RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 HLA-DOAP06340 250 aa23.07■■□□□ 1.28
CLN6-221ENST00000637494 PRRT2Q7Z6L0 340 aaPredicted RBP23.07■■□□□ 1.28
CLN6-221ENST00000637494 CRACR2BQ8N4Y2 399 aaPredicted RBP23.07■■□□□ 1.28
CLN6-221ENST00000637494 MAGEB6Q8N7X4 407 aa23.07■■□□□ 1.28
CLN6-221ENST00000637494 FAM196BA6NMK8 535 aa23.06■■□□□ 1.28
CLN6-221ENST00000637494 LACTBP83111 547 aaPredicted RBP23.06■■□□□ 1.28
CLN6-221ENST00000637494 ADGRA1Q86SQ6 560 aa23.06■■□□□ 1.28
CLN6-221ENST00000637494 FLT1P17948 1338 aa23.06■■□□□ 1.28
CLN6-221ENST00000637494 TRIM75PA6NK02 468 aa23.05■■□□□ 1.28
CLN6-221ENST00000637494 SLURP2P0DP57 97 aa23.05■■□□□ 1.28
CLN6-221ENST00000637494 USP5P45974 858 aa23.05■■□□□ 1.28
CLN6-221ENST00000637494 C17orf99Q6UX52 265 aa23.05■■□□□ 1.28
CLN6-221ENST00000637494 NBPF11Q86T75 865 aa23.05■■□□□ 1.28
CLN6-221ENST00000637494 FOXP4Q8IVH2 680 aaPredicted RBP23.05■■□□□ 1.28
CLN6-221ENST00000637494 SIRT2Q8IXJ6 389 aa23.05■■□□□ 1.28
CLN6-221ENST00000637494 AS3MTQ9HBK9 375 aa23.05■■□□□ 1.28
CLN6-221ENST00000637494 CPA4Q9UI42 421 aa23.05■■□□□ 1.28
CLN6-221ENST00000637494 CAP2P40123 477 aa23.04■■□□□ 1.28
CLN6-221ENST00000637494 PRMT2P55345 433 aa23.04■■□□□ 1.28
CLN6-221ENST00000637494 MOGSQ13724 837 aa23.04■■□□□ 1.28
CLN6-221ENST00000637494 MIGA1Q8NAN2 632 aa23.04■■□□□ 1.28
CLN6-221ENST00000637494 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.04■■□□□ 1.28
CLN6-221ENST00000637494 SLC45A1Q9Y2W3 748 aa23.04■■□□□ 1.28
CLN6-221ENST00000637494 NDUFB9Q9Y6M9 179 aa23.04■■□□□ 1.28
CLN6-221ENST00000637494 HOXD10P28358 340 aa23.03■■□□□ 1.28
CLN6-221ENST00000637494 DYNLL1P63167 89 aaKnown RBP23.03■■□□□ 1.28
CLN6-221ENST00000637494 C20orf194Q5TEA3 1177 aa23.03■■□□□ 1.28
CLN6-221ENST00000637494 GPAT2Q6NUI2 795 aa23.03■■□□□ 1.28
CLN6-221ENST00000637494 ANTXR1Q9H6X2 564 aa23.03■■□□□ 1.28
CLN6-221ENST00000637494 USP17L5A8MUK1 530 aa23.02■■□□□ 1.28
CLN6-221ENST00000637494 SLC9C1Q4G0N8 1177 aa23.02■■□□□ 1.28
CLN6-221ENST00000637494 ZNF280CQ8ND82 737 aa23.02■■□□□ 1.28
CLN6-221ENST00000637494 DNAJC2Q99543 621 aaKnown RBP23.02■■□□□ 1.28
CLN6-221ENST00000637494 PALD1Q9ULE6 856 aa23.02■■□□□ 1.28
CLN6-221ENST00000637494 MYO5AQ9Y4I1 1855 aaKnown RBP23.02■■□□□ 1.28
CLN6-221ENST00000637494 PABPC4Q13310 644 aaKnown RBP eCLIP23.01■■□□□ 1.27
CLN6-221ENST00000637494 SMCR8Q8TEV9 937 aaPredicted RBP23.01■■□□□ 1.27
CLN6-221ENST00000637494 GINM1Q9NU53 330 aa23.01■■□□□ 1.27
CLN6-221ENST00000637494 SAP30BPQ9UHR5 308 aaKnown RBP23.01■■□□□ 1.27
CLN6-221ENST00000637494 PNMA3Q9UL41 463 aa23.01■■□□□ 1.27
CLN6-221ENST00000637494 PTCH2Q9Y6C5 1203 aa23.01■■□□□ 1.27
CLN6-221ENST00000637494 FMNL1O95466 1100 aaPredicted RBP23■■□□□ 1.27
CLN6-221ENST00000637494 ASNSP08243 561 aa23■■□□□ 1.27
CLN6-221ENST00000637494 CYP2C8P10632 490 aa23■■□□□ 1.27
CLN6-221ENST00000637494 PSMC4P43686 418 aa23■■□□□ 1.27
CLN6-221ENST00000637494 SPP2Q13103 211 aa23■■□□□ 1.27
CLN6-221ENST00000637494 SLC9C2Q5TAH2 1124 aa23■■□□□ 1.27
CLN6-221ENST00000637494 CCDC84Q86UT8 332 aaPredicted RBP23■■□□□ 1.27
CLN6-221ENST00000637494 PROCA1Q8NCQ7 364 aaPredicted RBP23■■□□□ 1.27
CLN6-221ENST00000637494 ARMC5Q96C12 935 aa23■■□□□ 1.27
CLN6-221ENST00000637494 TMEM106CQ9BVX2 250 aa23■■□□□ 1.27
CLN6-221ENST00000637494 LRRCC1Q9C099 1032 aa23■■□□□ 1.27
CLN6-221ENST00000637494 ARHGAP39Q9C0H5 1083 aa23■■□□□ 1.27
CLN6-221ENST00000637494 FRMD4AQ9P2Q2 1039 aaPredicted RBP23■■□□□ 1.27
CLN6-221ENST00000637494 AGTPBP1Q9UPW5 1226 aa23■■□□□ 1.27
CLN6-221ENST00000637494 FOCADQ5VW36 1801 aa22.99■■□□□ 1.27
CLN6-221ENST00000637494 MAGEB6P1A0A0J9YX57 407 aa22.99■■□□□ 1.27
CLN6-221ENST00000637494 GOLIM4O00461 696 aa22.99■■□□□ 1.27
CLN6-221ENST00000637494 ECM2O94769 699 aaPredicted RBP22.99■■□□□ 1.27
CLN6-221ENST00000637494 TTC6Q86TZ1 520 aa22.99■■□□□ 1.27
CLN6-221ENST00000637494 ADGRA2Q96PE1 1338 aa22.99■■□□□ 1.27
CLN6-221ENST00000637494 FCGRTP55899 365 aa22.98■■□□□ 1.27
CLN6-221ENST00000637494 CAP1Q01518 475 aa22.98■■□□□ 1.27
CLN6-221ENST00000637494 ATAD5Q96QE3 1844 aa22.98■■□□□ 1.27
CLN6-221ENST00000637494 PHIPQ8WWQ0 1821 aa22.97■■□□□ 1.27
CLN6-221ENST00000637494 CDK5RAP2Q96SN8 1893 aa22.97■■□□□ 1.27
CLN6-221ENST00000637494 METTL16Q86W50 562 aaKnown RBP22.97■■□□□ 1.27
CLN6-221ENST00000637494 CRNKL1Q9BZJ0 848 aaKnown RBP22.97■■□□□ 1.27
CLN6-221ENST00000637494 PAG1Q9NWQ8 432 aa22.97■■□□□ 1.27
CLN6-221ENST00000637494 BCRP11274 1271 aa22.96■■□□□ 1.27
CLN6-221ENST00000637494 PDE6AP16499 860 aa22.96■■□□□ 1.27
CLN6-221ENST00000637494 ATP5JP18859 108 aa22.96■■□□□ 1.27
CLN6-221ENST00000637494 OSBPP22059 807 aa22.96■■□□□ 1.27
CLN6-221ENST00000637494 HMGCS2P54868 508 aa22.96■■□□□ 1.27
CLN6-221ENST00000637494 SLC4A8Q2Y0W8 1093 aa22.96■■□□□ 1.27
CLN6-221ENST00000637494 RAET1EQ8TD07 263 aa22.96■■□□□ 1.27
CLN6-221ENST00000637494 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.96■■□□□ 1.27
CLN6-221ENST00000637494 TMOD4Q9NZQ9 345 aa22.96■■□□□ 1.27
CLN6-221ENST00000637494 SRRDQ9UH36 339 aa22.96■■□□□ 1.27
CLN6-221ENST00000637494 RRP1BQ14684 758 aaKnown RBP22.95■■□□□ 1.26
CLN6-221ENST00000637494 TRIM47Q96LD4 638 aa22.95■■□□□ 1.26
CLN6-221ENST00000637494 WDR18Q9BV38 432 aa22.95■■□□□ 1.26
CLN6-221ENST00000637494 BOLA2Q9H3K6 86 aa22.95■■□□□ 1.26
CLN6-221ENST00000637494 SERPINB13Q9UIV8 391 aa22.95■■□□□ 1.26
CLN6-221ENST00000637494 PTPRFP10586 1907 aa22.94■■□□□ 1.26
CLN6-221ENST00000637494 MYPNQ86TC9 1320 aa22.94■■□□□ 1.26
CLN6-221ENST00000637494 ZNF532Q9HCE3 1301 aa22.94■■□□□ 1.26
CLN6-221ENST00000637494 GDF11O95390 407 aa22.94■■□□□ 1.26
CLN6-221ENST00000637494 POLR3DP05423 398 aaPredicted RBP22.94■■□□□ 1.26
CLN6-221ENST00000637494 GPATCH3Q96I76 525 aa22.94■■□□□ 1.26
CLN6-221ENST00000637494 ZNF333Q96JL9 665 aa22.94■■□□□ 1.26
CLN6-221ENST00000637494 EHD4Q9H223 541 aa22.94■■□□□ 1.26
CLN6-221ENST00000637494 DNAJC18Q9H819 358 aa22.94■■□□□ 1.26
CLN6-221ENST00000637494 MYH1P12882 1939 aa22.93■■□□□ 1.26
CLN6-221ENST00000637494 C19orf81C9J6K1 198 aa22.93■■□□□ 1.26
CLN6-221ENST00000637494 USP17L10C9JJH3 530 aa22.93■■□□□ 1.26
CLN6-221ENST00000637494 SH3D19Q5HYK7 790 aa22.93■■□□□ 1.26
CLN6-221ENST00000637494 TREML2Q5T2D2 321 aa22.93■■□□□ 1.26
CLN6-221ENST00000637494 RIOK1Q9BRS2 568 aaKnown RBP22.93■■□□□ 1.26
CLN6-221ENST00000637494 ZBTB21Q9ULJ3 1066 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms