RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Terb1Q8C0V1 768 aa12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Rtn1Q8K0T0 780 aa12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Slc14a2Q8R4T9 930 aa12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 NsmfQ99NF2 532 aa12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Zcrb1Q9CZ96 217 aaKnown RBP12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 SufuQ9Z0P7 484 aa12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Zfyve9A2A8R0 1397 aa12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Map3k15A2AQW0 1331 aa12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Tcof1O08784 1320 aaKnown RBP12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 CoblQ5NBX1 1337 aaKnown RBP12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Prss40A6H6T1 365 aa12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Atp2b1G5E829 1220 aa12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Ckap2Q3V1H1 664 aa12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Klra5Q60652 266 aa12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Mns1Q61884 491 aa12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Glis3Q6XP49 780 aa12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Slitrk3Q810B9 980 aa12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 C1qtnf12Q8R2Z0 308 aa12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Acot9Q9R0X4 439 aaKnown RBP12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 4930523C07RikE9Q2T4 99 aa11.99□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Tlr8P58682 1032 aa11.99□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Epha2Q03145 977 aa11.99□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Klra9Q2TJJ8 266 aa11.99□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Cdcp1Q5U462 833 aa11.99□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Kcnj14Q8JZN3 434 aa11.99□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Slc5a4aQ9ET37 656 aa11.99□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Klra10Q9R1G6 266 aa11.99□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Ktn1Q61595 1327 aaKnown RBP11.99□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Rnaseh1O70338 285 aa11.99□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Slurp2P0DP59 97 aa11.99□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Ell2Q3UKU1 639 aa11.99□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Jakmip3Q5DTN8 844 aa11.99□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Ehmt1Q5DW34 1296 aa11.99□□□□□ -0.49
Ptpre-208ENSMUST00000211788 LarsQ8BMJ2 1178 aa11.99□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Rbm5Q91YE7 815 aaKnown RBP11.99□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Bap1Q99PU7 728 aa11.99□□□□□ -0.49
Ptpre-208ENSMUST00000211788 SarnpQ9D1J3 210 aaKnown RBP11.99□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Mei1Q9D4I2 1268 aa11.99□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Clstn1Q9EPL2 979 aa11.99□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Gm43638A0A0J9YU36 694 aa11.98□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Gm5592Q3V0A6 857 aa11.98□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Znf653Q6YND2 615 aa11.98□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Vps37dQ810I0 261 aa11.98□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Tsen34Q8BMZ5 316 aa11.98□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Efcab8Q8C9R9 203 aa11.98□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Golph3lQ8R088 285 aaKnown RBP11.98□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Mrps25Q9D125 171 aaKnown RBP11.98□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Ccdc39Q9D5Y1 937 aa11.98□□□□□ -0.49
Ptpre-208ENSMUST00000211788 TbcaP48428 108 aaKnown RBP11.98□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Pfkfb1P70266 471 aa11.98□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Nyap1Q6PFX7 833 aa11.98□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Pnpla2Q8BJ56 486 aa11.98□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Zfp202Q8C879 641 aa11.98□□□□□ -0.49
Ptpre-208ENSMUST00000211788 MlphQ91V27 590 aa11.98□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Coro7Q9D2V7 922 aa11.98□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Pik3ap1Q9EQ32 811 aa11.98□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Rcan1Q9JHG6 198 aa11.98□□□□□ -0.49
Ptpre-208ENSMUST00000211788 DonsonQ9QXP4 560 aa11.98□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Mtx1P47802 317 aa11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 TfrcQ62351 763 aaKnown RBP11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Evc2Q8K1G2 1220 aa11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Amhr2Q8K592 568 aa11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Wasf1Q8R5H6 559 aa11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Nop2Q922K7 793 aaKnown RBP11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Nrbp1Q99J45 535 aa11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 AdnpQ9Z103 1108 aaKnown RBP11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 EvplQ9D952 2035 aa11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 AfdnQ9QZQ1 1820 aaKnown RBP11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 NesQ6P5H2 1864 aaKnown RBP11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Bin1O08539 588 aaKnown RBP11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Sec23aQ01405 765 aa11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 A1cfQ5YD48 595 aa11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Kcna4Q61423 654 aa11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Pwp2Q8BU03 919 aaKnown RBP11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Rec8Q8C5S7 591 aa11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Ints4Q8CIM8 964 aa11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Cep89Q9CZX2 791 aa11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 RarsQ9D0I9 660 aaKnown RBP11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 PdiltQ9DAN1 588 aa11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Stk39Q9Z1W9 556 aa11.97□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Aox3G3X982 1335 aa11.96□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Sh3tc1G3X9F6 1346 aa11.96□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Nap1l1P28656 391 aaKnown RBP11.96□□□□□ -0.49
Ptpre-208ENSMUST00000211788 FntaQ61239 377 aa11.96□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Ano6Q6P9J9 911 aa11.96□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Pcdhb14Q6PB90 796 aa11.96□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Dhx40Q6PE54 779 aaKnown RBP11.96□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Fchsd1Q6PFY1 688 aa11.96□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Larp6Q8BN59 492 aa11.96□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Wdr60Q8C761 999 aa11.96□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Tlcd1Q99JT6 247 aa11.96□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Cnpy2Q9QXT0 182 aa11.96□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Cntnap1O54991 1385 aa11.96□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Tbc1d8bA3KGB4 1114 aa11.95□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Prr16A3KMN5 304 aa11.95□□□□□ -0.5
Ptpre-208ENSMUST00000211788 GclcP97494 637 aa11.95□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Sh3gl3Q62421 347 aa11.95□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Fhod1Q6P9Q4 1197 aa11.95□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Tbc1d5Q80XQ2 815 aa11.95□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Ehd2Q8BH64 543 aa11.95□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms