RNA–Protein interactions for RNA: ENST00000640909.1

KCNC1-213, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 1,270 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-213ENST00000640909 ZKSCAN1P17029 563 aaPredicted RBP18.33■□□□□ 0.52
KCNC1-213ENST00000640909 CYP2B6P20813 491 aa18.33■□□□□ 0.52
KCNC1-213ENST00000640909 PRDX5P30044 214 aa18.33■□□□□ 0.52
KCNC1-213ENST00000640909 ZSCAN29Q8IWY8 852 aaPredicted RBP18.33■□□□□ 0.52
KCNC1-213ENST00000640909 SUCLG2Q96I99 432 aa18.33■□□□□ 0.52
KCNC1-213ENST00000640909 OSBPL5Q9H0X9 879 aaPredicted RBP18.33■□□□□ 0.52
KCNC1-213ENST00000640909 MYH2Q9UKX2 1941 aa18.33■□□□□ 0.52
KCNC1-213ENST00000640909 GAKO14976 1311 aa18.32■□□□□ 0.52
KCNC1-213ENST00000640909 ZBTB22O15209 634 aa18.32■□□□□ 0.52
KCNC1-213ENST00000640909 CACNB2Q08289 660 aaPredicted RBP18.32■□□□□ 0.52
KCNC1-213ENST00000640909 ZNF280CQ8ND82 737 aa18.32■□□□□ 0.52
KCNC1-213ENST00000640909 MYLIPQ8WY64 445 aa18.32■□□□□ 0.52
KCNC1-213ENST00000640909 SRCIN1Q9C0H9 1055 aa18.32■□□□□ 0.52
KCNC1-213ENST00000640909 ASCC2Q9H1I8 757 aaPredicted RBP18.32■□□□□ 0.52
KCNC1-213ENST00000640909 VAMP4O75379 141 aa18.31■□□□□ 0.52
KCNC1-213ENST00000640909 SLC5A1P13866 664 aa18.31■□□□□ 0.52
KCNC1-213ENST00000640909 PDE3AQ14432 1141 aa18.31■□□□□ 0.52
KCNC1-213ENST00000640909 NCBP3Q53F19 620 aaKnown RBP18.31■□□□□ 0.52
KCNC1-213ENST00000640909 SH3D19Q5HYK7 790 aa18.31■□□□□ 0.52
KCNC1-213ENST00000640909 SH3BP5LQ7L8J4 393 aa18.31■□□□□ 0.52
KCNC1-213ENST00000640909 WWC1Q8IX03 1113 aa18.31■□□□□ 0.52
KCNC1-213ENST00000640909 LPIN2Q92539 896 aa18.31■□□□□ 0.52
KCNC1-213ENST00000640909 FANCIQ9NVI1 1328 aa18.3■□□□□ 0.52
KCNC1-213ENST00000640909 MSCO60682 206 aa18.3■□□□□ 0.52
KCNC1-213ENST00000640909 MAPK4P31152 587 aa18.3■□□□□ 0.52
KCNC1-213ENST00000640909 ZGPATQ8N5A5 531 aaKnown RBP18.3■□□□□ 0.52
KCNC1-213ENST00000640909 DDTLA6NHG4 134 aaPredicted RBP18.29■□□□□ 0.52
KCNC1-213ENST00000640909 SEMA3EO15041 775 aa18.29■□□□□ 0.52
KCNC1-213ENST00000640909 NPM3O75607 178 aaKnown RBP18.29■□□□□ 0.52
KCNC1-213ENST00000640909 RGS2P41220 211 aa18.29■□□□□ 0.52
KCNC1-213ENST00000640909 HMGCS2P54868 508 aa18.29■□□□□ 0.52
KCNC1-213ENST00000640909 SPP2Q13103 211 aa18.29■□□□□ 0.52
KCNC1-213ENST00000640909 SLF2Q8IX21 1173 aa18.29■□□□□ 0.52
KCNC1-213ENST00000640909 USP6NLQ92738 828 aa18.29■□□□□ 0.52
KCNC1-213ENST00000640909 APBA2Q99767 749 aa18.29■□□□□ 0.52
KCNC1-213ENST00000640909 SENP6Q9GZR1 1112 aaPredicted RBP18.29■□□□□ 0.52
KCNC1-213ENST00000640909 TTYH1Q9H313 450 aaPredicted RBP18.29■□□□□ 0.52
KCNC1-213ENST00000640909 BICC1Q9H694 974 aaKnown RBP18.29■□□□□ 0.52
KCNC1-213ENST00000640909 TTC28Q96AY4 2481 aa18.28■□□□□ 0.52
KCNC1-213ENST00000640909 NBPF7P0C2Y1 421 aaPredicted RBP18.28■□□□□ 0.52
KCNC1-213ENST00000640909 CCND3P30281 292 aaPredicted RBP18.28■□□□□ 0.52
KCNC1-213ENST00000640909 HOXA7P31268 230 aaPredicted RBP18.28■□□□□ 0.52
KCNC1-213ENST00000640909 GPRC5AQ8NFJ5 357 aa18.28■□□□□ 0.52
KCNC1-213ENST00000640909 GTF3C2Q8WUA4 911 aaPredicted RBP18.28■□□□□ 0.52
KCNC1-213ENST00000640909 FAM122AQ96E09 287 aa18.28■□□□□ 0.52
KCNC1-213ENST00000640909 AS3MTQ9HBK9 375 aa18.28■□□□□ 0.52
KCNC1-213ENST00000640909 GNL3LQ9NVN8 582 aaKnown RBP18.28■□□□□ 0.52
KCNC1-213ENST00000640909 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.28■□□□□ 0.52
KCNC1-213ENST00000640909 DNM1LO00429 736 aa18.27■□□□□ 0.52
KCNC1-213ENST00000640909 IRX3P78415 501 aaPredicted RBP18.27■□□□□ 0.52
KCNC1-213ENST00000640909 SHHQ15465 462 aa18.27■□□□□ 0.52
KCNC1-213ENST00000640909 CCDC84Q86UT8 332 aaPredicted RBP18.27■□□□□ 0.52
KCNC1-213ENST00000640909 FAM163AQ96GL9 167 aaPredicted RBP18.27■□□□□ 0.52
KCNC1-213ENST00000640909 DENND2AQ9ULE3 1009 aa18.27■□□□□ 0.52
KCNC1-213ENST00000640909 RLFQ13129 1914 aa18.27■□□□□ 0.51
KCNC1-213ENST00000640909 ANKRD44Q8N8A2 993 aa18.26■□□□□ 0.51
KCNC1-213ENST00000640909 LPAR1Q92633 364 aa18.26■□□□□ 0.51
KCNC1-213ENST00000640909 USP17L5A8MUK1 530 aa18.25■□□□□ 0.51
KCNC1-213ENST00000640909 RTP1P59025 263 aa18.25■□□□□ 0.51
KCNC1-213ENST00000640909 MORN1Q5T089 497 aa18.25■□□□□ 0.51
KCNC1-213ENST00000640909 SLC4A10Q6U841 1118 aa18.25■□□□□ 0.51
KCNC1-213ENST00000640909 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.25■□□□□ 0.51
KCNC1-213ENST00000640909 DDX4Q9NQI0 724 aaKnown RBP18.25■□□□□ 0.51
KCNC1-213ENST00000640909 MAP4K4O95819 1239 aaPredicted RBP18.24■□□□□ 0.51
KCNC1-213ENST00000640909 CAP2P40123 477 aa18.24■□□□□ 0.51
KCNC1-213ENST00000640909 HERVK_113P62684 666 aa18.24■□□□□ 0.51
KCNC1-213ENST00000640909 C9orf50Q5SZB4 431 aa18.24■□□□□ 0.51
KCNC1-213ENST00000640909 GPR142Q7Z601 462 aa18.24■□□□□ 0.51
KCNC1-213ENST00000640909 PRKRIP1Q9H875 184 aaPredicted RBP18.24■□□□□ 0.51
KCNC1-213ENST00000640909 DDX20Q9UHI6 824 aaKnown RBP18.24■□□□□ 0.51
KCNC1-213ENST00000640909 PDS5AQ29RF7 1337 aaKnown RBP18.23■□□□□ 0.51
KCNC1-213ENST00000640909 EYA2O00167 538 aa18.23■□□□□ 0.51
KCNC1-213ENST00000640909 HOXD11P31277 338 aaPredicted RBP18.23■□□□□ 0.51
KCNC1-213ENST00000640909 ERVK-9P63128 1117 aa18.23■□□□□ 0.51
KCNC1-213ENST00000640909 ERVK-24P63145 666 aa18.23■□□□□ 0.51
KCNC1-213ENST00000640909 PICALMQ13492 652 aa18.23■□□□□ 0.51
KCNC1-213ENST00000640909 DZIP1Q86YF9 867 aaKnown RBP18.23■□□□□ 0.51
KCNC1-213ENST00000640909 CCAR1Q8IX12 1150 aaKnown RBP18.23■□□□□ 0.51
KCNC1-213ENST00000640909 ATXN2LQ8WWM7 1075 aaKnown RBP18.23■□□□□ 0.51
KCNC1-213ENST00000640909 WDR18Q9BV38 432 aa18.23■□□□□ 0.51
KCNC1-213ENST00000640909 TXNRD2Q9NNW7 524 aa18.23■□□□□ 0.51
KCNC1-213ENST00000640909 SLURP2P0DP57 97 aa18.22■□□□□ 0.51
KCNC1-213ENST00000640909 ATN1P54259 1190 aaPredicted RBP18.22■□□□□ 0.51
KCNC1-213ENST00000640909 BACE1P56817 501 aa18.22■□□□□ 0.51
KCNC1-213ENST00000640909 CCL14Q16627 93 aa18.22■□□□□ 0.51
KCNC1-213ENST00000640909 MFSD14CQ5VZR4 134 aa18.22■□□□□ 0.51
KCNC1-213ENST00000640909 PLEKHH3Q7Z736 793 aa18.22■□□□□ 0.51
KCNC1-213ENST00000640909 KLHDC4Q8TBB5 520 aa18.22■□□□□ 0.51
KCNC1-213ENST00000640909 TMOD4Q9NZQ9 345 aa18.22■□□□□ 0.51
KCNC1-213ENST00000640909 HERC5Q9UII4 1024 aaKnown RBP18.22■□□□□ 0.51
KCNC1-213ENST00000640909 FBXO3Q9UK99 471 aa18.22■□□□□ 0.51
KCNC1-213ENST00000640909 MROH7-TTC4A0A0A0MT08 1334 aa18.22■□□□□ 0.51
KCNC1-213ENST00000640909 BTDP43251 543 aa18.21■□□□□ 0.51
KCNC1-213ENST00000640909 EXOSC9Q06265 439 aaKnown RBP18.21■□□□□ 0.51
KCNC1-213ENST00000640909 SNX17Q15036 470 aa18.21■□□□□ 0.51
KCNC1-213ENST00000640909 P2RX7Q99572 595 aaKnown RBP18.21■□□□□ 0.51
KCNC1-213ENST00000640909 ARIH1Q9Y4X5 557 aaPredicted RBP18.21■□□□□ 0.51
KCNC1-213ENST00000640909 C19orf81C9J6K1 198 aa18.2■□□□□ 0.5
KCNC1-213ENST00000640909 GLRX3O76003 335 aaKnown RBP18.2■□□□□ 0.5
KCNC1-213ENST00000640909 MAP2K5Q13163 448 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms