RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 PPP1R42Q7Z4L9 355 aa4.81□□□□□ -1.64
CCDC7-213ENST00000639290 ANKS1AQ92625 1134 aa4.81□□□□□ -1.64
CCDC7-213ENST00000639290 CYSRT1A8MQ03 144 aa4.81□□□□□ -1.64
CCDC7-213ENST00000639290 H0Y858 1186 aa4.81□□□□□ -1.64
CCDC7-213ENST00000639290 MYO1BO43795 1136 aa4.81□□□□□ -1.64
CCDC7-213ENST00000639290 IL9P15248 144 aa4.81□□□□□ -1.64
CCDC7-213ENST00000639290 RAG1P15918 1043 aa4.81□□□□□ -1.64
CCDC7-213ENST00000639290 VGLL4Q14135 290 aa4.81□□□□□ -1.64
CCDC7-213ENST00000639290 FAM110CQ1W6H9 321 aa4.81□□□□□ -1.64
CCDC7-213ENST00000639290 TMEM240Q5SV17 173 aa4.81□□□□□ -1.64
CCDC7-213ENST00000639290 GBF1Q92538 1859 aa4.81□□□□□ -1.64
CCDC7-213ENST00000639290 RUBCNQ92622 972 aa4.81□□□□□ -1.64
CCDC7-213ENST00000639290 PRDM5Q9NQX1 630 aaPredicted RBP4.81□□□□□ -1.64
CCDC7-213ENST00000639290 TLR9Q9NR96 1032 aa4.81□□□□□ -1.64
CCDC7-213ENST00000639290 NUP98P52948 1817 aa4.8□□□□□ -1.64
CCDC7-213ENST00000639290 CCR10P46092 362 aa4.8□□□□□ -1.64
CCDC7-213ENST00000639290 TRIM26Q12899 539 aaPredicted RBP4.8□□□□□ -1.64
CCDC7-213ENST00000639290 STRIP1Q5VSL9 837 aa4.8□□□□□ -1.64
CCDC7-213ENST00000639290 ZNF790Q6PG37 636 aa4.8□□□□□ -1.64
CCDC7-213ENST00000639290 HS6ST3Q8IZP7 471 aa4.8□□□□□ -1.64
CCDC7-213ENST00000639290 GLIS3Q8NEA6 775 aa4.8□□□□□ -1.64
CCDC7-213ENST00000639290 TPRP12270 2363 aaKnown RBP4.8□□□□□ -1.64
CCDC7-213ENST00000639290 PLXNB2O15031 1838 aa4.8□□□□□ -1.64
CCDC7-213ENST00000639290 CXCL11O14625 94 aa4.8□□□□□ -1.64
CCDC7-213ENST00000639290 KDM4AO75164 1064 aa4.8□□□□□ -1.64
CCDC7-213ENST00000639290 NTSR2O95665 410 aa4.8□□□□□ -1.64
CCDC7-213ENST00000639290 VCPP55072 806 aaKnown RBP4.8□□□□□ -1.64
CCDC7-213ENST00000639290 SOWAHCQ53LP3 525 aaPredicted RBP4.8□□□□□ -1.64
CCDC7-213ENST00000639290 MFSD5Q6N075 450 aa4.8□□□□□ -1.64
CCDC7-213ENST00000639290 FASTKD5Q7L8L6 764 aaKnown RBP4.8□□□□□ -1.64
CCDC7-213ENST00000639290 RNF135Q8IUD6 432 aa4.8□□□□□ -1.64
CCDC7-213ENST00000639290 FMNL2Q96PY5 1086 aa4.8□□□□□ -1.64
CCDC7-213ENST00000639290 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.8□□□□□ -1.64
CCDC7-213ENST00000639290 GJD2Q9UKL4 321 aa4.8□□□□□ -1.64
CCDC7-213ENST00000639290 YBX2Q9Y2T7 364 aaKnown RBP4.8□□□□□ -1.64
CCDC7-213ENST00000639290 NCOR2Q9Y618 2525 aa4.8□□□□□ -1.64
CCDC7-213ENST00000639290 TECTAO75443 2155 aa4.8□□□□□ -1.64
CCDC7-213ENST00000639290 KBTBD13C9JR72 458 aa4.79□□□□□ -1.64
CCDC7-213ENST00000639290 TIMP1P01033 207 aa4.79□□□□□ -1.64
CCDC7-213ENST00000639290 KIAA2013Q8IYS2 634 aa4.79□□□□□ -1.64
CCDC7-213ENST00000639290 TBC1D16Q8TBP0 767 aa4.79□□□□□ -1.64
CCDC7-213ENST00000639290 TK2O00142 265 aa4.79□□□□□ -1.64
CCDC7-213ENST00000639290 RIOK3O14730 519 aaKnown RBP4.79□□□□□ -1.64
CCDC7-213ENST00000639290 RNMTO43148 476 aaKnown RBP4.79□□□□□ -1.64
CCDC7-213ENST00000639290 GCLCP48506 637 aaPredicted RBP4.79□□□□□ -1.64
CCDC7-213ENST00000639290 CBX2Q14781 532 aaPredicted RBP4.79□□□□□ -1.64
CCDC7-213ENST00000639290 TRIM60Q495X7 471 aa4.79□□□□□ -1.64
CCDC7-213ENST00000639290 TMEM199Q8N511 208 aa4.79□□□□□ -1.64
CCDC7-213ENST00000639290 TDRD7Q8NHU6 1098 aaKnown RBP4.79□□□□□ -1.64
CCDC7-213ENST00000639290 ASIC4Q96FT7 647 aa4.79□□□□□ -1.64
CCDC7-213ENST00000639290 POLLQ9UGP5 575 aa4.79□□□□□ -1.64
CCDC7-213ENST00000639290 CDV3Q9UKY7 258 aaKnown RBP4.79□□□□□ -1.64
CCDC7-213ENST00000639290 SNCAIPQ9Y6H5 919 aa4.79□□□□□ -1.64
CCDC7-213ENST00000639290 UTYO14607 1347 aa4.79□□□□□ -1.64
CCDC7-213ENST00000639290 ENO4A6NNW6 628 aa4.78□□□□□ -1.64
CCDC7-213ENST00000639290 C6orf229H3BNL8 230 aa4.78□□□□□ -1.64
CCDC7-213ENST00000639290 ZIC2O95409 532 aaPredicted RBP4.78□□□□□ -1.64
CCDC7-213ENST00000639290 ZKSCAN1P17029 563 aaPredicted RBP4.78□□□□□ -1.64
CCDC7-213ENST00000639290 MOGSQ13724 837 aa4.78□□□□□ -1.64
CCDC7-213ENST00000639290 SMAD2Q15796 467 aaKnown RBP4.78□□□□□ -1.64
CCDC7-213ENST00000639290 DACT2Q5SW24 774 aa4.78□□□□□ -1.64
CCDC7-213ENST00000639290 ANKRD33Q7Z3H0 272 aa4.78□□□□□ -1.64
CCDC7-213ENST00000639290 ADAM32Q8TC27 787 aa4.78□□□□□ -1.64
CCDC7-213ENST00000639290 TRIB2Q92519 343 aa4.78□□□□□ -1.64
CCDC7-213ENST00000639290 DDX20Q9UHI6 824 aaKnown RBP4.78□□□□□ -1.64
CCDC7-213ENST00000639290 MUTYHQ9UIF7 546 aa4.78□□□□□ -1.64
CCDC7-213ENST00000639290 ZMIZ1Q9ULJ6 1067 aa4.78□□□□□ -1.64
CCDC7-213ENST00000639290 BOLA1Q9Y3E2 137 aa4.78□□□□□ -1.64
CCDC7-213ENST00000639290 CENPFP49454 3210 aa4.78□□□□□ -1.64
CCDC7-213ENST00000639290 FKBP1AP62942 108 aaKnown RBP4.78□□□□□ -1.64
CCDC7-213ENST00000639290 DOK7Q18PE1 504 aa4.78□□□□□ -1.64
CCDC7-213ENST00000639290 ZC3H14Q6PJT7 736 aaKnown RBP4.78□□□□□ -1.64
CCDC7-213ENST00000639290 KCNQ5Q9NR82 932 aa4.78□□□□□ -1.64
CCDC7-213ENST00000639290 FLNBO75369 2602 aaKnown RBP4.78□□□□□ -1.64
CCDC7-213ENST00000639290 AK9Q5TCS8 1911 aa4.77□□□□□ -1.65
CCDC7-213ENST00000639290 ARHGAP6O43182 974 aa4.77□□□□□ -1.65
CCDC7-213ENST00000639290 NBPF12Q5TAG4 269 aaPredicted RBP4.77□□□□□ -1.65
CCDC7-213ENST00000639290 ZNF34Q8IZ26 560 aa4.77□□□□□ -1.65
CCDC7-213ENST00000639290 PHOSPHO2Q8TCD6 241 aa4.77□□□□□ -1.65
CCDC7-213ENST00000639290 IL23AQ9NPF7 189 aa4.77□□□□□ -1.65
CCDC7-213ENST00000639290 BSDC1Q9NW68 430 aaPredicted RBP4.77□□□□□ -1.65
CCDC7-213ENST00000639290 CTNNA3Q9UI47 895 aa4.77□□□□□ -1.65
CCDC7-213ENST00000639290 PNMA3Q9UL41 463 aa4.77□□□□□ -1.65
CCDC7-213ENST00000639290 MROH7Q68CQ1 1323 aa4.77□□□□□ -1.65
CCDC7-213ENST00000639290 CFAP54Q96N23 3096 aa4.77□□□□□ -1.65
CCDC7-213ENST00000639290 RALGAPA2Q2PPJ7 1873 aa4.77□□□□□ -1.65
CCDC7-213ENST00000639290 PTPRZ1P23471 2315 aaPredicted RBP4.77□□□□□ -1.65
CCDC7-213ENST00000639290 GVINP1Q7Z2Y8 2422 aa4.77□□□□□ -1.65
CCDC7-213ENST00000639290 CAPN8A6NHC0 703 aa4.77□□□□□ -1.65
CCDC7-213ENST00000639290 IRF6O14896 467 aa4.77□□□□□ -1.65
CCDC7-213ENST00000639290 FYB1O15117 783 aa4.77□□□□□ -1.65
CCDC7-213ENST00000639290 SASH1O94885 1247 aa4.77□□□□□ -1.65
CCDC7-213ENST00000639290 C19orf57Q0VDD7 668 aa4.77□□□□□ -1.65
CCDC7-213ENST00000639290 DLGAP5Q15398 846 aa4.77□□□□□ -1.65
CCDC7-213ENST00000639290 NOL9Q5SY16 702 aaKnown RBP4.77□□□□□ -1.65
CCDC7-213ENST00000639290 SLC44A5Q8NCS7 719 aa4.77□□□□□ -1.65
CCDC7-213ENST00000639290 PHF24Q9UPV7 400 aa4.77□□□□□ -1.65
CCDC7-213ENST00000639290 MED23Q9ULK4 1368 aa4.77□□□□□ -1.65
CCDC7-213ENST00000639290 TCERG1O14776 1098 aaKnown RBP4.76□□□□□ -1.65
CCDC7-213ENST00000639290 RIMBP2O15034 1052 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms