RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 WASF1Q92558 559 aa11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 ZSCAN10Q96SZ4 725 aaPredicted RBP11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 DCP1AQ9NPI6 582 aaPredicted RBP11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 TACC3Q9Y6A5 838 aa11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 NDUFA8P51970 172 aa11.18□□□□□ -0.62
CACNA1A-248ENST00000637774 GRIK5Q16478 980 aa11.18□□□□□ -0.62
CACNA1A-248ENST00000637774 HSP90AA4PQ58FG1 418 aa11.18□□□□□ -0.62
CACNA1A-248ENST00000637774 CTR9Q6PD62 1173 aa11.18□□□□□ -0.62
CACNA1A-248ENST00000637774 TEX11Q8IYF3 940 aa11.18□□□□□ -0.62
CACNA1A-248ENST00000637774 JMYQ8N9B5 988 aa11.18□□□□□ -0.62
CACNA1A-248ENST00000637774 FAM200AQ8TCP9 573 aa11.18□□□□□ -0.62
CACNA1A-248ENST00000637774 GOLPH3LQ9H4A5 285 aa11.18□□□□□ -0.62
CACNA1A-248ENST00000637774 CLSTN2Q9H4D0 955 aa11.18□□□□□ -0.62
CACNA1A-248ENST00000637774 KAT14Q9H8E8 782 aa11.18□□□□□ -0.62
CACNA1A-248ENST00000637774 ALX1Q15699 326 aa11.18□□□□□ -0.62
CACNA1A-248ENST00000637774 TICAM2Q86XR7 235 aa11.18□□□□□ -0.62
CACNA1A-248ENST00000637774 ZSCAN29Q8IWY8 852 aaPredicted RBP11.18□□□□□ -0.62
CACNA1A-248ENST00000637774 KCNG4Q8TDN1 519 aa11.18□□□□□ -0.62
CACNA1A-248ENST00000637774 SH3RF3Q8TEJ3 882 aaPredicted RBP11.18□□□□□ -0.62
CACNA1A-248ENST00000637774 STAG1Q8WVM7 1258 aa11.18□□□□□ -0.62
CACNA1A-248ENST00000637774 RCOR1Q9UKL0 485 aa11.18□□□□□ -0.62
CACNA1A-248ENST00000637774 LRP6O75581 1613 aa11.18□□□□□ -0.62
CACNA1A-248ENST00000637774 ELP1O95163 1332 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 PLEKHA8P1O95397 391 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 LDHCP07864 332 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 MMP10P09238 476 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 NLRP5P59047 1200 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 FILIP1Q7Z7B0 1213 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 C17orf53Q8N3J3 647 aaPredicted RBP11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 RIOK1Q9BRS2 568 aaKnown RBP11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 LIFRP42702 1097 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 SYKP43405 635 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 RBM10P98175 930 aaKnown RBP11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 BRAPQ7Z569 592 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 ENAHQ8N8S7 591 aaPredicted RBP11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 CBX8Q9HC52 389 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 PNPLA7Q6ZV29 1317 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 USP17L3A6NCW0 530 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 USP17L4A6NCW7 530 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 MPHOSPH10O00566 681 aaKnown RBP11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 BTDP43251 543 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 FAM160A1Q05DH4 1040 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 USP17L1Q7RTZ2 530 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 LINC00301Q8NCQ3 95 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 MXD3Q9BW11 206 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 BRMS1Q9HCU9 246 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 CD209Q9NNX6 404 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 LEMD3Q9Y2U8 911 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 PARP3Q9Y6F1 533 aa11.17□□□□□ -0.62
CACNA1A-248ENST00000637774 UBR2Q8IWV8 1755 aa11.16□□□□□ -0.62
CACNA1A-248ENST00000637774 SHANK3Q9BYB0 1731 aa11.16□□□□□ -0.62
CACNA1A-248ENST00000637774 GOLGA8HP0CJ92 632 aa11.16□□□□□ -0.62
CACNA1A-248ENST00000637774 PPP1R9BQ96SB3 815 aa11.16□□□□□ -0.62
CACNA1A-248ENST00000637774 CPVLQ9H3G5 476 aa11.16□□□□□ -0.62
CACNA1A-248ENST00000637774 R3HCC1Q9Y3T6 440 aaKnown RBP11.16□□□□□ -0.62
CACNA1A-248ENST00000637774 MRVI1Q9Y6F6 885 aa11.16□□□□□ -0.62
CACNA1A-248ENST00000637774 NUP98P52948 1817 aa11.16□□□□□ -0.62
CACNA1A-248ENST00000637774 ILDR1Q86SU0 546 aaPredicted RBP11.16□□□□□ -0.62
CACNA1A-248ENST00000637774 DEXIO95424 95 aa11.16□□□□□ -0.62
CACNA1A-248ENST00000637774 TM4SF1P30408 202 aa11.16□□□□□ -0.62
CACNA1A-248ENST00000637774 DPP8Q6V1X1 898 aaPredicted RBP11.16□□□□□ -0.62
CACNA1A-248ENST00000637774 CNNM3Q8NE01 707 aa11.16□□□□□ -0.62
CACNA1A-248ENST00000637774 OXER1Q8TDS5 423 aa11.16□□□□□ -0.62
CACNA1A-248ENST00000637774 ZNF384Q8TF68 577 aa11.16□□□□□ -0.62
CACNA1A-248ENST00000637774 DBNDD1Q9H9R9 158 aa11.16□□□□□ -0.62
CACNA1A-248ENST00000637774 TJP1Q07157 1748 aa11.15□□□□□ -0.62
CACNA1A-248ENST00000637774 GOLGA6L6A8MZA4 724 aa11.15□□□□□ -0.62
CACNA1A-248ENST00000637774 ZNF202O95125 648 aa11.15□□□□□ -0.62
CACNA1A-248ENST00000637774 SMC2O95347 1197 aa11.15□□□□□ -0.62
CACNA1A-248ENST00000637774 GSTO1P78417 241 aa11.15□□□□□ -0.62
CACNA1A-248ENST00000637774 DDR1Q08345 913 aa11.15□□□□□ -0.62
CACNA1A-248ENST00000637774 ZNF174Q15697 407 aa11.15□□□□□ -0.62
CACNA1A-248ENST00000637774 SGMS1Q86VZ5 419 aa11.15□□□□□ -0.62
CACNA1A-248ENST00000637774 CEP57L1Q8IYX8 460 aa11.15□□□□□ -0.62
CACNA1A-248ENST00000637774 AOPEPQ8N6M6 819 aa11.15□□□□□ -0.62
CACNA1A-248ENST00000637774 RTEL1Q9NZ71 1219 aa11.15□□□□□ -0.62
CACNA1A-248ENST00000637774 SEMA3EO15041 775 aa11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 IFNAR1P17181 557 aa11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 PDE4CQ08493 712 aa11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 TCP10Q12799 353 aa11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 ADALQ6DHV7 355 aa11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 CRACR2BQ8N4Y2 399 aaPredicted RBP11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 ATP8A2Q9NTI2 1148 aa11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 PPEF1O14829 653 aaPredicted RBP11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 PFKFB1P16118 471 aa11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 ATP2B4P23634 1241 aa11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 KIAA0825Q8IV33 1275 aa11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 NOSTRINQ8IVI9 506 aa11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 GPKOWQ92917 476 aaPredicted RBP eCLIP11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 ARID3AQ99856 593 aa11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 FAM217BQ9NTX9 383 aaPredicted RBP11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 ANO10Q9NW15 660 aa11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 TTF2Q9UNY4 1162 aaKnown RBP11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 NUP188Q5SRE5 1749 aa11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 FAM205CA6NFA0 338 aa11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 FMNL1O95466 1100 aaPredicted RBP11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 STX1AQ16623 288 aa11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 UVSSAQ2YD98 709 aa11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 C11orf57Q6ZUT1 292 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms