RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 NR5A1Q13285 461 aa15.89■□□□□ 0.13
PHGDH-233ENST00000642021 RRP12Q5JTH9 1297 aaKnown RBP15.89■□□□□ 0.13
PHGDH-233ENST00000642021 PLCD3Q8N3E9 789 aa15.89■□□□□ 0.13
PHGDH-233ENST00000642021 MED15Q96RN5 788 aa15.89■□□□□ 0.13
PHGDH-233ENST00000642021 MAN1B1Q9UKM7 699 aa15.89■□□□□ 0.13
PHGDH-233ENST00000642021 MMP1P03956 469 aa15.88■□□□□ 0.13
PHGDH-233ENST00000642021 IFNAR1P17181 557 aa15.88■□□□□ 0.13
PHGDH-233ENST00000642021 POLR2DO15514 142 aaKnown RBP15.88■□□□□ 0.13
PHGDH-233ENST00000642021 PDE8AO60658 829 aa15.88■□□□□ 0.13
PHGDH-233ENST00000642021 GABPB1Q06547 395 aaPredicted RBP15.88■□□□□ 0.13
PHGDH-233ENST00000642021 AKNAD1Q5T1N1 836 aa15.88■□□□□ 0.13
PHGDH-233ENST00000642021 USP49Q70CQ1 688 aa15.88■□□□□ 0.13
PHGDH-233ENST00000642021 LPIN2Q92539 896 aa15.88■□□□□ 0.13
PHGDH-233ENST00000642021 SEC31BQ9NQW1 1179 aa15.88■□□□□ 0.13
PHGDH-233ENST00000642021 SERTAD1Q9UHV2 236 aa15.88■□□□□ 0.13
PHGDH-233ENST00000642021 FBXO2Q9UK22 296 aaPredicted RBP15.88■□□□□ 0.13
PHGDH-233ENST00000642021 PCDHB6Q9Y5E3 794 aa15.88■□□□□ 0.13
PHGDH-233ENST00000642021 SHANK3Q9BYB0 1731 aa15.88■□□□□ 0.13
PHGDH-233ENST00000642021 UQCRFS1P1P0C7P4 283 aa15.87■□□□□ 0.13
PHGDH-233ENST00000642021 CYP19A1P11511 503 aaPredicted RBP15.87■□□□□ 0.13
PHGDH-233ENST00000642021 CLCN6P51797 869 aa15.87■□□□□ 0.13
PHGDH-233ENST00000642021 PUM3Q15397 648 aaKnown RBP15.87■□□□□ 0.13
PHGDH-233ENST00000642021 ARHGAP29Q52LW3 1261 aa15.87■□□□□ 0.13
PHGDH-233ENST00000642021 SAMD1Q6SPF0 538 aaPredicted RBP15.87■□□□□ 0.13
PHGDH-233ENST00000642021 ZNF771Q7L3S4 317 aaPredicted RBP15.87■□□□□ 0.13
PHGDH-233ENST00000642021 TRMT44Q8IYL2 757 aaKnown RBP15.87■□□□□ 0.13
PHGDH-233ENST00000642021 FAM177A1Q8N128 213 aaPredicted RBP15.87■□□□□ 0.13
PHGDH-233ENST00000642021 OXER1Q8TDS5 423 aa15.87■□□□□ 0.13
PHGDH-233ENST00000642021 TOGARAM1Q9Y4F4 1720 aa15.87■□□□□ 0.13
PHGDH-233ENST00000642021 VWA3AA6NCI4 1184 aa15.87■□□□□ 0.13
PHGDH-233ENST00000642021 ATP2B1P20020 1258 aa15.87■□□□□ 0.13
PHGDH-233ENST00000642021 PTPREP23469 700 aa15.87■□□□□ 0.13
PHGDH-233ENST00000642021 DHX8Q14562 1220 aaKnown RBP15.87■□□□□ 0.13
PHGDH-233ENST00000642021 TERF2Q15554 542 aa15.87■□□□□ 0.13
PHGDH-233ENST00000642021 PDILTQ8N807 584 aa15.87■□□□□ 0.13
PHGDH-233ENST00000642021 STK36Q9NRP7 1315 aa15.87■□□□□ 0.13
PHGDH-233ENST00000642021 TBX2Q13207 712 aaPredicted RBP15.87■□□□□ 0.13
PHGDH-233ENST00000642021 POSTNQ15063 836 aa15.87■□□□□ 0.13
PHGDH-233ENST00000642021 LCORLQ8N3X6 602 aa15.87■□□□□ 0.13
PHGDH-233ENST00000642021 TOMM22Q9NS69 142 aa15.87■□□□□ 0.13
PHGDH-233ENST00000642021 NFE2L3Q9Y4A8 694 aa15.87■□□□□ 0.13
PHGDH-233ENST00000642021 PHLPP2Q6ZVD8 1323 aa15.86■□□□□ 0.13
PHGDH-233ENST00000642021 SMIM22K7EJ46 135 aa15.86■□□□□ 0.13
PHGDH-233ENST00000642021 URI1O94763 535 aaPredicted RBP15.86■□□□□ 0.13
PHGDH-233ENST00000642021 SARSP49591 514 aaKnown RBP15.86■□□□□ 0.13
PHGDH-233ENST00000642021 ADKP55263 362 aaKnown RBP15.86■□□□□ 0.13
PHGDH-233ENST00000642021 MFSD6Q6ZSS7 791 aa15.86■□□□□ 0.13
PHGDH-233ENST00000642021 TUBB4AP04350 444 aa15.86■□□□□ 0.13
PHGDH-233ENST00000642021 ZNF18P17022 549 aa15.86■□□□□ 0.13
PHGDH-233ENST00000642021 SHISA4Q96DD7 197 aa15.86■□□□□ 0.13
PHGDH-233ENST00000642021 EPC1Q9H2F5 836 aa15.86■□□□□ 0.13
PHGDH-233ENST00000642021 PPP2R2CQ9Y2T4 447 aa15.86■□□□□ 0.13
PHGDH-233ENST00000642021 FHOD1Q9Y613 1164 aa15.86■□□□□ 0.13
PHGDH-233ENST00000642021 PARP3Q9Y6F1 533 aa15.86■□□□□ 0.13
PHGDH-233ENST00000642021 MAP3K12Q12852 859 aa15.85■□□□□ 0.13
PHGDH-233ENST00000642021 TC2NQ8N9U0 490 aa15.85■□□□□ 0.13
PHGDH-233ENST00000642021 SAMSN1Q9NSI8 373 aaKnown RBP15.85■□□□□ 0.13
PHGDH-233ENST00000642021 SOS2Q07890 1332 aaPredicted RBP15.85■□□□□ 0.13
PHGDH-233ENST00000642021 RTN1Q16799 776 aa15.85■□□□□ 0.13
PHGDH-233ENST00000642021 NT5DC1Q5TFE4 455 aa15.85■□□□□ 0.13
PHGDH-233ENST00000642021 CRACR2BQ8N4Y2 399 aaPredicted RBP15.85■□□□□ 0.13
PHGDH-233ENST00000642021 MIGA1Q8NAN2 632 aa15.85■□□□□ 0.13
PHGDH-233ENST00000642021 WDR24Q96S15 920 aa15.85■□□□□ 0.13
PHGDH-233ENST00000642021 CARD6Q9BX69 1037 aa15.85■□□□□ 0.13
PHGDH-233ENST00000642021 BCAMP50895 628 aa15.84■□□□□ 0.13
PHGDH-233ENST00000642021 MORC3Q14149 939 aa15.84■□□□□ 0.13
PHGDH-233ENST00000642021 WTAPQ15007 396 aa15.84■□□□□ 0.13
PHGDH-233ENST00000642021 SAFBQ15424 915 aaKnown RBP eCLIP15.84■□□□□ 0.13
PHGDH-233ENST00000642021 TOGARAM2Q6ZUX3 1019 aa15.84■□□□□ 0.13
PHGDH-233ENST00000642021 BAG1Q99933 345 aaPredicted RBP15.84■□□□□ 0.13
PHGDH-233ENST00000642021 SLC4A4Q9Y6R1 1079 aa15.84■□□□□ 0.13
PHGDH-233ENST00000642021 FAM205CA6NFA0 338 aa15.84■□□□□ 0.13
PHGDH-233ENST00000642021 ARHGAP6O43182 974 aa15.84■□□□□ 0.13
PHGDH-233ENST00000642021 CCP110O43303 1012 aa15.84■□□□□ 0.13
PHGDH-233ENST00000642021 TDO2P48775 406 aa15.84■□□□□ 0.13
PHGDH-233ENST00000642021 HSPA2P54652 639 aa15.84■□□□□ 0.13
PHGDH-233ENST00000642021 ELOA2Q8IYF1 753 aaPredicted RBP15.84■□□□□ 0.13
PHGDH-233ENST00000642021 NUP133Q8WUM0 1156 aa15.84■□□□□ 0.13
PHGDH-233ENST00000642021 KRT23Q9C075 422 aa15.84■□□□□ 0.13
PHGDH-233ENST00000642021 FOXP1Q9H334 677 aaPredicted RBP15.84■□□□□ 0.13
PHGDH-233ENST00000642021 CABP5Q9NP86 173 aa15.84■□□□□ 0.13
PHGDH-233ENST00000642021 ECM29Q5VYK3 1845 aa15.83■□□□□ 0.13
PHGDH-233ENST00000642021 LRP6O75581 1613 aa15.83■□□□□ 0.13
PHGDH-233ENST00000642021 CDK11BP21127 795 aaKnown RBP15.83■□□□□ 0.13
PHGDH-233ENST00000642021 RILPL1Q5EBL4 403 aa15.83■□□□□ 0.13
PHGDH-233ENST00000642021 DZIP3Q86Y13 1208 aaKnown RBP15.83■□□□□ 0.13
PHGDH-233ENST00000642021 STAG1Q8WVM7 1258 aa15.83■□□□□ 0.13
PHGDH-233ENST00000642021 WASF1Q92558 559 aa15.83■□□□□ 0.13
PHGDH-233ENST00000642021 UBXN4Q92575 508 aa15.83■□□□□ 0.13
PHGDH-233ENST00000642021 CSRNP2Q9H175 543 aa15.83■□□□□ 0.13
PHGDH-233ENST00000642021 CNNM2Q9H8M5 875 aa15.83■□□□□ 0.13
PHGDH-233ENST00000642021 MROH5Q6ZUA9 1318 aa15.83■□□□□ 0.13
PHGDH-233ENST00000642021 ACTN4O43707 911 aaKnown RBP15.83■□□□□ 0.12
PHGDH-233ENST00000642021 TADA3O75528 432 aa15.83■□□□□ 0.12
PHGDH-233ENST00000642021 TRIM22Q8IYM9 498 aa15.83■□□□□ 0.12
PHGDH-233ENST00000642021 ENOX1Q8TC92 643 aaKnown RBP15.83■□□□□ 0.12
PHGDH-233ENST00000642021 MYO1BO43795 1136 aa15.82■□□□□ 0.12
PHGDH-233ENST00000642021 EARS2Q5JPH6 523 aaKnown RBP15.82■□□□□ 0.12
PHGDH-233ENST00000642021 SPECC1LQ69YQ0 1117 aa15.82■□□□□ 0.12
PHGDH-233ENST00000642021 ZNF34Q8IZ26 560 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms