RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Glg1Q61543 1175 aaKnown RBP10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Lrrc8cQ8R502 803 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Terf2ipQ91VL8 393 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Abtb1Q99LJ2 478 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Trim60Q8VI40 466 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Cst12Q9DAN8 128 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Parp1P11103 1013 aaKnown RBP10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ppp1r12bQ8BG95 976 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Tor4aQ8BH02 426 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Polr2dQ9D7M8 142 aaKnown RBP10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Zmym3Q9JLM4 1370 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Zscan25B2RX31 543 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Gm17615E9Q9P2 165 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Eme2Q56A04 373 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Flot2Q60634 428 aaKnown RBP10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Serpinb6Q60854 378 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Spats2lQ91WJ7 558 aaKnown RBP10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ska2Q9CR46 120 aa10.27□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Abt1Q9QYL7 269 aaKnown RBP10.27□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Acnat2Q8BGG9 420 aa10.27□□□□□ -0.76
Col6a5-201ENSMUST00000165165 MycbpapQ5SUV2 932 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Eps15l1Q60902 907 aaKnown RBP10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Fbxo41Q6NS60 873 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Klhl31Q8BWA5 634 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Krt25Q8VCW2 446 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Paip2bQ91W45 136 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Cdc26Q99JP4 85 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Tpcn1Q9EQJ0 817 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 ChmQ9QXG2 665 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ptgs1P22437 602 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Mtx1P47802 317 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 MaeaQ4VC33 396 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Map3k7Q62073 579 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Gstt4Q9D4P7 240 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Gm28961A0A087WPA5 222 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Gm21858A0A087WQ24 222 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Cep85lA0A1W2P884 806 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Tbc1d2B1AVH7 922 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Arhgef9Q3UTH8 516 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 ArhgdiaQ99PT1 204 aaKnown RBP10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Mroh9G5E8L9 891 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Gnat2P50149 354 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ckap2lQ7TS74 745 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Sytl1Q99N80 567 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Mrpl12Q9DB15 201 aaKnown RBP10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ap1b1O35643 943 aaKnown RBP10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Pak1O88643 545 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Slc3a2P10852 526 aaKnown RBP10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Stx2Q00262 289 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Jph4Q80WT0 628 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Trim32Q8CH72 655 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Strn3Q9ERG2 796 aa10.27□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Zscan18E9PUD6 809 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ccdc82Q6PG04 518 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Cracr2bQ80ZJ8 394 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 AdpgkQ8VDL4 496 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Art2bO35975 289 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Sp4Q62445 782 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Rint1Q8BZ36 792 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Fgd4Q91ZT5 766 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Mettl14Q3UIK4 456 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Mrps27Q8BK72 415 aaKnown RBP10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Speer4eK7N6S8 255 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ccdc125Q5U465 500 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Afap1Q80YS6 731 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Hexim1Q8R409 356 aaKnown RBP10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Eid1Q9DCR4 169 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Rlbp1Q9Z275 317 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Gdap1O88741 358 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Krt14Q61781 484 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Snx19Q6P4T1 997 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Slc25a24Q8BMD8 475 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 AmotQ8VHG2 1126 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Tnpo2Q99LG2 887 aaKnown RBP10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Zyg11aA2BFL2 627 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Tsta3P23591 321 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Pik3caP42337 1068 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Esyt1Q3U7R1 1092 aaKnown RBP10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Arhgap44Q5SSM3 814 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 P3h4Q8K2B0 443 aa10.26□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Tnip3A0A1D5RMN0 279 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Gbp10Q000W5 611 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Pde4cQ3UEI1 686 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Acbd5Q5XG73 508 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Krt12Q64291 487 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Catsper1Q91ZR5 686 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ccnt1Q9QWV9 724 aaKnown RBP10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ccdc141E9Q8Q6 1531 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Adcy8P97490 1249 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Aplp1Q03157 653 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Kcnk9Q3LS21 402 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Srrm1Q52KI8 946 aaKnown RBP10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Tekt3Q6X6Z7 490 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Rassf6Q80UQ2 353 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Fbxo9Q8BK06 437 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Dzip1Q8BMD2 852 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Tceanc2Q8R2M0 207 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Satb2Q8VI24 733 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Zcchc8Q9CYA6 709 aaKnown RBP10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Cyth1Q9QX11 398 aa10.25□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 126.7 ms