RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 AGMOQ6ZNB7 445 aa8.67□□□□□ -1.02
CCDC7-216ENST00000640058 ABI1Q8IZP0 508 aa8.67□□□□□ -1.02
CCDC7-216ENST00000640058 FBRSQ9HAH7 460 aa8.67□□□□□ -1.02
CCDC7-216ENST00000640058 TLR6Q9Y2C9 796 aa8.67□□□□□ -1.02
CCDC7-216ENST00000640058 SORBS3O60504 671 aa8.66□□□□□ -1.02
CCDC7-216ENST00000640058 TFE3P19532 575 aaPredicted RBP8.66□□□□□ -1.02
CCDC7-216ENST00000640058 ITIH2P19823 946 aa8.66□□□□□ -1.02
CCDC7-216ENST00000640058 ETF1P62495 437 aaKnown RBP8.66□□□□□ -1.02
CCDC7-216ENST00000640058 MCTP1Q6DN14 999 aa8.66□□□□□ -1.02
CCDC7-216ENST00000640058 ZNF574Q6ZN55 896 aaPredicted RBP8.66□□□□□ -1.02
CCDC7-216ENST00000640058 ARMCX6Q7L4S7 300 aa8.66□□□□□ -1.02
CCDC7-216ENST00000640058 CYFIP1Q7L576 1253 aa8.66□□□□□ -1.02
CCDC7-216ENST00000640058 ZNF507Q8TCN5 953 aa8.66□□□□□ -1.02
CCDC7-216ENST00000640058 PRDM10Q9NQV6 1147 aa8.66□□□□□ -1.02
CCDC7-216ENST00000640058 BNIP3Q12983 259 aa8.65□□□□□ -1.02
CCDC7-216ENST00000640058 NETO1Q8TDF5 533 aa8.65□□□□□ -1.02
CCDC7-216ENST00000640058 JARID2Q92833 1246 aaPredicted RBP8.65□□□□□ -1.02
CCDC7-216ENST00000640058 MIR1-1HGQ9H1L0 117 aa8.65□□□□□ -1.02
CCDC7-216ENST00000640058 KCT2Q8NC54 265 aa8.64□□□□□ -1.03
CCDC7-216ENST00000640058 BCL7CQ8WUZ0 217 aaPredicted RBP8.64□□□□□ -1.03
CCDC7-216ENST00000640058 CRELD1Q96HD1 420 aa8.64□□□□□ -1.03
CCDC7-216ENST00000640058 FBXL18Q96ME1 805 aa8.64□□□□□ -1.03
CCDC7-216ENST00000640058 HEXIM2Q96MH2 286 aaKnown RBP8.64□□□□□ -1.03
CCDC7-216ENST00000640058 WNT10AQ9GZT5 417 aa8.64□□□□□ -1.03
CCDC7-216ENST00000640058 PAK6Q9NQU5 681 aaPredicted RBP8.64□□□□□ -1.03
CCDC7-216ENST00000640058 SLC5A6Q9Y289 635 aa8.64□□□□□ -1.03
CCDC7-216ENST00000640058 SNCAIPQ9Y6H5 919 aa8.64□□□□□ -1.03
CCDC7-216ENST00000640058 CEACAM5P06731 702 aa8.63□□□□□ -1.03
CCDC7-216ENST00000640058 ERCC3P19447 782 aa8.63□□□□□ -1.03
CCDC7-216ENST00000640058 GRK4P32298 578 aa8.63□□□□□ -1.03
CCDC7-216ENST00000640058 ST13P50502 369 aaKnown RBP8.63□□□□□ -1.03
CCDC7-216ENST00000640058 OXCT1P55809 520 aa8.63□□□□□ -1.03
CCDC7-216ENST00000640058 NKG7Q16617 165 aa8.63□□□□□ -1.03
CCDC7-216ENST00000640058 USP31Q70CQ4 1352 aa8.62□□□□□ -1.03
CCDC7-216ENST00000640058 LRIG2O94898 1065 aa8.62□□□□□ -1.03
CCDC7-216ENST00000640058 TAL1P17542 331 aaPredicted RBP8.62□□□□□ -1.03
CCDC7-216ENST00000640058 CD96P40200 585 aa8.62□□□□□ -1.03
CCDC7-216ENST00000640058 SPRED2Q7Z698 418 aa8.62□□□□□ -1.03
CCDC7-216ENST00000640058 GIPC2Q8TF65 315 aa8.62□□□□□ -1.03
CCDC7-216ENST00000640058 XAGE3Q8WTP9 111 aa8.62□□□□□ -1.03
CCDC7-216ENST00000640058 MIPEPQ99797 713 aa8.62□□□□□ -1.03
CCDC7-216ENST00000640058 NOC4LQ9BVI4 516 aaKnown RBP8.62□□□□□ -1.03
CCDC7-216ENST00000640058 BCL2L13Q9BXK5 485 aa8.62□□□□□ -1.03
CCDC7-216ENST00000640058 ADGRE2Q9UHX3 823 aa8.62□□□□□ -1.03
CCDC7-216ENST00000640058 PLAGL2Q9UPG8 496 aa8.62□□□□□ -1.03
CCDC7-216ENST00000640058 SLBPQ14493 270 aaKnown RBP eCLIP8.61□□□□□ -1.03
CCDC7-216ENST00000640058 FAM214BQ7L5A3 538 aa8.61□□□□□ -1.03
CCDC7-216ENST00000640058 WFDC3Q8IUB2 231 aa8.61□□□□□ -1.03
CCDC7-216ENST00000640058 KRTAP4-8Q9BYQ9 185 aa8.61□□□□□ -1.03
CCDC7-216ENST00000640058 FOXQ1Q9C009 403 aa8.61□□□□□ -1.03
CCDC7-216ENST00000640058 GTF2IRD1Q9UHL9 959 aa8.61□□□□□ -1.03
CCDC7-216ENST00000640058 COL17A1Q9UMD9 1497 aaPredicted RBP8.6□□□□□ -1.03
CCDC7-216ENST00000640058 RBAK-RBAKDNI3L0D1 243 aa8.6□□□□□ -1.03
CCDC7-216ENST00000640058 GFRA2O00451 464 aa8.6□□□□□ -1.03
CCDC7-216ENST00000640058 SLITRK5O94991 958 aa8.6□□□□□ -1.03
CCDC7-216ENST00000640058 EOMESO95936 686 aa8.6□□□□□ -1.03
CCDC7-216ENST00000640058 IFI16Q16666 785 aaKnown RBP8.6□□□□□ -1.03
CCDC7-216ENST00000640058 STK11IPQ8N1F8 1099 aa8.6□□□□□ -1.03
CCDC7-216ENST00000640058 PHC3Q8NDX5 983 aa8.6□□□□□ -1.03
CCDC7-216ENST00000640058 RLBP1P12271 317 aa8.59□□□□□ -1.03
CCDC7-216ENST00000640058 PLCL1Q15111 1095 aa8.59□□□□□ -1.03
CCDC7-216ENST00000640058 AOC3Q16853 763 aa8.59□□□□□ -1.03
CCDC7-216ENST00000640058 PRAMEF13Q5VWM6 474 aa8.59□□□□□ -1.03
CCDC7-216ENST00000640058 BNC2Q6ZN30 1099 aaPredicted RBP8.59□□□□□ -1.03
CCDC7-216ENST00000640058 HID1Q8IV36 788 aa8.59□□□□□ -1.03
CCDC7-216ENST00000640058 AGBL5Q8NDL9 886 aa8.59□□□□□ -1.03
CCDC7-216ENST00000640058 HRASLS5Q96KN8 279 aa8.59□□□□□ -1.03
CCDC7-216ENST00000640058 DPH2Q9BQC3 489 aaPredicted RBP8.59□□□□□ -1.03
CCDC7-216ENST00000640058 TPX2Q9ULW0 747 aaKnown RBP8.59□□□□□ -1.03
CCDC7-216ENST00000640058 ZBTB7CA1YPR0 619 aa8.58□□□□□ -1.04
CCDC7-216ENST00000640058 PGRP06401 933 aa8.58□□□□□ -1.04
CCDC7-216ENST00000640058 CD8BP10966 210 aa8.58□□□□□ -1.04
CCDC7-216ENST00000640058 RPL6Q02878 288 aaKnown RBP8.58□□□□□ -1.04
CCDC7-216ENST00000640058 TSNAXIP1Q2TAA8 658 aa8.58□□□□□ -1.04
CCDC7-216ENST00000640058 TMCO4Q5TGY1 634 aa8.58□□□□□ -1.04
CCDC7-216ENST00000640058 MISP3Q96FF7 219 aa8.58□□□□□ -1.04
CCDC7-216ENST00000640058 MKNK2Q9HBH9 465 aa8.58□□□□□ -1.04
CCDC7-216ENST00000640058 PRDM5Q9NQX1 630 aaPredicted RBP8.58□□□□□ -1.04
CCDC7-216ENST00000640058 TMEM265A0A087WTH1 108 aa8.57□□□□□ -1.04
CCDC7-216ENST00000640058 GNAT3A8MTJ3 354 aa8.57□□□□□ -1.04
CCDC7-216ENST00000640058 PF4P02776 101 aa8.57□□□□□ -1.04
CCDC7-216ENST00000640058 GBP2P32456 591 aaPredicted RBP8.57□□□□□ -1.04
CCDC7-216ENST00000640058 PRKCQQ04759 706 aa8.57□□□□□ -1.04
CCDC7-216ENST00000640058 FAM160A1Q05DH4 1040 aa8.57□□□□□ -1.04
CCDC7-216ENST00000640058 CAMK2GQ13555 558 aaPredicted RBP8.57□□□□□ -1.04
CCDC7-216ENST00000640058 RIN3Q8TB24 985 aa8.57□□□□□ -1.04
CCDC7-216ENST00000640058 CNTNAP4Q9C0A0 1308 aa8.56□□□□□ -1.04
CCDC7-216ENST00000640058 MINDY4BA8MYZ0 360 aa8.56□□□□□ -1.04
CCDC7-216ENST00000640058 RELL1Q8IUW5 271 aa8.56□□□□□ -1.04
CCDC7-216ENST00000640058 TJP2Q9UDY2 1190 aa8.56□□□□□ -1.04
CCDC7-216ENST00000640058 VAV3Q9UKW4 847 aa8.56□□□□□ -1.04
CCDC7-216ENST00000640058 CORINQ9Y5Q5 1042 aa8.56□□□□□ -1.04
CCDC7-216ENST00000640058 PRR33A8MZF0 331 aa8.55□□□□□ -1.04
CCDC7-216ENST00000640058 IGF2BP3O00425 579 aaKnown RBP eCLIP8.55□□□□□ -1.04
CCDC7-216ENST00000640058 BPNT1O95861 308 aa8.55□□□□□ -1.04
CCDC7-216ENST00000640058 F13A1P00488 732 aa8.55□□□□□ -1.04
CCDC7-216ENST00000640058 CST3P01034 146 aaPredicted RBP8.55□□□□□ -1.04
CCDC7-216ENST00000640058 LMNB2Q03252 620 aa8.55□□□□□ -1.04
CCDC7-216ENST00000640058 NKPD1Q17RQ9 610 aa8.55□□□□□ -1.04
CCDC7-216ENST00000640058 ZNF326Q5BKZ1 582 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms