RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 FSD1Q9BTV5 496 aa15.12■□□□□ 0.01
CLN6-225ENST00000638144 CRNKL1Q9BZJ0 848 aaKnown RBP15.12■□□□□ 0.01
CLN6-225ENST00000638144 PUS7LQ9H0K6 701 aaKnown RBP15.12■□□□□ 0.01
CLN6-225ENST00000638144 DNAJC18Q9H819 358 aa15.12■□□□□ 0.01
CLN6-225ENST00000638144 PHIPQ8WWQ0 1821 aa15.12■□□□□ 0.01
CLN6-225ENST00000638144 UNCXA6NJT0 531 aa15.11■□□□□ 0.01
CLN6-225ENST00000638144 IRF6O14896 467 aa15.11■□□□□ 0.01
CLN6-225ENST00000638144 CYP2D6P10635 497 aa15.11■□□□□ 0.01
CLN6-225ENST00000638144 SREBF2Q12772 1141 aa15.11■□□□□ 0.01
CLN6-225ENST00000638144 UBE3CQ15386 1083 aa15.11■□□□□ 0.01
CLN6-225ENST00000638144 ERO1BQ86YB8 467 aa15.11■□□□□ 0.01
CLN6-225ENST00000638144 CRACR2BQ8N4Y2 399 aaPredicted RBP15.11■□□□□ 0.01
CLN6-225ENST00000638144 PTPRFP10586 1907 aa15.1■□□□□ 0.01
CLN6-225ENST00000638144 CCL15-CCL14A0A0B4J2E2 113 aa15.1■□□□□ 0.01
CLN6-225ENST00000638144 MANSC4A6NHS7 340 aaPredicted RBP15.1■□□□□ 0.01
CLN6-225ENST00000638144 M0R2C6 588 aa15.1■□□□□ 0.01
CLN6-225ENST00000638144 RNF113AO15541 343 aaKnown RBP15.1■□□□□ 0.01
CLN6-225ENST00000638144 TBC1D8O95759 1140 aa15.1■□□□□ 0.01
CLN6-225ENST00000638144 TM4SF4P48230 202 aa15.1■□□□□ 0.01
CLN6-225ENST00000638144 MAP3K10Q02779 954 aa15.1■□□□□ 0.01
CLN6-225ENST00000638144 PPIL2Q13356 520 aa15.1■□□□□ 0.01
CLN6-225ENST00000638144 CCL15Q16663 113 aa15.1■□□□□ 0.01
CLN6-225ENST00000638144 NOL9Q5SY16 702 aaKnown RBP15.1■□□□□ 0.01
CLN6-225ENST00000638144 TMED8Q6PL24 325 aaPredicted RBP15.1■□□□□ 0.01
CLN6-225ENST00000638144 SCYL3Q8IZE3 742 aa15.1■□□□□ 0.01
CLN6-225ENST00000638144 BRI3BPQ8WY22 251 aa15.1■□□□□ 0.01
CLN6-225ENST00000638144 OSBP2Q969R2 916 aa15.1■□□□□ 0.01
CLN6-225ENST00000638144 MS4A4AQ96JQ5 239 aa15.1■□□□□ 0.01
CLN6-225ENST00000638144 PTPN18Q99952 460 aa15.1■□□□□ 0.01
CLN6-225ENST00000638144 DHX36Q9H2U1 1008 aaKnown RBP15.1■□□□□ 0.01
CLN6-225ENST00000638144 R3HDMLQ9H3Y0 253 aa15.1■□□□□ 0.01
CLN6-225ENST00000638144 PI4KBQ9UBF8 816 aa15.1■□□□□ 0.01
CLN6-225ENST00000638144 STAP2Q9UGK3 403 aa15.1■□□□□ 0.01
CLN6-225ENST00000638144 CYP2D7A0A087X1C5 515 aa15.09■□□□□ 0.01
CLN6-225ENST00000638144 SMIM22K7EJ46 135 aa15.09■□□□□ 0.01
CLN6-225ENST00000638144 CA12O43570 354 aa15.09■□□□□ 0.01
CLN6-225ENST00000638144 GDF11O95390 407 aa15.09■□□□□ 0.01
CLN6-225ENST00000638144 HLA-DOAP06340 250 aa15.09■□□□□ 0.01
CLN6-225ENST00000638144 JAG1P78504 1218 aa15.09■□□□□ 0.01
CLN6-225ENST00000638144 ZSCAN25Q6NSZ9 544 aa15.09■□□□□ 0.01
CLN6-225ENST00000638144 IFNL1Q8IU54 200 aa15.09■□□□□ 0.01
CLN6-225ENST00000638144 CERS3Q8IU89 383 aa15.09■□□□□ 0.01
CLN6-225ENST00000638144 PLEKHM2Q8IWE5 1019 aa15.09■□□□□ 0.01
CLN6-225ENST00000638144 SEC62Q99442 399 aaKnown RBP15.09■□□□□ 0.01
CLN6-225ENST00000638144 TRIM34Q9BYJ4 488 aa15.09■□□□□ 0.01
CLN6-225ENST00000638144 DCP1AQ9NPI6 582 aaPredicted RBP15.09■□□□□ 0.01
CLN6-225ENST00000638144 PICK1Q9NRD5 415 aa15.09■□□□□ 0.01
CLN6-225ENST00000638144 MCM9Q9NXL9 1143 aa15.09■□□□□ 0.01
CLN6-225ENST00000638144 MYH8P13535 1937 aa15.08■□□□□ 0
CLN6-225ENST00000638144 TBC1D12O60347 775 aa15.08■□□□□ 0
CLN6-225ENST00000638144 POLR3DP05423 398 aaPredicted RBP15.08■□□□□ 0
CLN6-225ENST00000638144 PTPRAP18433 802 aa15.08■□□□□ 0
CLN6-225ENST00000638144 PDE4AP27815 886 aa15.08■□□□□ 0
CLN6-225ENST00000638144 PLCD1P51178 756 aa15.08■□□□□ 0
CLN6-225ENST00000638144 GTF2A2P52657 109 aa15.08■□□□□ 0
CLN6-225ENST00000638144 SAGE1Q9NXZ1 904 aa15.08■□□□□ 0
CLN6-225ENST00000638144 HERC5Q9UII4 1024 aaKnown RBP15.08■□□□□ 0
CLN6-225ENST00000638144 SLC4A4Q9Y6R1 1079 aa15.08■□□□□ 0
CLN6-225ENST00000638144 ZHX2Q9Y6X8 837 aa15.08■□□□□ 0
CLN6-225ENST00000638144 CTNND1O60716 968 aaKnown RBP15.07■□□□□ 0
CLN6-225ENST00000638144 PPATQ06203 517 aa15.07■□□□□ 0
CLN6-225ENST00000638144 CCDC129Q6ZRS4 1044 aa15.07■□□□□ 0
CLN6-225ENST00000638144 REM2Q8IYK8 340 aaPredicted RBP15.07■□□□□ 0
CLN6-225ENST00000638144 FAM43AQ8N2R8 423 aa15.07■□□□□ 0
CLN6-225ENST00000638144 APPBP2Q92624 585 aa15.07■□□□□ 0
CLN6-225ENST00000638144 TRIM75PA6NK02 468 aa15.06■□□□□ 0
CLN6-225ENST00000638144 TRIM6-TRIM34B2RNG4 842 aa15.06■□□□□ 0
CLN6-225ENST00000638144 GPAA1O43292 621 aa15.06■□□□□ 0
CLN6-225ENST00000638144 CAP2P40123 477 aa15.06■□□□□ 0
CLN6-225ENST00000638144 SNAPC2Q13487 334 aa15.06■□□□□ 0
CLN6-225ENST00000638144 DGKZQ13574 1117 aa15.06■□□□□ 0
CLN6-225ENST00000638144 SLC44A5Q8NCS7 719 aa15.06■□□□□ 0
CLN6-225ENST00000638144 DYNLL2Q96FJ2 89 aa15.06■□□□□ 0
CLN6-225ENST00000638144 STRBPQ96SI9 672 aaKnown RBP15.06■□□□□ 0
CLN6-225ENST00000638144 PRDM10Q9NQV6 1147 aa15.06■□□□□ 0
CLN6-225ENST00000638144 SERPINB13Q9UIV8 391 aa15.06■□□□□ 0
CLN6-225ENST00000638144 TESPA1A2RU30 521 aaPredicted RBP15.05■□□□□ -0
CLN6-225ENST00000638144 BTBD19C9JJ37 291 aa15.05■□□□□ -0
CLN6-225ENST00000638144 ZFYP08048 801 aaPredicted RBP15.05■□□□□ -0
CLN6-225ENST00000638144 CETPP11597 493 aa15.05■□□□□ -0
CLN6-225ENST00000638144 CRHR2Q13324 411 aa15.05■□□□□ -0
CLN6-225ENST00000638144 TTC6Q86TZ1 520 aa15.05■□□□□ -0
CLN6-225ENST00000638144 METTL16Q86W50 562 aaKnown RBP15.05■□□□□ -0
CLN6-225ENST00000638144 SKAP1Q86WV1 359 aa15.05■□□□□ -0
CLN6-225ENST00000638144 FOXP4Q8IVH2 680 aaPredicted RBP15.05■□□□□ -0
CLN6-225ENST00000638144 RILPL2Q969X0 211 aa15.05■□□□□ -0
CLN6-225ENST00000638144 EVI5LQ96CN4 794 aa15.05■□□□□ -0
CLN6-225ENST00000638144 KCNH4Q9UQ05 1017 aa15.05■□□□□ -0
CLN6-225ENST00000638144 SHMT1P34896 483 aa15.04■□□□□ -0
CLN6-225ENST00000638144 ZMYM1Q5SVZ6 1142 aa15.04■□□□□ -0
CLN6-225ENST00000638144 GADL1Q6ZQY3 521 aa15.04■□□□□ -0
CLN6-225ENST00000638144 STK11IPQ8N1F8 1099 aa15.04■□□□□ -0
CLN6-225ENST00000638144 EHD4Q9H223 541 aa15.04■□□□□ -0
CLN6-225ENST00000638144 EPB41L4AQ9HCS5 686 aaPredicted RBP15.04■□□□□ -0
CLN6-225ENST00000638144 ATP8A2Q9NTI2 1148 aa15.04■□□□□ -0
CLN6-225ENST00000638144 AFG3L2Q9Y4W6 797 aa15.04■□□□□ -0
CLN6-225ENST00000638144 A0A0D9SFI3 127 aa15.03■□□□□ -0
CLN6-225ENST00000638144 GSG1L2A8MUP6 293 aa15.03■□□□□ -0
CLN6-225ENST00000638144 USP17L12C9JPN9 530 aa15.03■□□□□ -0
CLN6-225ENST00000638144 USP17L21D6R901 530 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms