RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-225	ENST00000636861	SPC24	Q8NBT2	197 aa		4.63	□□□□□ -1.67
CHD2-225	ENST00000636861	ARMC2	Q8NEN0	867 aa		4.63	□□□□□ -1.67
CHD2-225	ENST00000636861	TDRD7	Q8NHU6	1098 aa	Known RBP	4.63	□□□□□ -1.67
CHD2-225	ENST00000636861	MIPOL1	Q8TD10	442 aa		4.63	□□□□□ -1.67
CHD2-225	ENST00000636861	JARID2	Q92833	1246 aa	Predicted RBP	4.63	□□□□□ -1.67
CHD2-225	ENST00000636861	MKL1	Q969V6	931 aa		4.63	□□□□□ -1.67
CHD2-225	ENST00000636861	MIEF2	Q96C03	454 aa		4.63	□□□□□ -1.67
CHD2-225	ENST00000636861	CABS1	Q96KC9	395 aa		4.63	□□□□□ -1.67
CHD2-225	ENST00000636861	FBXL18	Q96ME1	805 aa		4.63	□□□□□ -1.67
CHD2-225	ENST00000636861	THUMPD2	Q9BTF0	503 aa	Known RBP	4.63	□□□□□ -1.67
CHD2-225	ENST00000636861	UBXN6	Q9BZV1	441 aa		4.63	□□□□□ -1.67
CHD2-225	ENST00000636861	DDX19A	Q9NUU7	478 aa	Known RBP	4.63	□□□□□ -1.67
CHD2-225	ENST00000636861	CHIC2	Q9UKJ5	165 aa		4.63	□□□□□ -1.67
CHD2-225	ENST00000636861	PTPN22	Q9Y2R2	807 aa		4.63	□□□□□ -1.67
CHD2-225	ENST00000636861	ADGRF5	Q8IZF2	1346 aa		4.63	□□□□□ -1.67
CHD2-225	ENST00000636861	COL15A1	P39059	1388 aa		4.63	□□□□□ -1.67
CHD2-225	ENST00000636861	KIF24	Q5T7B8	1368 aa		4.63	□□□□□ -1.67
CHD2-225	ENST00000636861	CARMIL3	Q8ND23	1372 aa		4.63	□□□□□ -1.67
CHD2-225	ENST00000636861	COL5A3	P25940	1745 aa	Predicted RBP	4.63	□□□□□ -1.67
CHD2-225	ENST00000636861	ZNF646	O15015	1829 aa	Predicted RBP	4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	GOLGA6L7	A0A1B0GV03	622 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	ANKRD33B	A6NCL7	494 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	GOLGA6L10	A6NI86	522 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	POLRMT	O00411	1230 aa	Known RBP	4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	EBAG9	O00559	213 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	APAF1	O14727	1248 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	IRF6	O14896	467 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	RGL2	O15211	777 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	ZSCAN12	O43309	604 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	GPR37L1	O60883	481 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	FKTN	O75072	461 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	NEBL	O76041	1014 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	MYC	P01106	439 aa	Predicted RBP	4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	NBPF7	P0C2Y1	421 aa	Predicted RBP	4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	SLC8A1	P32418	973 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	MRPL12	P52815	198 aa	Known RBP	4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	GYS2	P54840	703 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	SLC8A3	P57103	927 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	IFFO1	Q0D2I5	559 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	PLCB4	Q15147	1175 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	ZRSR2	Q15696	482 aa	Known RBP	4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	LRRFIP1	Q32MZ4	808 aa	Known RBP	4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	RCSD1	Q6JBY9	416 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	ATF7IP	Q6VMQ6	1270 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	EP400NL	Q6ZTU2	488 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	B4GALNT4	Q76KP1	1039 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	ERMP1	Q7Z2K6	904 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	HDX	Q7Z353	690 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	BRAP	Q7Z569	592 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	ANKRD23	Q86SG2	305 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	LUZP1	Q86V48	1076 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	ARHGEF25	Q86VW2	580 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	PLA2G4D	Q86XP0	818 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	TDH	Q8IZJ6	230 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	GOLGA1	Q92805	767 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	RUNDC1	Q96C34	613 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	RSRC1	Q96IZ7	334 aa	Known RBP	4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	CFAP53	Q96M91	514 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	PRAM1	Q96QH2	718 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	FUCA2	Q9BTY2	467 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	TMEM106C	Q9BVX2	250 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	NAT10	Q9H0A0	1025 aa	Known RBP	4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	NUP62CL	Q9H1M0	184 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	TAOK3	Q9H2K8	898 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	ORC3	Q9UBD5	711 aa	Predicted RBP	4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	ADAM21	Q9UKJ8	722 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	RTL1	A6NKG5	1358 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	ZNF609	O15014	1411 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	MRC1	P22897	1456 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	NFAT5	O94916	1531 aa		4.62	□□□□□ -1.67
CHD2-225	ENST00000636861	FAM208A	Q9UK61	1670 aa	Known RBP	4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	TJP1	Q07157	1748 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	FRYL	O94915	3013 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	GOLGA6L4	A6NEF3	574 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	ERC2	O15083	957 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	ECM2	O94769	699 aa	Predicted RBP	4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	SNUPN	O95149	360 aa	Known RBP	4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	SKIL	P12757	684 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	INPP5B	P32019	993 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	MAGEA8	P43361	318 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	ZNF157	P51786	506 aa	Predicted RBP	4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	SH3BGR	P55822	239 aa	Predicted RBP	4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	DRP2	Q13474	957 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	DCTN1	Q14203	1278 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	ALDH1L2	Q3SY69	923 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	USP48	Q86UV5	1035 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	LRRC8A	Q8IWT6	810 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	AMOTL1	Q8IY63	956 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	RPUSD2	Q8IZ73	545 aa	Known RBP	4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	CCAR2	Q8N163	923 aa	Known RBP	4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	HNRNPLL	Q8WVV9	542 aa	Known RBP	4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	ANKS1A	Q92625	1134 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	RABGGTA	Q92696	567 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	N4BP2L2	Q92802	583 aa	Predicted RBP	4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	ARHGEF1	Q92888	912 aa	Known RBP	4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	DTNBP1	Q96EV8	351 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	ASB2	Q96Q27	587 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	MPHOSPH8	Q99549	860 aa		4.61	□□□□□ -1.67

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