RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 PPP1R7Q15435 360 aa9.22□□□□□ -0.93
NECAP1-227ENST00000640648 ZCRB1Q8TBF4 217 aaKnown RBP9.22□□□□□ -0.93
NECAP1-227ENST00000640648 PDE11AQ9HCR9 933 aa9.22□□□□□ -0.93
NECAP1-227ENST00000640648 SLC12A7Q9Y666 1083 aa9.22□□□□□ -0.93
NECAP1-227ENST00000640648 KLF18A0A0U1RQI7 1052 aa9.22□□□□□ -0.93
NECAP1-227ENST00000640648 DNA2P51530 1060 aa9.22□□□□□ -0.93
NECAP1-227ENST00000640648 MYL5Q02045 173 aa9.22□□□□□ -0.93
NECAP1-227ENST00000640648 IFIT5Q13325 482 aaKnown RBP9.22□□□□□ -0.93
NECAP1-227ENST00000640648 APBB1IPQ7Z5R6 666 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-227ENST00000640648 NUTM2AQ8IVF1 878 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-227ENST00000640648 ENAHQ8N8S7 591 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-227ENST00000640648 EIF2AQ9BY44 585 aaKnown RBP9.22□□□□□ -0.93
NECAP1-227ENST00000640648 KDM6BO15054 1643 aa9.22□□□□□ -0.93
NECAP1-227ENST00000640648 LMOD1P29536 600 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-227ENST00000640648 MARCKSP29966 332 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-227ENST00000640648 NBPF14Q5TI25 921 aa9.22□□□□□ -0.93
NECAP1-227ENST00000640648 PLVAPQ9BX97 442 aa9.22□□□□□ -0.93
NECAP1-227ENST00000640648 SLC24A3Q9HC58 644 aa9.22□□□□□ -0.93
NECAP1-227ENST00000640648 SOS1Q07889 1333 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-227ENST00000640648 STX10O60499 249 aa9.21□□□□□ -0.93
NECAP1-227ENST00000640648 ZNF569Q5MCW4 686 aa9.21□□□□□ -0.93
NECAP1-227ENST00000640648 CCDC197Q8NCU1 140 aa9.21□□□□□ -0.93
NECAP1-227ENST00000640648 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.21□□□□□ -0.93
NECAP1-227ENST00000640648 RNF14Q9UBS8 474 aa9.21□□□□□ -0.93
NECAP1-227ENST00000640648 MTRF1LQ9UGC7 380 aaKnown RBP9.21□□□□□ -0.93
NECAP1-227ENST00000640648 MRFAP1Q9Y605 127 aa9.21□□□□□ -0.93
NECAP1-227ENST00000640648 RPS6KA5O75582 802 aa9.21□□□□□ -0.93
NECAP1-227ENST00000640648 STMN1P16949 149 aa9.21□□□□□ -0.93
NECAP1-227ENST00000640648 IARSP41252 1262 aaKnown RBP9.21□□□□□ -0.93
NECAP1-227ENST00000640648 KMT5BQ4FZB7 885 aa9.21□□□□□ -0.93
NECAP1-227ENST00000640648 CREB3L3Q68CJ9 461 aa9.21□□□□□ -0.93
NECAP1-227ENST00000640648 CC2D1AQ6P1N0 951 aaPredicted RBP9.21□□□□□ -0.93
NECAP1-227ENST00000640648 PARVBQ9HBI1 364 aa9.21□□□□□ -0.93
NECAP1-227ENST00000640648 RGL1Q9NZL6 768 aa9.21□□□□□ -0.93
NECAP1-227ENST00000640648 GRM8O00222 908 aa9.21□□□□□ -0.94
NECAP1-227ENST00000640648 RNF40O75150 1001 aa9.21□□□□□ -0.94
NECAP1-227ENST00000640648 PODNQ7Z5L7 613 aa9.21□□□□□ -0.94
NECAP1-227ENST00000640648 ST13P4Q8IZP2 240 aaPredicted RBP9.21□□□□□ -0.94
NECAP1-227ENST00000640648 XAGE3Q8WTP9 111 aa9.21□□□□□ -0.94
NECAP1-227ENST00000640648 PPP1R12CQ9BZL4 782 aa9.21□□□□□ -0.94
NECAP1-227ENST00000640648 ATP6V0A4Q9HBG4 840 aa9.21□□□□□ -0.94
NECAP1-227ENST00000640648 ENO4A6NNW6 628 aa9.21□□□□□ -0.94
NECAP1-227ENST00000640648 TMCC1O94876 653 aa9.21□□□□□ -0.94
NECAP1-227ENST00000640648 TAF11Q15544 211 aa9.21□□□□□ -0.94
NECAP1-227ENST00000640648 BICDL1Q6ZP65 573 aa9.21□□□□□ -0.94
NECAP1-227ENST00000640648 COPS6Q7L5N1 327 aa9.21□□□□□ -0.94
NECAP1-227ENST00000640648 CCDC26Q8TAB7 109 aa9.21□□□□□ -0.94
NECAP1-227ENST00000640648 HNRNPLLQ8WVV9 542 aaKnown RBP9.21□□□□□ -0.94
NECAP1-227ENST00000640648 FRMD4BQ9Y2L6 1034 aa9.21□□□□□ -0.94
NECAP1-227ENST00000640648 RANBP6O60518 1105 aaKnown RBP9.2□□□□□ -0.94
NECAP1-227ENST00000640648 GSPT1P15170 499 aaKnown RBP9.2□□□□□ -0.94
NECAP1-227ENST00000640648 GRAMD4Q6IC98 578 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 ANKRD13DQ6ZTN6 518 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 C17orf50Q8WW18 174 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 SHANK2Q9UPX8 1470 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 SYKP43405 635 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 FAM160A1Q05DH4 1040 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 SOGA3Q5TF21 947 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 CYP26C1Q6V0L0 522 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 IFT81Q8WYA0 676 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 SEPT11Q9NVA2 429 aaKnown RBP9.2□□□□□ -0.94
NECAP1-227ENST00000640648 YEATS2Q9ULM3 1422 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 PNMA6EA0A0J9YXQ4 647 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 E7EVH7 732 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 LAMB3Q13751 1172 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 LCA5Q86VQ0 697 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 SREK1Q8WXA9 508 aaKnown RBP9.2□□□□□ -0.94
NECAP1-227ENST00000640648 EYA1Q99502 592 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 CTDP1Q9Y5B0 961 aaPredicted RBP9.2□□□□□ -0.94
NECAP1-227ENST00000640648 KIF24Q5T7B8 1368 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 MEFVO15553 781 aaPredicted RBP9.2□□□□□ -0.94
NECAP1-227ENST00000640648 AHCYL1O43865 530 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 E2F6O75461 281 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 RHOXF2BP0C7M4 288 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 METAP2P50579 478 aaKnown RBP eCLIP9.2□□□□□ -0.94
NECAP1-227ENST00000640648 RBM6P78332 1123 aaKnown RBP9.2□□□□□ -0.94
NECAP1-227ENST00000640648 SSRP1Q08945 709 aaKnown RBP9.2□□□□□ -0.94
NECAP1-227ENST00000640648 TMEM67Q5HYA8 995 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 LEO1Q8WVC0 666 aaPredicted RBP9.2□□□□□ -0.94
NECAP1-227ENST00000640648 RHOXF2Q9BQY4 288 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 SLC26A6Q9BXS9 759 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 MAGI2Q86UL8 1455 aa9.2□□□□□ -0.94
NECAP1-227ENST00000640648 LRRIQ3A6PVS8 624 aaPredicted RBP9.19□□□□□ -0.94
NECAP1-227ENST00000640648 SLC4A8Q2Y0W8 1093 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 FYB2Q5VWT5 728 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 TXLNGQ9NUQ3 528 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 ARHGAP10A1A4S6 786 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 CD2BP2O95400 341 aaKnown RBP9.19□□□□□ -0.94
NECAP1-227ENST00000640648 CPP00450 1065 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 CNGA1P29973 690 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 PSMC4P43686 418 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 BLVRAP53004 296 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 PRPF4BQ13523 1007 aaKnown RBP9.19□□□□□ -0.94
NECAP1-227ENST00000640648 LMBR1LQ6UX01 489 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 PPP1R21Q6ZMI0 780 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 LDHAL6AQ6ZMR3 332 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.19□□□□□ -0.942e-6■■■■■ 29
NECAP1-227ENST00000640648 PPP1R9AQ9ULJ8 1098 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 EPHB4P54760 987 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 CCDC13Q8IYE1 715 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms