RNA–Protein interactions for RNA: ENST00000641458.1

RGPD1-206, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 BASIC

Gene RGPD1, Length 5,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-206ENST00000641458 NYAP2Q9P242 653 aa7.34□□□□□ -1.23
RGPD1-206ENST00000641458 USP17L8P0C7I0 530 aa7.34□□□□□ -1.23
RGPD1-206ENST00000641458 RASA1P20936 1047 aa7.34□□□□□ -1.23
RGPD1-206ENST00000641458 TTC6Q86TZ1 520 aa7.34□□□□□ -1.23
RGPD1-206ENST00000641458 SAMD3Q8N6K7 520 aa7.34□□□□□ -1.23
RGPD1-206ENST00000641458 GTF3C6Q969F1 213 aa7.34□□□□□ -1.23
RGPD1-206ENST00000641458 HOOK2Q96ED9 719 aa7.34□□□□□ -1.23
RGPD1-206ENST00000641458 POTECB2RU33 542 aa7.34□□□□□ -1.24
RGPD1-206ENST00000641458 TROAPQ12815 778 aa7.34□□□□□ -1.24
RGPD1-206ENST00000641458 GMCL1P1Q8NEA9 526 aa7.34□□□□□ -1.24
RGPD1-206ENST00000641458 DNAJC18Q9H819 358 aa7.34□□□□□ -1.24
RGPD1-206ENST00000641458 DDX4Q9NQI0 724 aaKnown RBP7.34□□□□□ -1.24
RGPD1-206ENST00000641458 HDAC9Q9UKV0 1011 aa7.34□□□□□ -1.24
RGPD1-206ENST00000641458 NDUFB9Q9Y6M9 179 aa7.34□□□□□ -1.24
RGPD1-206ENST00000641458 COL11A1P12107 1806 aaPredicted RBP7.34□□□□□ -1.24
RGPD1-206ENST00000641458 IDH1O75874 414 aaKnown RBP7.33□□□□□ -1.24
RGPD1-206ENST00000641458 CD2BP2O95400 341 aaKnown RBP7.33□□□□□ -1.24
RGPD1-206ENST00000641458 SHMT1P34896 483 aa7.33□□□□□ -1.24
RGPD1-206ENST00000641458 DZIP1Q86YF9 867 aaKnown RBP7.33□□□□□ -1.24
RGPD1-206ENST00000641458 SLC4A4Q9Y6R1 1079 aa7.33□□□□□ -1.24
RGPD1-206ENST00000641458 CALM1P0DP23 149 aa7.33□□□□□ -1.24
RGPD1-206ENST00000641458 CALM2P0DP24 149 aa7.33□□□□□ -1.24
RGPD1-206ENST00000641458 CALM3P0DP25 149 aa7.33□□□□□ -1.24
RGPD1-206ENST00000641458 ARMT1Q9H993 441 aa7.33□□□□□ -1.24
RGPD1-206ENST00000641458 ANGEL1Q9UNK9 670 aaKnown RBP7.33□□□□□ -1.24
RGPD1-206ENST00000641458 hCG_1984214I3L0E3 225 aa7.33□□□□□ -1.24
RGPD1-206ENST00000641458 MSH5O43196 834 aa7.33□□□□□ -1.24
RGPD1-206ENST00000641458 BLOC1S2Q6QNY1 142 aa7.33□□□□□ -1.24
RGPD1-206ENST00000641458 CCDC129Q6ZRS4 1044 aa7.33□□□□□ -1.24
RGPD1-206ENST00000641458 NBPF11Q86T75 865 aa7.33□□□□□ -1.24
RGPD1-206ENST00000641458 APOBEC3FQ8IUX4 373 aaKnown RBP7.33□□□□□ -1.24
RGPD1-206ENST00000641458 ZNF713Q8N859 430 aaPredicted RBP7.33□□□□□ -1.24
RGPD1-206ENST00000641458 PI4KBQ9UBF8 816 aa7.33□□□□□ -1.24
RGPD1-206ENST00000641458 TTF2Q9UNY4 1162 aaKnown RBP7.33□□□□□ -1.24
RGPD1-206ENST00000641458 NEDD4P46934 1319 aa7.33□□□□□ -1.24
RGPD1-206ENST00000641458 TMEM87AQ8NBN3 555 aa7.33□□□□□ -1.24
RGPD1-206ENST00000641458 WDR18Q9BV38 432 aa7.33□□□□□ -1.24
RGPD1-206ENST00000641458 MYOZ2Q9NPC6 264 aa7.33□□□□□ -1.24
RGPD1-206ENST00000641458 ZNF70Q9UC06 446 aaPredicted RBP7.33□□□□□ -1.24
RGPD1-206ENST00000641458 ZNF541Q9H0D2 1346 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 BECN1Q14457 450 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 LZTS2Q9BRK4 669 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 TCHHQ07283 1943 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 GLTPD2A6NH11 291 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 WNT10BO00744 389 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 IFNAR1P17181 557 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 DYNLL1P63167 89 aaKnown RBP7.32□□□□□ -1.24
RGPD1-206ENST00000641458 SH3D19Q5HYK7 790 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 LARGE2Q8N3Y3 721 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 ESR2Q92731 530 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 GMCL1Q96IK5 515 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 NAPBQ9H115 298 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 RAI14Q9P0K7 980 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 RBM27Q9P2N5 1060 aaKnown RBP7.32□□□□□ -1.24
RGPD1-206ENST00000641458 MYPNQ86TC9 1320 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 AK2P54819 239 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 ATL3Q6DD88 541 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 NOL10Q9BSC4 688 aaKnown RBP7.32□□□□□ -1.24
RGPD1-206ENST00000641458 ADARB2Q9NS39 739 aaKnown RBP7.32□□□□□ -1.24
RGPD1-206ENST00000641458 ZSWIM5Q9P217 1185 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 WDR81Q562E7 1941 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 PALM3A6NDB9 673 aaPredicted RBP7.32□□□□□ -1.24
RGPD1-206ENST00000641458 SLC3A2P08195 630 aaKnown RBP7.32□□□□□ -1.24
RGPD1-206ENST00000641458 CFAP100Q494V2 611 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 KCNQ5Q9NR82 932 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 IL17RBQ9NRM6 502 aa7.32□□□□□ -1.24
RGPD1-206ENST00000641458 NPHP1O15259 732 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 GUCY1A2P33402 732 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 TNFAIP1Q13829 316 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 LBX2Q6XYB7 198 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 CYB5R4Q7L1T6 521 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 NKX2-3Q8TAU0 364 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 TMX3Q96JJ7 454 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 SPZ1Q9BXG8 430 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 ZNF277Q9NRM2 450 aaPredicted RBP7.31□□□□□ -1.24
RGPD1-206ENST00000641458 ESYT2A0FGR8 921 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 PRKAB2O43741 272 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 PDIA3P30101 505 aaKnown RBP7.31□□□□□ -1.24
RGPD1-206ENST00000641458 FKBP1BP68106 108 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 SIAH1Q8IUQ4 282 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 PRMT6Q96LA8 375 aaPredicted RBP7.31□□□□□ -1.24
RGPD1-206ENST00000641458 SH3GLB2Q9NR46 395 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 ADAMTS5Q9UNA0 930 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 PDE4BQ07343 736 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 SLFNL1Q499Z3 407 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 DAGLBQ8NCG7 672 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 JDP2Q8WYK2 163 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 DBNDD1Q9H9R9 158 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 BRD1O95696 1058 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 COL9A3Q14050 684 aaPredicted RBP7.31□□□□□ -1.24
RGPD1-206ENST00000641458 RIOX1Q9H6W3 641 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 RBM28Q9NW13 759 aaKnown RBP7.31□□□□□ -1.24
RGPD1-206ENST00000641458 SERPINB13Q9UIV8 391 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 TPCN1Q9ULQ1 816 aa7.31□□□□□ -1.24
RGPD1-206ENST00000641458 PSDA5PKW4 1024 aaPredicted RBP7.3□□□□□ -1.24
RGPD1-206ENST00000641458 M0R2N6 131 aa7.3□□□□□ -1.24
RGPD1-206ENST00000641458 CTDNEP1O95476 244 aa7.3□□□□□ -1.24
RGPD1-206ENST00000641458 EIF6P56537 245 aaKnown RBP7.3□□□□□ -1.24
RGPD1-206ENST00000641458 GRM4Q14833 912 aa7.3□□□□□ -1.24
RGPD1-206ENST00000641458 RAB3GAP1Q15042 981 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms