RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 PDE6AP16499 860 aa12.41□□□□□ -0.42
SCN1B-208ENST00000640135 RXRAP19793 462 aa12.41□□□□□ -0.42
SCN1B-208ENST00000640135 IFFO1Q0D2I5 559 aa12.41□□□□□ -0.42
SCN1B-208ENST00000640135 KIAA0753Q2KHM9 967 aa12.41□□□□□ -0.42
SCN1B-208ENST00000640135 WDR44Q5JSH3 913 aa12.41□□□□□ -0.42
SCN1B-208ENST00000640135 GALNT17Q6IS24 598 aa12.41□□□□□ -0.42
SCN1B-208ENST00000640135 DIS3L2Q8IYB7 885 aaKnown RBP12.41□□□□□ -0.42
SCN1B-208ENST00000640135 SELENOOQ9BVL4 669 aa12.41□□□□□ -0.42
SCN1B-208ENST00000640135 EPB41P11171 864 aaKnown RBP12.41□□□□□ -0.42
SCN1B-208ENST00000640135 CCNA1P78396 465 aa12.41□□□□□ -0.42
SCN1B-208ENST00000640135 CERKLQ49MI3 558 aaPredicted RBP12.41□□□□□ -0.42
SCN1B-208ENST00000640135 ISM2Q6H9L7 571 aa12.41□□□□□ -0.42
SCN1B-208ENST00000640135 MYCLP12524 364 aaPredicted RBP12.41□□□□□ -0.42
SCN1B-208ENST00000640135 GYG1P46976 350 aa12.41□□□□□ -0.42
SCN1B-208ENST00000640135 KIAA0825Q8IV33 1275 aa12.41□□□□□ -0.42
SCN1B-208ENST00000640135 REXO1Q8N1G1 1221 aaKnown RBP12.41□□□□□ -0.42
SCN1B-208ENST00000640135 FAM227BQ96M60 508 aa12.41□□□□□ -0.42
SCN1B-208ENST00000640135 PALLDQ8WX93 1383 aa12.41□□□□□ -0.42
SCN1B-208ENST00000640135 CDK12Q9NYV4 1490 aaPredicted RBP12.41□□□□□ -0.42
SCN1B-208ENST00000640135 CCDC66A2RUB6 948 aa12.4□□□□□ -0.42
SCN1B-208ENST00000640135 VWA3AA6NCI4 1184 aa12.4□□□□□ -0.42
SCN1B-208ENST00000640135 ADCY5O95622 1261 aa12.4□□□□□ -0.42
SCN1B-208ENST00000640135 ARID4AP29374 1257 aaPredicted RBP12.4□□□□□ -0.42
SCN1B-208ENST00000640135 CKAP4Q07065 602 aaKnown RBP12.4□□□□□ -0.42
SCN1B-208ENST00000640135 PRPF4BQ13523 1007 aaKnown RBP12.4□□□□□ -0.42
SCN1B-208ENST00000640135 DALRD3Q5D0E6 543 aaKnown RBP12.4□□□□□ -0.42
SCN1B-208ENST00000640135 SLC27A3Q5K4L6 730 aa12.4□□□□□ -0.42
SCN1B-208ENST00000640135 TTC38Q5R3I4 469 aa12.4□□□□□ -0.42
SCN1B-208ENST00000640135 GIMAP6Q6P9H5 292 aa12.4□□□□□ -0.42
SCN1B-208ENST00000640135 PLEKHF1Q96S99 279 aa12.4□□□□□ -0.42
SCN1B-208ENST00000640135 IWS1Q96ST2 819 aa12.4□□□□□ -0.42
SCN1B-208ENST00000640135 DNM3Q9UQ16 869 aa12.4□□□□□ -0.42
SCN1B-208ENST00000640135 JCADQ9P266 1359 aa12.4□□□□□ -0.42
SCN1B-208ENST00000640135 CUTAO60888 179 aa12.4□□□□□ -0.42
SCN1B-208ENST00000640135 AFF2P51816 1311 aa12.4□□□□□ -0.42
SCN1B-208ENST00000640135 PLA2R1Q13018 1463 aa12.4□□□□□ -0.42
SCN1B-208ENST00000640135 PRKG1Q13976 671 aa12.4□□□□□ -0.42
SCN1B-208ENST00000640135 ZNF174Q15697 407 aa12.4□□□□□ -0.42
SCN1B-208ENST00000640135 PIK3AP1Q6ZUJ8 805 aa12.4□□□□□ -0.42
SCN1B-208ENST00000640135 BBXQ8WY36 941 aaPredicted RBP12.4□□□□□ -0.42
SCN1B-208ENST00000640135 CCDC102AQ96A19 550 aa12.4□□□□□ -0.42
SCN1B-208ENST00000640135 FAM212AQ96EL1 285 aa12.4□□□□□ -0.42
SCN1B-208ENST00000640135 SNX14Q9Y5W7 946 aa12.4□□□□□ -0.42
SCN1B-208ENST00000640135 SSH2Q76I76 1423 aa12.4□□□□□ -0.43
SCN1B-208ENST00000640135 USP14P54578 494 aa12.4□□□□□ -0.43
SCN1B-208ENST00000640135 ANO1Q5XXA6 986 aa12.4□□□□□ -0.43
SCN1B-208ENST00000640135 TICAM2Q86XR7 235 aa12.4□□□□□ -0.43
SCN1B-208ENST00000640135 NT5C3AQ9H0P0 336 aa12.4□□□□□ -0.43
SCN1B-208ENST00000640135 LRWD1Q9UFC0 647 aa12.4□□□□□ -0.43
SCN1B-208ENST00000640135 SSX2IPQ9Y2D8 614 aa12.4□□□□□ -0.43
SCN1B-208ENST00000640135 OVOS2A0A0G2JMS6 1433 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 OVOS2A0A0J9YW53 1432 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 OVOS2Q6IE36 1432 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 CCNT1O60563 726 aaKnown RBP12.39□□□□□ -0.43
SCN1B-208ENST00000640135 SYT1P21579 422 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 BTDP43251 543 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 C8orf34Q49A92 452 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 VWA3BQ502W6 1294 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 IFNL3Q8IZI9 196 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 TACC1O75410 805 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 CFBP00751 764 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 FAM160A1Q05DH4 1040 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 OTUD6AQ7L8S5 288 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 DYDC1Q8WWB3 177 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 TSNARE1Q96NA8 513 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 GREM2Q9H772 168 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 PPM1FP49593 454 aaPredicted RBP12.39□□□□□ -0.43
SCN1B-208ENST00000640135 BCAMP50895 628 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 PIGBQ92521 554 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 FSD2A1L4K1 749 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 CALUO43852 315 aaPredicted RBP12.39□□□□□ -0.43
SCN1B-208ENST00000640135 DOK7Q18PE1 504 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 ANO6Q4KMQ2 910 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 TTLL6Q8N841 843 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 KIFAP3Q92845 792 aa12.39□□□□□ -0.43
SCN1B-208ENST00000640135 DHX36Q9H2U1 1008 aaKnown RBP12.39□□□□□ -0.43
SCN1B-208ENST00000640135 TNNT1P13805 278 aa12.38□□□□□ -0.43
SCN1B-208ENST00000640135 LMAN1P49257 510 aa12.38□□□□□ -0.43
SCN1B-208ENST00000640135 ICA1Q05084 483 aa12.38□□□□□ -0.43
SCN1B-208ENST00000640135 CTDSPL2Q05D32 466 aa12.38□□□□□ -0.43
SCN1B-208ENST00000640135 ZNF274Q96GC6 653 aaPredicted RBP12.38□□□□□ -0.43
SCN1B-208ENST00000640135 CCDC42Q96M95 316 aa12.38□□□□□ -0.43
SCN1B-208ENST00000640135 COMMD10Q9Y6G5 202 aa12.38□□□□□ -0.43
SCN1B-208ENST00000640135 CETN3O15182 167 aa12.38□□□□□ -0.43
SCN1B-208ENST00000640135 NLRP10Q86W26 655 aa12.38□□□□□ -0.43
SCN1B-208ENST00000640135 EAF2Q96CJ1 260 aaPredicted RBP12.38□□□□□ -0.43
SCN1B-208ENST00000640135 MASTLQ96GX5 879 aa12.38□□□□□ -0.43
SCN1B-208ENST00000640135 CCDC169A6NNP5 214 aa12.38□□□□□ -0.43
SCN1B-208ENST00000640135 FOSP01100 380 aaPredicted RBP12.38□□□□□ -0.43
SCN1B-208ENST00000640135 ZSCAN23Q3MJ62 389 aa12.38□□□□□ -0.43
SCN1B-208ENST00000640135 TRIM6Q9C030 488 aaPredicted RBP12.38□□□□□ -0.43
SCN1B-208ENST00000640135 JADE2Q9NQC1 790 aa12.38□□□□□ -0.43
SCN1B-208ENST00000640135 TNS3Q68CZ2 1445 aa12.38□□□□□ -0.43
SCN1B-208ENST00000640135 E7EWF7 191 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 H0YCG3 227 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 KRT86O43790 486 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 HSPA4P34932 840 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 TUBB4BP68371 445 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 FAM193AP78312 1265 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 SNW1Q13573 536 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms