RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 NOA1Q8NC60 698 aaKnown RBP13.6□□□□□ -0.23
CAPN3-221ENST00000638141 AGXT2Q9BYV1 514 aa13.6□□□□□ -0.23
CAPN3-221ENST00000638141 PTPDC1A2A3K4 754 aa13.6□□□□□ -0.23
CAPN3-221ENST00000638141 TAF5LO75529 589 aa13.6□□□□□ -0.23
CAPN3-221ENST00000638141 EZRP15311 586 aaKnown RBP13.6□□□□□ -0.23
CAPN3-221ENST00000638141 ZNF18P17022 549 aa13.6□□□□□ -0.23
CAPN3-221ENST00000638141 GNGT1P63211 74 aa13.6□□□□□ -0.23
CAPN3-221ENST00000638141 ZNF569Q5MCW4 686 aa13.6□□□□□ -0.23
CAPN3-221ENST00000638141 EMC10Q5UCC4 262 aa13.6□□□□□ -0.23
CAPN3-221ENST00000638141 OLFM4Q6UX06 510 aa13.6□□□□□ -0.23
CAPN3-221ENST00000638141 DESI2Q9BSY9 194 aa13.6□□□□□ -0.23
CAPN3-221ENST00000638141 TEX13AQ9BXU3 409 aaPredicted RBP13.6□□□□□ -0.23
CAPN3-221ENST00000638141 IRX2Q9BZI1 471 aaPredicted RBP13.6□□□□□ -0.23
CAPN3-221ENST00000638141 ACTR5Q9H9F9 607 aaPredicted RBP13.6□□□□□ -0.23
CAPN3-221ENST00000638141 FANCLQ9NW38 375 aa13.6□□□□□ -0.23
CAPN3-221ENST00000638141 TTC36A6NLP5 189 aa13.59□□□□□ -0.23
CAPN3-221ENST00000638141 BIN1O00499 593 aa13.59□□□□□ -0.23
CAPN3-221ENST00000638141 STK38Q15208 465 aa13.59□□□□□ -0.23
CAPN3-221ENST00000638141 TAX1BP1Q86VP1 789 aa13.59□□□□□ -0.23
CAPN3-221ENST00000638141 TCEANC2Q96MN5 208 aa13.59□□□□□ -0.23
CAPN3-221ENST00000638141 A0A0D9SFI3 127 aa13.59□□□□□ -0.23
CAPN3-221ENST00000638141 AKR1B15C9JRZ8 316 aaPredicted RBP13.59□□□□□ -0.23
CAPN3-221ENST00000638141 SLC8A1P32418 973 aa13.59□□□□□ -0.23
CAPN3-221ENST00000638141 CLNS1AP54105 237 aaKnown RBP13.59□□□□□ -0.23
CAPN3-221ENST00000638141 SF3A1Q15459 793 aaKnown RBP13.59□□□□□ -0.23
CAPN3-221ENST00000638141 SNCBQ16143 134 aa13.59□□□□□ -0.23
CAPN3-221ENST00000638141 MTHFSDQ2M296 383 aaKnown RBP13.59□□□□□ -0.23
CAPN3-221ENST00000638141 CCDC51Q96ER9 411 aa13.59□□□□□ -0.23
CAPN3-221ENST00000638141 CALR3Q96L12 384 aaKnown RBP13.59□□□□□ -0.23
CAPN3-221ENST00000638141 SLC24A3Q9HC58 644 aa13.59□□□□□ -0.23
CAPN3-221ENST00000638141 HOMER3Q9NSC5 361 aa13.59□□□□□ -0.23
CAPN3-221ENST00000638141 ZRANB1Q9UGI0 708 aa13.59□□□□□ -0.23
CAPN3-221ENST00000638141 MYO6Q9UM54 1294 aa13.59□□□□□ -0.23
CAPN3-221ENST00000638141 MAP3K15Q6ZN16 1313 aa13.59□□□□□ -0.23
CAPN3-221ENST00000638141 NDUFAB1O14561 156 aa13.58□□□□□ -0.24
CAPN3-221ENST00000638141 OPA1O60313 960 aa13.58□□□□□ -0.24
CAPN3-221ENST00000638141 BEND3Q5T5X7 828 aa13.58□□□□□ -0.24
CAPN3-221ENST00000638141 TTC19Q6DKK2 380 aaPredicted RBP13.58□□□□□ -0.24
CAPN3-221ENST00000638141 SLC35F6Q8N357 371 aa13.58□□□□□ -0.24
CAPN3-221ENST00000638141 CCDC26Q8TAB7 109 aa13.58□□□□□ -0.24
CAPN3-221ENST00000638141 FSD1Q9BTV5 496 aa13.58□□□□□ -0.24
CAPN3-221ENST00000638141 MIS18AQ9NYP9 233 aa13.58□□□□□ -0.24
CAPN3-221ENST00000638141 CCDC61Q9Y6R9 512 aa13.58□□□□□ -0.24
CAPN3-221ENST00000638141 ANKARQ7Z5J8 1434 aa13.58□□□□□ -0.24
CAPN3-221ENST00000638141 GOLGA6BA6NDN3 693 aa13.58□□□□□ -0.24
CAPN3-221ENST00000638141 SPTLC2O15270 562 aa13.58□□□□□ -0.24
CAPN3-221ENST00000638141 CLSTN1O94985 981 aa13.58□□□□□ -0.24
CAPN3-221ENST00000638141 NBPF7P0C2Y1 421 aaPredicted RBP13.58□□□□□ -0.24
CAPN3-221ENST00000638141 CDR1P51861 262 aa13.58□□□□□ -0.24
CAPN3-221ENST00000638141 CCNHP51946 323 aaPredicted RBP13.58□□□□□ -0.24
CAPN3-221ENST00000638141 ADKP55263 362 aaKnown RBP13.58□□□□□ -0.24
CAPN3-221ENST00000638141 IFFO1Q0D2I5 559 aa13.58□□□□□ -0.24
CAPN3-221ENST00000638141 PDILTQ8N807 584 aa13.58□□□□□ -0.24
CAPN3-221ENST00000638141 ZNF274Q96GC6 653 aaPredicted RBP13.58□□□□□ -0.24
CAPN3-221ENST00000638141 LZTFL1Q9NQ48 299 aa13.58□□□□□ -0.24
CAPN3-221ENST00000638141 DDX20Q9UHI6 824 aaKnown RBP13.58□□□□□ -0.24
CAPN3-221ENST00000638141 CTDNEP1O95476 244 aa13.57□□□□□ -0.24
CAPN3-221ENST00000638141 PFKFB1P16118 471 aa13.57□□□□□ -0.24
CAPN3-221ENST00000638141 NAP1L1P55209 391 aaKnown RBP13.57□□□□□ -0.24
CAPN3-221ENST00000638141 TRAF1Q13077 416 aa13.57□□□□□ -0.24
CAPN3-221ENST00000638141 NBPF14Q5TI25 921 aa13.57□□□□□ -0.24
CAPN3-221ENST00000638141 RAD9BQ6WBX8 426 aa13.57□□□□□ -0.24
CAPN3-221ENST00000638141 FAM43BQ6ZT52 329 aaPredicted RBP13.57□□□□□ -0.24
CAPN3-221ENST00000638141 FBXL16Q8N461 479 aa13.57□□□□□ -0.24
CAPN3-221ENST00000638141 HPSEQ9Y251 543 aa13.57□□□□□ -0.24
CAPN3-221ENST00000638141 CDCA2Q69YH5 1023 aaPredicted RBP13.57□□□□□ -0.24
CAPN3-221ENST00000638141 KIAA1328Q86T90 577 aa13.57□□□□□ -0.24
CAPN3-221ENST00000638141 AACSQ86V21 672 aa13.57□□□□□ -0.24
CAPN3-221ENST00000638141 TCP11Q8WWU5 503 aa13.57□□□□□ -0.24
CAPN3-221ENST00000638141 HOOK2Q96ED9 719 aa13.57□□□□□ -0.24
CAPN3-221ENST00000638141 SELENOOQ9BVL4 669 aa13.57□□□□□ -0.24
CAPN3-221ENST00000638141 SLC40A1Q9NP59 571 aa13.57□□□□□ -0.24
CAPN3-221ENST00000638141 TOPAZ1Q8N9V7 1692 aa13.56□□□□□ -0.24
CAPN3-221ENST00000638141 GOLGA6L7A0A1B0GV03 622 aa13.56□□□□□ -0.24
CAPN3-221ENST00000638141 NR1I3Q14994 352 aa13.56□□□□□ -0.24
CAPN3-221ENST00000638141 DHX32Q7L7V1 743 aaKnown RBP13.56□□□□□ -0.24
CAPN3-221ENST00000638141 TRAPPC11Q7Z392 1133 aa13.56□□□□□ -0.24
CAPN3-221ENST00000638141 CCDC13Q8IYE1 715 aa13.56□□□□□ -0.24
CAPN3-221ENST00000638141 ANKRD24Q8TF21 1146 aa13.56□□□□□ -0.24
CAPN3-221ENST00000638141 AENQ8WTP8 325 aaKnown RBP13.56□□□□□ -0.24
CAPN3-221ENST00000638141 RIN2Q8WYP3 895 aaPredicted RBP13.56□□□□□ -0.24
CAPN3-221ENST00000638141 DACH1Q9UI36 760 aa13.56□□□□□ -0.24
CAPN3-221ENST00000638141 TAF6LQ9Y6J9 622 aa13.56□□□□□ -0.24
CAPN3-221ENST00000638141 MAP3K19Q56UN5 1328 aa13.56□□□□□ -0.24
CAPN3-221ENST00000638141 CARMIL3Q8ND23 1372 aa13.56□□□□□ -0.24
CAPN3-221ENST00000638141 ANKRD18BA2A2Z9 1011 aa13.56□□□□□ -0.24
CAPN3-221ENST00000638141 SOWAHDA6NJG2 315 aa13.56□□□□□ -0.24
CAPN3-221ENST00000638141 CKAP4Q07065 602 aaKnown RBP13.56□□□□□ -0.24
CAPN3-221ENST00000638141 MTF1Q14872 753 aa13.56□□□□□ -0.24
CAPN3-221ENST00000638141 RBBP5Q15291 538 aaKnown RBP13.56□□□□□ -0.24
CAPN3-221ENST00000638141 CCNI2Q6ZMN8 369 aaPredicted RBP13.56□□□□□ -0.24
CAPN3-221ENST00000638141 PARP9Q8IXQ6 854 aa13.56□□□□□ -0.24
CAPN3-221ENST00000638141 C3orf20Q8ND61 904 aa13.56□□□□□ -0.24
CAPN3-221ENST00000638141 ENOX1Q8TC92 643 aaKnown RBP13.56□□□□□ -0.24
CAPN3-221ENST00000638141 NUDT16Q96DE0 195 aaKnown RBP13.56□□□□□ -0.24
CAPN3-221ENST00000638141 FAM184BQ9ULE4 1060 aa13.56□□□□□ -0.24
CAPN3-221ENST00000638141 IGSF1Q8N6C5 1336 aa13.56□□□□□ -0.24
CAPN3-221ENST00000638141 A0A1B0GTH6 734 aa13.55□□□□□ -0.24
CAPN3-221ENST00000638141 ATF3P18847 181 aa13.55□□□□□ -0.24
CAPN3-221ENST00000638141 HDGFL1Q5TGJ6 251 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms