RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 SEMA3EO15041 775 aa14.35□□□□□ -0.11
ERGIC3-220ENST00000640748 ERC2O15083 957 aa14.35□□□□□ -0.11
ERGIC3-220ENST00000640748 SLURP2P0DP57 97 aa14.35□□□□□ -0.11
ERGIC3-220ENST00000640748 BCRP11274 1271 aa14.35□□□□□ -0.11
ERGIC3-220ENST00000640748 IL15P40933 162 aaPredicted RBP14.35□□□□□ -0.11
ERGIC3-220ENST00000640748 RASGRF1Q13972 1273 aa14.35□□□□□ -0.11
ERGIC3-220ENST00000640748 TSHZ3Q63HK5 1081 aa14.35□□□□□ -0.11
ERGIC3-220ENST00000640748 CCDC102BQ68D86 513 aa14.35□□□□□ -0.11
ERGIC3-220ENST00000640748 AACSQ86V21 672 aa14.35□□□□□ -0.11
ERGIC3-220ENST00000640748 IDI2Q9BXS1 227 aa14.35□□□□□ -0.11
ERGIC3-220ENST00000640748 GNL3LQ9NVN8 582 aaKnown RBP14.35□□□□□ -0.11
ERGIC3-220ENST00000640748 DENND2AQ9ULE3 1009 aa14.35□□□□□ -0.11
ERGIC3-220ENST00000640748 COLQQ9Y215 455 aaPredicted RBP14.35□□□□□ -0.11
ERGIC3-220ENST00000640748 H0YGN5 161 aa14.34□□□□□ -0.11
ERGIC3-220ENST00000640748 GLRX3O76003 335 aaKnown RBP14.34□□□□□ -0.11
ERGIC3-220ENST00000640748 CYP2C8P10632 490 aa14.34□□□□□ -0.11
ERGIC3-220ENST00000640748 MAP3K10Q02779 954 aa14.34□□□□□ -0.11
ERGIC3-220ENST00000640748 RILPL2Q969X0 211 aa14.34□□□□□ -0.11
ERGIC3-220ENST00000640748 ECHDC1Q9NTX5 307 aa14.34□□□□□ -0.11
ERGIC3-220ENST00000640748 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.34□□□□□ -0.11
ERGIC3-220ENST00000640748 RANBP2P49792 3224 aaKnown RBP14.33□□□□□ -0.12
ERGIC3-220ENST00000640748 A0A0G2JLL6 359 aaPredicted RBP14.33□□□□□ -0.12
ERGIC3-220ENST00000640748 DDTLA6NHG4 134 aaPredicted RBP14.33□□□□□ -0.12
ERGIC3-220ENST00000640748 CXCL11O14625 94 aa14.33□□□□□ -0.12
ERGIC3-220ENST00000640748 ENTPD3O75355 529 aa14.33□□□□□ -0.12
ERGIC3-220ENST00000640748 PTPRAP18433 802 aa14.33□□□□□ -0.12
ERGIC3-220ENST00000640748 TIMM10P62072 90 aa14.33□□□□□ -0.12
ERGIC3-220ENST00000640748 PRRT2Q7Z6L0 340 aaPredicted RBP14.33□□□□□ -0.12
ERGIC3-220ENST00000640748 UBE2Q1Q7Z7E8 422 aa14.33□□□□□ -0.12
ERGIC3-220ENST00000640748 SCYL3Q8IZE3 742 aa14.33□□□□□ -0.12
ERGIC3-220ENST00000640748 PI4K2BQ8TCG2 481 aa14.33□□□□□ -0.12
ERGIC3-220ENST00000640748 ZNF384Q8TF68 577 aa14.33□□□□□ -0.12
ERGIC3-220ENST00000640748 DDX4Q9NQI0 724 aaKnown RBP14.33□□□□□ -0.12
ERGIC3-220ENST00000640748 FMNL1O95466 1100 aaPredicted RBP14.32□□□□□ -0.12
ERGIC3-220ENST00000640748 GRK4P32298 578 aa14.32□□□□□ -0.12
ERGIC3-220ENST00000640748 EAF2Q96CJ1 260 aaPredicted RBP14.32□□□□□ -0.12
ERGIC3-220ENST00000640748 FAM163AQ96GL9 167 aaPredicted RBP14.32□□□□□ -0.12
ERGIC3-220ENST00000640748 PARK7Q99497 189 aaKnown RBP14.32□□□□□ -0.12
ERGIC3-220ENST00000640748 AFG3L2Q9Y4W6 797 aa14.32□□□□□ -0.12
ERGIC3-220ENST00000640748 ZHX2Q9Y6X8 837 aa14.32□□□□□ -0.12
ERGIC3-220ENST00000640748 PDS5AQ29RF7 1337 aaKnown RBP14.32□□□□□ -0.12
ERGIC3-220ENST00000640748 MYPNQ86TC9 1320 aa14.32□□□□□ -0.12
ERGIC3-220ENST00000640748 TRIOBPQ9H2D6 2365 aa14.32□□□□□ -0.12
ERGIC3-220ENST00000640748 RBM25P49756 843 aaKnown RBP14.31□□□□□ -0.12
ERGIC3-220ENST00000640748 PRKCZQ05513 592 aa14.31□□□□□ -0.12
ERGIC3-220ENST00000640748 TFCP2Q12800 502 aa14.31□□□□□ -0.12
ERGIC3-220ENST00000640748 TNNI3KQ59H18 835 aa14.31□□□□□ -0.12
ERGIC3-220ENST00000640748 RAET1EQ8TD07 263 aa14.31□□□□□ -0.12
ERGIC3-220ENST00000640748 CCDC8Q9H0W5 538 aaPredicted RBP14.31□□□□□ -0.12
ERGIC3-220ENST00000640748 GPR108Q9NPR9 543 aa14.31□□□□□ -0.12
ERGIC3-220ENST00000640748 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.31□□□□□ -0.12
ERGIC3-220ENST00000640748 DAXXQ9UER7 740 aaPredicted RBP14.31□□□□□ -0.12
ERGIC3-220ENST00000640748 GABRQQ9UN88 632 aa14.31□□□□□ -0.12
ERGIC3-220ENST00000640748 FPGT-TNNI3KV9GXZ4 949 aa14.31□□□□□ -0.12
ERGIC3-220ENST00000640748 DOCK2Q92608 1830 aa14.31□□□□□ -0.12
ERGIC3-220ENST00000640748 MYH2Q9UKX2 1941 aa14.31□□□□□ -0.12
ERGIC3-220ENST00000640748 A0A1B0GUL7 405 aa14.3□□□□□ -0.12
ERGIC3-220ENST00000640748 CCL5P13501 91 aa14.3□□□□□ -0.12
ERGIC3-220ENST00000640748 HOXD10P28358 340 aa14.3□□□□□ -0.12
ERGIC3-220ENST00000640748 GJA8P48165 433 aa14.3□□□□□ -0.12
ERGIC3-220ENST00000640748 RHBDL3P58872 404 aa14.3□□□□□ -0.12
ERGIC3-220ENST00000640748 ERICH6Q7L0X2 663 aa14.3□□□□□ -0.12
ERGIC3-220ENST00000640748 DZIP1Q86YF9 867 aaKnown RBP14.3□□□□□ -0.12
ERGIC3-220ENST00000640748 ZGPATQ8N5A5 531 aaKnown RBP14.3□□□□□ -0.12
ERGIC3-220ENST00000640748 XAGE2Q96GT9 111 aa14.3□□□□□ -0.12
ERGIC3-220ENST00000640748 PICK1Q9NRD5 415 aa14.3□□□□□ -0.12
ERGIC3-220ENST00000640748 SZT2Q5T011 3432 aa14.29□□□□□ -0.12
ERGIC3-220ENST00000640748 GPR75-ASB3A0A0A6YYF3 556 aa14.29□□□□□ -0.12
ERGIC3-220ENST00000640748 CTNND1O60716 968 aaKnown RBP14.29□□□□□ -0.12
ERGIC3-220ENST00000640748 REC8O95072 547 aa14.29□□□□□ -0.12
ERGIC3-220ENST00000640748 GJB1P08034 283 aa14.29□□□□□ -0.12
ERGIC3-220ENST00000640748 BTDP43251 543 aa14.29□□□□□ -0.12
ERGIC3-220ENST00000640748 FCGRTP55899 365 aa14.29□□□□□ -0.12
ERGIC3-220ENST00000640748 MECOMQ03112 1051 aa14.29□□□□□ -0.12
ERGIC3-220ENST00000640748 BECN1Q14457 450 aa14.29□□□□□ -0.12
ERGIC3-220ENST00000640748 FASTKD5Q7L8L6 764 aaKnown RBP14.29□□□□□ -0.12
ERGIC3-220ENST00000640748 CCDC84Q86UT8 332 aaPredicted RBP14.29□□□□□ -0.12
ERGIC3-220ENST00000640748 ABCF2Q9UG63 623 aa14.29□□□□□ -0.12
ERGIC3-220ENST00000640748 SLC45A1Q9Y2W3 748 aa14.29□□□□□ -0.12
ERGIC3-220ENST00000640748 MROH7-TTC4A0A0A0MT08 1334 aa14.29□□□□□ -0.12
ERGIC3-220ENST00000640748 MAP4K4O95819 1239 aaPredicted RBP14.28□□□□□ -0.12
ERGIC3-220ENST00000640748 PTPRFP10586 1907 aa14.28□□□□□ -0.12
ERGIC3-220ENST00000640748 CHMLP26374 656 aa14.28□□□□□ -0.12
ERGIC3-220ENST00000640748 PICALMQ13492 652 aa14.28□□□□□ -0.12
ERGIC3-220ENST00000640748 PI16Q6UXB8 463 aa14.28□□□□□ -0.12
ERGIC3-220ENST00000640748 ZSCAN29Q8IWY8 852 aaPredicted RBP14.28□□□□□ -0.12
ERGIC3-220ENST00000640748 PHIPQ8WWQ0 1821 aa14.28□□□□□ -0.12
ERGIC3-220ENST00000640748 UNC93B1Q9H1C4 597 aa14.28□□□□□ -0.12
ERGIC3-220ENST00000640748 TRIM75PA6NK02 468 aa14.27□□□□□ -0.13
ERGIC3-220ENST00000640748 FLT3LGP49771 235 aa14.27□□□□□ -0.13
ERGIC3-220ENST00000640748 GADL1Q6ZQY3 521 aa14.27□□□□□ -0.13
ERGIC3-220ENST00000640748 NKX2-3Q8TAU0 364 aa14.27□□□□□ -0.13
ERGIC3-220ENST00000640748 EVI5LQ96CN4 794 aa14.27□□□□□ -0.13
ERGIC3-220ENST00000640748 ESYT1Q9BSJ8 1104 aa14.27□□□□□ -0.13
ERGIC3-220ENST00000640748 RNF208Q9H0X6 261 aa14.27□□□□□ -0.13
ERGIC3-220ENST00000640748 TLR7Q9NYK1 1049 aaKnown RBP14.27□□□□□ -0.13
ERGIC3-220ENST00000640748 HMG20BQ9P0W2 317 aa14.27□□□□□ -0.13
ERGIC3-220ENST00000640748 MGAMO43451 1857 aa14.27□□□□□ -0.13
ERGIC3-220ENST00000640748 DOCK1Q14185 1865 aa14.27□□□□□ -0.13
ERGIC3-220ENST00000640748 FAM196BA6NMK8 535 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms