RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 ZNF341Q9BYN7 854 aa6.87□□□□□ -1.31
HNRNPU-220ENST00000639667 BRCA1P38398 1863 aaKnown RBP6.87□□□□□ -1.31
HNRNPU-220ENST00000639667 IGSF3O75054 1194 aa6.87□□□□□ -1.31
HNRNPU-220ENST00000639667 PLCD1P51178 756 aa6.87□□□□□ -1.31
HNRNPU-220ENST00000639667 CERKLQ49MI3 558 aaPredicted RBP6.87□□□□□ -1.31
HNRNPU-220ENST00000639667 CTR9Q6PD62 1173 aa6.87□□□□□ -1.31
HNRNPU-220ENST00000639667 NFXL1Q6ZNB6 911 aa6.87□□□□□ -1.31
HNRNPU-220ENST00000639667 FOXP4Q8IVH2 680 aaPredicted RBP6.87□□□□□ -1.31
HNRNPU-220ENST00000639667 RNF41Q9H4P4 317 aaPredicted RBP6.87□□□□□ -1.31
HNRNPU-220ENST00000639667 INCENPQ9NQS7 918 aa6.87□□□□□ -1.31
HNRNPU-220ENST00000639667 SCN9AQ15858 1988 aa6.87□□□□□ -1.31
HNRNPU-220ENST00000639667 ERICH2A1L162 156 aa6.87□□□□□ -1.31
HNRNPU-220ENST00000639667 FAM83AQ86UY5 434 aa6.87□□□□□ -1.31
HNRNPU-220ENST00000639667 IDI2Q9BXS1 227 aa6.87□□□□□ -1.31
HNRNPU-220ENST00000639667 IL25Q9H293 177 aa6.87□□□□□ -1.31
HNRNPU-220ENST00000639667 ELP3Q9H9T3 547 aa6.87□□□□□ -1.31
HNRNPU-220ENST00000639667 EPB41L4AQ9HCS5 686 aaPredicted RBP6.87□□□□□ -1.31
HNRNPU-220ENST00000639667 IKQ13123 557 aaPredicted RBP6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 CCDC84Q86UT8 332 aaPredicted RBP6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 DSCC1Q9BVC3 393 aa6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 CDK8P49336 464 aa6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 ZNF157P51786 506 aaPredicted RBP6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 RBM46Q8TBY0 533 aaKnown RBP6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 ZKSCAN4Q969J2 545 aaPredicted RBP6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 JAKMIP1Q96N16 626 aaKnown RBP6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 ZKSCAN3Q9BRR0 538 aa6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 UBAC1Q9BSL1 405 aa6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 STX8Q9UNK0 236 aa6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 B4E1Z4 1266 aa6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 SMIM22K7EJ46 135 aa6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 ECM2O94769 699 aaPredicted RBP6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 INPP5BP32019 993 aa6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 SLC4A3P48751 1232 aa6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 EVX2Q03828 476 aa6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 ABCB5Q2M3G0 1257 aa6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 FKBP1CQ5VVH2 108 aa6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 CREB3L3Q68CJ9 461 aa6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 CHST3Q7LGC8 479 aa6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 MKRN1Q9UHC7 482 aaKnown RBP6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 PPP2R3BQ9Y5P8 575 aa6.86□□□□□ -1.31
HNRNPU-220ENST00000639667 PITPNM2Q9BZ72 1349 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 KDM4AO75164 1064 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 GH2P01242 217 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 MAP3K9P80192 1104 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 TFAP4Q01664 338 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 C12orf60Q5U649 245 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 ZBED3Q96IU2 234 aaPredicted RBP6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 RFX7Q2KHR2 1363 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 AK9Q5TCS8 1911 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 DHX16O60231 1041 aaKnown RBP6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 HTRA3P83110 453 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 SART3Q15020 963 aaKnown RBP6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 SH3BP5LQ7L8J4 393 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 ESR2Q92731 530 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 OTUD5Q96G74 571 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 TCEANC2Q96MN5 208 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 LRRC2Q9BYS8 371 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 CTDP1Q9Y5B0 961 aaPredicted RBP6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 TRIM75PA6NK02 468 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 IFIT3O14879 490 aaKnown RBP6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 SLC27A2O14975 620 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 SEC24BO95487 1268 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 AKNAD1Q5T1N1 836 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 GIMAP6Q6P9H5 292 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 IQCA1Q86XH1 822 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 LSG1Q9H089 658 aaKnown RBP6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 ZHX2Q9Y6X8 837 aa6.85□□□□□ -1.31
HNRNPU-220ENST00000639667 TMEM88BA6NKF7 163 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 SYNE3Q6ZMZ3 975 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 NCOA7Q8NI08 942 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 C22orf23Q9BZE7 217 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 SWAP70Q9UH65 585 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 HERC5Q9UII4 1024 aaKnown RBP6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 PSMA5P28066 241 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 GADL1Q6ZQY3 521 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 ANKRD13AQ8IZ07 590 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 NUP133Q8WUM0 1156 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 UPF3BQ9BZI7 483 aaKnown RBP6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 KRT23Q9C075 422 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 SBF1O95248 1867 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 GOLGB1Q14789 3259 aaKnown RBP6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 AKR1B1P15121 316 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 CASTP20810 708 aaKnown RBP6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 FSTL1Q12841 308 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 SEPT2Q15019 361 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 CCDC96Q2M329 555 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 BLOC1S2Q6QNY1 142 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 TICAM2Q86XR7 235 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 RAB11FIP4Q86YS3 637 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 MAP4K1Q92918 833 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 CLMNQ96JQ2 1002 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 CLIP2Q9UDT6 1046 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 CNTNAP1P78357 1384 aa6.84□□□□□ -1.31
HNRNPU-220ENST00000639667 LTBP1Q14766 1721 aa6.84□□□□□ -1.32
HNRNPU-220ENST00000639667 CYP21A2P08686 494 aa6.83□□□□□ -1.32
HNRNPU-220ENST00000639667 CPA1P15085 419 aa6.83□□□□□ -1.32
HNRNPU-220ENST00000639667 KRT32Q14532 448 aa6.83□□□□□ -1.32
HNRNPU-220ENST00000639667 ALX1Q15699 326 aa6.83□□□□□ -1.32
HNRNPU-220ENST00000639667 CLEC10AQ8IUN9 316 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms