44□□□□□ -0.42
TTC17-201ENST00000039989 MED23Q9ULK4 1368 aa12.44□□□□□ -0.42
TTC17-201ENST00000039989 TNIP1Q15025 636 aa12.43□□□□□ -0.42
TTC17-201ENST00000039989 SULF1Q8IWU6 871 aa12.43□□□□□ -0.42
TTC17-201ENST00000039989 ARHGEF10LQ9HCE6 1279 aa12.43□□□□□ -0.42
TTC17-201ENST00000039989 PNPLA7Q6ZV29 1317 aa12.43□□□□□ -0.42
TTC17-201ENST00000039989 SPDYE3A6NKU9 549 aa12.43□□□□□ -0.42
TTC17-201ENST00000039989 PSMD14O00487 310 aa12.43□□□□□ -0.42
TTC17-201ENST00000039989 PAGR1Q9BTK6 254 aa12.43□□□□□ -0.42
TTC17-201ENST00000039989 PCDHAC2Q9Y5I4 1007 aa12.43□□□□□ -0.42
TTC17-201ENST00000039989 DDX39AO00148 427 aaKnown RBP12.43□□□□□ -0.42
TTC17-201ENST00000039989 NFIAQ12857 509 aa12.43□□□□□ -0.42
TTC17-201ENST00000039989 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.43□□□□□ -0.42
TTC17-201ENST00000039989 COA7Q96BR5 231 aa12.43□□□□□ -0.42
TTC17-201ENST00000039989 TCP11L1Q9NUJ3 509 aa12.43□□□□□ -0.42
TTC17-201ENST00000039989 MROH7-TTC4A0A0A0MT08 1334 aa12.43□□□□□ -0.42
TTC17-201ENST00000039989 FGFR2P21802 821 aa12.43□□□□□ -0.42
TTC17-201ENST00000039989 RAD51AP2Q09MP3 1159 aa12.43□□□□□ -0.42
TTC17-201ENST00000039989 KLHL40Q2TBA0 621 aa12.43□□□□□ -0.42
TTC17-201ENST00000039989 SLFN13Q68D06 897 aa12.43□□□□□ -0.42
TTC17-201ENST00000039989 ZNF274Q96GC6 653 aaPredicted RBP12.43□□□□□ -0.42
TTC17-201ENST00000039989 SALL3Q9BXA9 1300 aa12.43□□□□□ -0.42
TTC17-201ENST00000039989 SH2B2O14492 632 aaPredicted RBP12.42□□□□□ -0.42
TTC17-201ENST00000039989 BRD1O95696 1058 aa12.42□□□□□ -0.42
TTC17-201ENST00000039989 TXKP42681 527 aa12.42□□□□□ -0.42
TTC17-201ENST00000039989 SEPT2Q15019 361 aa12.42□□□□□ -0.42
TTC17-201ENST00000039989 CCDC148Q8NFR7 591 aa12.42□□□□□ -0.42
TTC17-201ENST00000039989 UBE2Q2LH0YL09 131 aa12.42□□□□□ -0.42
TTC17-201ENST00000039989 ERCC3P19447 782 aa12.42□□□□□ -0.42
TTC17-201ENST00000039989 EVX2Q03828 476 aa12.42□□□□□ -0.42
TTC17-201ENST00000039989 ANKRD20A12PQ8NF67 263 aa12.42□□□□□ -0.42
TTC17-201ENST00000039989 MAPK8IP1Q9UQF2 711 aa12.42□□□□□ -0.42
TTC17-201ENST00000039989 MRPS27Q92552 414 aaKnown RBP12.42□□□□□ -0.42
TTC17-201ENST00000039989 CLIC6Q96NY7 704 aa12.42□□□□□ -0.42
TTC17-201ENST00000039989 DNAJC25Q9H1X3 360 aa12.42□□□□□ -0.42
TTC17-201ENST00000039989 CCNT1O60563 726 aaKnown RBP12.41□□□□□ -0.42
TTC17-201ENST00000039989 CDC25AP30304 524 aa12.41□□□□□ -0.42
TTC17-201ENST00000039989 CCDC178Q5BJE1 867 aa12.41□□□□□ -0.42
TTC17-201ENST00000039989 ENAHQ8N8S7 591 aaPredicted RBP12.41□□□□□ -0.42
TTC17-201ENST00000039989 SLIT2O94813 1529 aa12.41□□□□□ -0.42
TTC17-201ENST00000039989 SMCO2A6NFE2 343 aa12.41□□□□□ -0.42
TTC17-201ENST00000039989 INF2Q27J81 1249 aa12.41□□□□□ -0.42
TTC17-201ENST00000039989 TDRD7Q8NHU6 1098 aaKnown RBP12.41□□□□□ -0.42
TTC17-201ENST00000039989 CEP95Q96GE4 821 aa12.41□□□□□ -0.42
TTC17-201ENST00000039989 RBM28Q9NW13 759 aaKnown RBP12.41□□□□□ -0.42
TTC17-201ENST00000039989 STRCP1A6NGW2 1772 aa12.41□□□□□ -0.42
TTC17-201ENST00000039989 MYCLP12524 364 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms