RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-222	ENST00000637533	ITGA6	P23229	1130 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	AKAP5	P24588	427 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	CDC27	P30260	824 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	INPP5B	P32019	993 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	HTR3A	P46098	478 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	RNF144A	P50876	292 aa	Predicted RBP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	NEK4	P51957	841 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	CACNB3	P54284	484 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	NRL	P54845	237 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	POLE2	P56282	527 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	SESN3	P58005	492 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	SH3BP2	P78314	561 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	LSM11	P83369	360 aa	Known RBP eCLIP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	KCNC4	Q03721	635 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	CBLB	Q13191	982 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	PABPC4	Q13310	644 aa	Known RBP eCLIP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	IFIT5	Q13325	482 aa	Known RBP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	SCARF1	Q14162	830 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	MLC1	Q15049	377 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	PUM3	Q15397	648 aa	Known RBP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	SAFB	Q15424	915 aa	Known RBP eCLIP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	TMEM95	Q3KNT9	176 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	TTC31	Q49AM3	519 aa	Predicted RBP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	BRDT	Q58F21	947 aa	Predicted RBP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	DALRD3	Q5D0E6	543 aa	Known RBP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	VARS2	Q5ST30	1063 aa	Known RBP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	TMEM240	Q5SV17	173 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	THEMIS2	Q5TEJ8	643 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	MEI1	Q5TIA1	1274 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	LRCH2	Q5VUJ6	765 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	EFCAB2	Q5VUJ9	269 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	USPL1	Q5W0Q7	1092 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	IQSEC1	Q6DN90	963 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	KSR2	Q6VAB6	950 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	C4orf50	Q6ZRC1	276 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	BRINP3	Q76B58	766 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	CATIP	Q7Z7H3	387 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	DPP9	Q86TI2	863 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	CCNJL	Q8IV13	435 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	ZZZ3	Q8IYH5	903 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	IFNL2	Q8IZJ0	200 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	MSL3	Q8N5Y2	521 aa	Known RBP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	FAM160A2	Q8N612	972 aa	Predicted RBP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	CCDC89	Q8N998	374 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	TMEM102	Q8N9M5	508 aa	Predicted RBP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	OR13H1	Q8NG92	308 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	CXorf38	Q8TB03	319 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	RNF217	Q8TC41	542 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	ZNF507	Q8TCN5	953 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	EPS8L3	Q8TE67	593 aa	Known RBP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	BTN2A2	Q8WVV5	523 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	TMEM40	Q8WWA1	233 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	KCTD13	Q8WZ19	329 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	BSND	Q8WZ55	320 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	FOXJ1	Q92949	421 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	FERMT2	Q96AC1	680 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	ELMO3	Q96BJ8	720 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	ACSBG1	Q96GR2	724 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	AIFM3	Q96NN9	605 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	NECAB3	Q96P71	396 aa	Predicted RBP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	CDC5L	Q99459	802 aa	Known RBP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	ELAC2	Q9BQ52	826 aa	Known RBP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	OCSTAMP	Q9BR26	566 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	LSM14B	Q9BX40	385 aa	Known RBP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	OSBPL7	Q9BZF2	842 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	SLC13A1	Q9BZW2	595 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	BHLHE41	Q9C0J9	482 aa	Predicted RBP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	ASCC2	Q9H1I8	757 aa	Predicted RBP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	SOX17	Q9H6I2	414 aa	Predicted RBP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	TCF7L1	Q9HCS4	588 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	NMRK2	Q9NPI5	230 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	NLRC4	Q9NPP4	1024 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	PICK1	Q9NRD5	415 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	RASSF1	Q9NS23	344 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	SAP30BP	Q9UHR5	308 aa	Known RBP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	PUF60	Q9UHX1	559 aa	Known RBP	1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	PADI4	Q9UM07	663 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	KCNH4	Q9UQ05	1017 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	LZTS1	Q9Y250	596 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	USP20	Q9Y2K6	914 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	LRCH1	Q9Y2L9	728 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	HCN4	Q9Y3Q4	1203 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	MRVI1	Q9Y6F6	885 aa		1.98	□□□□□ -2.09
MECP2-222	ENST00000637533	TRBV23-1	A0A0A0MS06	115 aa		1.97	□□□□□ -2.09
MECP2-222	ENST00000637533		A0A1W2PP55	124 aa		1.97	□□□□□ -2.09
MECP2-222	ENST00000637533	CCDC189	A1A4V9	331 aa		1.97	□□□□□ -2.09
MECP2-222	ENST00000637533	WNT7A	O00755	349 aa		1.97	□□□□□ -2.09
MECP2-222	ENST00000637533	GPR39	O43194	453 aa		1.97	□□□□□ -2.09
MECP2-222	ENST00000637533	OPA1	O60313	960 aa		1.97	□□□□□ -2.09
MECP2-222	ENST00000637533	MGEA5	O60502	916 aa		1.97	□□□□□ -2.09
MECP2-222	ENST00000637533	CILP	O75339	1184 aa		1.97	□□□□□ -2.09
MECP2-222	ENST00000637533	TCEA3	O75764	348 aa		1.97	□□□□□ -2.09
MECP2-222	ENST00000637533	PF4	P02776	101 aa		1.97	□□□□□ -2.09
MECP2-222	ENST00000637533	FAM157B	P0CG42	384 aa		1.97	□□□□□ -2.09
MECP2-222	ENST00000637533	RARA	P10276	462 aa		1.97	□□□□□ -2.09
MECP2-222	ENST00000637533	RAG1	P15918	1043 aa		1.97	□□□□□ -2.09
MECP2-222	ENST00000637533	ARNT	P27540	789 aa		1.97	□□□□□ -2.09
MECP2-222	ENST00000637533	PLA2G4A	P47712	749 aa		1.97	□□□□□ -2.09
MECP2-222	ENST00000637533	IREB2	P48200	963 aa	Known RBP	1.97	□□□□□ -2.09
MECP2-222	ENST00000637533	PSEN2	P49810	448 aa		1.97	□□□□□ -2.09

Retrieved 100 of 20,778 RNA–protein pairs in 1413 ms