RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 RAI14Q9P0K7 980 aa10.82□□□□□ -0.68
NECAP1-225ENST00000640209 ZNF804BA4D1E1 1349 aa10.82□□□□□ -0.68
NECAP1-225ENST00000640209 STK36Q9NRP7 1315 aa10.82□□□□□ -0.68
NECAP1-225ENST00000640209 LAMB2P55268 1798 aa10.82□□□□□ -0.68
NECAP1-225ENST00000640209 FOXN1O15353 648 aa10.81□□□□□ -0.68
NECAP1-225ENST00000640209 GNAT2P19087 354 aa10.81□□□□□ -0.68
NECAP1-225ENST00000640209 NR5A1Q13285 461 aa10.81□□□□□ -0.68
NECAP1-225ENST00000640209 CCDC24Q8N4L8 307 aa10.81□□□□□ -0.68
NECAP1-225ENST00000640209 RGS22Q8NE09 1264 aa10.81□□□□□ -0.68
NECAP1-225ENST00000640209 OXER1Q8TDS5 423 aa10.81□□□□□ -0.68
NECAP1-225ENST00000640209 NUP133Q8WUM0 1156 aa10.81□□□□□ -0.68
NECAP1-225ENST00000640209 RIOK1Q9BRS2 568 aaKnown RBP10.81□□□□□ -0.68
NECAP1-225ENST00000640209 NACAP1Q9BZK3 213 aa10.81□□□□□ -0.68
NECAP1-225ENST00000640209 XPO4Q9C0E2 1151 aaKnown RBP10.81□□□□□ -0.68
NECAP1-225ENST00000640209 NAT10Q9H0A0 1025 aaKnown RBP10.81□□□□□ -0.68
NECAP1-225ENST00000640209 NID2Q14112 1375 aa10.81□□□□□ -0.68
NECAP1-225ENST00000640209 MMP1P03956 469 aa10.81□□□□□ -0.68
NECAP1-225ENST00000640209 RBM6P78332 1123 aaKnown RBP10.81□□□□□ -0.68
NECAP1-225ENST00000640209 TRIM29Q14134 588 aa10.81□□□□□ -0.68
NECAP1-225ENST00000640209 SEC23AQ15436 765 aa10.81□□□□□ -0.68
NECAP1-225ENST00000640209 SLC51AQ86UW1 340 aa10.81□□□□□ -0.68
NECAP1-225ENST00000640209 METTL16Q86W50 562 aaKnown RBP10.81□□□□□ -0.68
NECAP1-225ENST00000640209 DIS3L2Q8IYB7 885 aaKnown RBP10.81□□□□□ -0.68
NECAP1-225ENST00000640209 ZNF654Q8IZM8 581 aa10.81□□□□□ -0.68
NECAP1-225ENST00000640209 CRACR2BQ8N4Y2 399 aaPredicted RBP10.81□□□□□ -0.68
NECAP1-225ENST00000640209 BCL2L12Q9HB09 334 aa10.81□□□□□ -0.68
NECAP1-225ENST00000640209 IFNKQ9P0W0 207 aa10.81□□□□□ -0.68
NECAP1-225ENST00000640209 MINPP1Q9UNW1 487 aa10.81□□□□□ -0.68
NECAP1-225ENST00000640209 CACNA1SQ13698 1873 aa10.8□□□□□ -0.68
NECAP1-225ENST00000640209 MAGEB6P1A0A0J9YX57 407 aa10.8□□□□□ -0.68
NECAP1-225ENST00000640209 FAM237AA0A1B0GTK4 181 aa10.8□□□□□ -0.68
NECAP1-225ENST00000640209 hCG_1642624A0A1W2PR95 340 aa10.8□□□□□ -0.68
NECAP1-225ENST00000640209 PRDM1O75626 825 aa10.8□□□□□ -0.68
NECAP1-225ENST00000640209 SKILP12757 684 aa10.8□□□□□ -0.68
NECAP1-225ENST00000640209 ATP1A3P13637 1013 aa10.8□□□□□ -0.68
NECAP1-225ENST00000640209 TBC1D9BQ66K14 1250 aa10.8□□□□□ -0.68
NECAP1-225ENST00000640209 ANKRD18AQ8IVF6 992 aa10.8□□□□□ -0.68
NECAP1-225ENST00000640209 NOSTRINQ8IVI9 506 aa10.8□□□□□ -0.68
NECAP1-225ENST00000640209 FAM84BQ96KN1 310 aaPredicted RBP10.8□□□□□ -0.68
NECAP1-225ENST00000640209 BPIFA3Q9BQP9 254 aa10.8□□□□□ -0.68
NECAP1-225ENST00000640209 TUBE1Q9UJT0 475 aa10.8□□□□□ -0.68
NECAP1-225ENST00000640209 A0A1B0GUL6 1792 aa10.8□□□□□ -0.68
NECAP1-225ENST00000640209 FAM205CA6NFA0 338 aa10.8□□□□□ -0.68
NECAP1-225ENST00000640209 TNNT1P13805 278 aa10.8□□□□□ -0.68
NECAP1-225ENST00000640209 LMOD1P29536 600 aaPredicted RBP10.8□□□□□ -0.68
NECAP1-225ENST00000640209 FANCBQ8NB91 859 aa10.8□□□□□ -0.68
NECAP1-225ENST00000640209 TIGD1Q96MW7 591 aa10.8□□□□□ -0.68
NECAP1-225ENST00000640209 CDC5LQ99459 802 aaKnown RBP10.8□□□□□ -0.68
NECAP1-225ENST00000640209 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.8□□□□□ -0.68
NECAP1-225ENST00000640209 COL5A3P25940 1745 aaPredicted RBP10.79□□□□□ -0.68
NECAP1-225ENST00000640209 SMC2O95347 1197 aa10.79□□□□□ -0.68
NECAP1-225ENST00000640209 BMP6P22004 513 aa10.79□□□□□ -0.68
NECAP1-225ENST00000640209 SF3B3Q15393 1217 aaKnown RBP10.79□□□□□ -0.68
NECAP1-225ENST00000640209 PTPN21Q16825 1174 aa10.79□□□□□ -0.68
NECAP1-225ENST00000640209 TPD52L1Q16890 204 aaPredicted RBP10.79□□□□□ -0.68
NECAP1-225ENST00000640209 DPF2Q92785 391 aa10.79□□□□□ -0.68
NECAP1-225ENST00000640209 SRP68Q9UHB9 627 aaKnown RBP10.79□□□□□ -0.68
NECAP1-225ENST00000640209 PCDHB6Q9Y5E3 794 aa10.79□□□□□ -0.68
NECAP1-225ENST00000640209 BAZ2AQ9UIF9 1905 aaKnown RBP10.79□□□□□ -0.68
NECAP1-225ENST00000640209 TNKSO95271 1327 aa10.79□□□□□ -0.68
NECAP1-225ENST00000640209 CUTAO60888 179 aa10.79□□□□□ -0.68
NECAP1-225ENST00000640209 ATP2B1P20020 1258 aa10.79□□□□□ -0.68
NECAP1-225ENST00000640209 PDE4BQ07343 736 aa10.79□□□□□ -0.68
NECAP1-225ENST00000640209 ZRSR1Q15695 479 aaKnown RBP10.79□□□□□ -0.68
NECAP1-225ENST00000640209 FAM98CQ17RN3 349 aaKnown RBP10.79□□□□□ -0.68
NECAP1-225ENST00000640209 EARS2Q5JPH6 523 aaKnown RBP10.79□□□□□ -0.68
NECAP1-225ENST00000640209 ARMCX5Q6P1M9 558 aa10.79□□□□□ -0.68
NECAP1-225ENST00000640209 BSDC1Q9NW68 430 aaPredicted RBP10.79□□□□□ -0.68
NECAP1-225ENST00000640209 TRMT1Q9NXH9 659 aaKnown RBP10.79□□□□□ -0.68
NECAP1-225ENST00000640209 FBXO2Q9UK22 296 aaPredicted RBP10.79□□□□□ -0.68
NECAP1-225ENST00000640209 KCNH3Q9ULD8 1083 aa10.79□□□□□ -0.68
NECAP1-225ENST00000640209 CASZ1Q86V15 1759 aa10.79□□□□□ -0.68
NECAP1-225ENST00000640209 MYH2Q9UKX2 1941 aa10.79□□□□□ -0.68
NECAP1-225ENST00000640209 MDM2Q00987 491 aaPredicted RBP10.78□□□□□ -0.68
NECAP1-225ENST00000640209 UBE4AQ14139 1066 aa10.78□□□□□ -0.68
NECAP1-225ENST00000640209 NAA30Q147X3 362 aaPredicted RBP10.78□□□□□ -0.68
NECAP1-225ENST00000640209 KRBA2Q6ZNG9 492 aa10.78□□□□□ -0.68
NECAP1-225ENST00000640209 BARGINQ6ZT62 677 aa10.78□□□□□ -0.68
NECAP1-225ENST00000640209 USP49Q70CQ1 688 aa10.78□□□□□ -0.68
NECAP1-225ENST00000640209 TMC6Q7Z403 805 aa10.78□□□□□ -0.68
NECAP1-225ENST00000640209 AMIGO3Q86WK7 504 aa10.78□□□□□ -0.68
NECAP1-225ENST00000640209 ENAHQ8N8S7 591 aaPredicted RBP10.78□□□□□ -0.68
NECAP1-225ENST00000640209 JMYQ8N9B5 988 aa10.78□□□□□ -0.68
NECAP1-225ENST00000640209 OSBPL5Q9H0X9 879 aaPredicted RBP10.78□□□□□ -0.68
NECAP1-225ENST00000640209 TFCP2L1Q9NZI6 479 aa10.78□□□□□ -0.68
NECAP1-225ENST00000640209 ANAPC4Q9UJX5 808 aa10.78□□□□□ -0.68
NECAP1-225ENST00000640209 ZNF652Q9Y2D9 606 aa10.78□□□□□ -0.68
NECAP1-225ENST00000640209 PCDHA5Q9Y5H7 936 aa10.78□□□□□ -0.68
NECAP1-225ENST00000640209 WNT7AO00755 349 aa10.78□□□□□ -0.68
NECAP1-225ENST00000640209 PLEKHA8P1O95397 391 aa10.78□□□□□ -0.68
NECAP1-225ENST00000640209 DEXIO95424 95 aa10.78□□□□□ -0.68
NECAP1-225ENST00000640209 PRR29P0C7W0 189 aa10.78□□□□□ -0.68
NECAP1-225ENST00000640209 FUT2Q10981 343 aa10.78□□□□□ -0.68
NECAP1-225ENST00000640209 SART3Q15020 963 aaKnown RBP10.78□□□□□ -0.68
NECAP1-225ENST00000640209 PKN1Q16512 942 aa10.78□□□□□ -0.68
NECAP1-225ENST00000640209 NOM1Q5C9Z4 860 aaKnown RBP10.78□□□□□ -0.68
NECAP1-225ENST00000640209 CLEC4GQ6UXB4 293 aa10.78□□□□□ -0.68
NECAP1-225ENST00000640209 TRIM22Q8IYM9 498 aa10.78□□□□□ -0.68
NECAP1-225ENST00000640209 GRAMD1CQ8IYS0 662 aa10.78□□□□□ -0.68
NECAP1-225ENST00000640209 KRI1Q8N9T8 703 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms