RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 NKX1-1Q15270 411 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-228ENST00000636610 BICDL1Q6ZP65 573 aa16.1■□□□□ 0.17
CACNA1A-228ENST00000636610 ADGRA1Q86SQ6 560 aa16.1■□□□□ 0.17
CACNA1A-228ENST00000636610 FBXL16Q8N461 479 aa16.1■□□□□ 0.17
CACNA1A-228ENST00000636610 ATRIPQ8WXE1 791 aa16.1■□□□□ 0.17
CACNA1A-228ENST00000636610 RAI14Q9P0K7 980 aa16.1■□□□□ 0.17
CACNA1A-228ENST00000636610 PDE8AO60658 829 aa16.1■□□□□ 0.17
CACNA1A-228ENST00000636610 GYG1P46976 350 aa16.1■□□□□ 0.17
CACNA1A-228ENST00000636610 TRIM28Q13263 835 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-228ENST00000636610 EARS2Q5JPH6 523 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-228ENST00000636610 TOGARAM2Q6ZUX3 1019 aa16.1■□□□□ 0.17
CACNA1A-228ENST00000636610 TRIM22Q8IYM9 498 aa16.1■□□□□ 0.17
CACNA1A-228ENST00000636610 MNS1Q8NEH6 495 aa16.1■□□□□ 0.17
CACNA1A-228ENST00000636610 LPIN2Q92539 896 aa16.1■□□□□ 0.17
CACNA1A-228ENST00000636610 MAN1B1Q9UKM7 699 aa16.1■□□□□ 0.17
CACNA1A-228ENST00000636610 ERICH2A1L162 156 aa16.09■□□□□ 0.17
CACNA1A-228ENST00000636610 GNG11P61952 73 aa16.09■□□□□ 0.17
CACNA1A-228ENST00000636610 TUBE1Q9UJT0 475 aa16.09■□□□□ 0.17
CACNA1A-228ENST00000636610 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.09■□□□□ 0.17
CACNA1A-228ENST00000636610 COL18A1P39060 1754 aa16.09■□□□□ 0.17
CACNA1A-228ENST00000636610 WNT7AO00755 349 aa16.09■□□□□ 0.17
CACNA1A-228ENST00000636610 CYP7A1P22680 504 aa16.09■□□□□ 0.17
CACNA1A-228ENST00000636610 ETF1P62495 437 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-228ENST00000636610 POSTNQ15063 836 aa16.09■□□□□ 0.17
CACNA1A-228ENST00000636610 TMEM87BQ96K49 555 aa16.09■□□□□ 0.17
CACNA1A-228ENST00000636610 WDR24Q96S15 920 aa16.09■□□□□ 0.17
CACNA1A-228ENST00000636610 CSRNP2Q9H175 543 aa16.09■□□□□ 0.17
CACNA1A-228ENST00000636610 GLI3P10071 1580 aa16.09■□□□□ 0.17
CACNA1A-228ENST00000636610 TJP1Q07157 1748 aa16.09■□□□□ 0.17
CACNA1A-228ENST00000636610 SLC5A1P13866 664 aa16.08■□□□□ 0.17
CACNA1A-228ENST00000636610 UBAC1Q9BSL1 405 aa16.08■□□□□ 0.17
CACNA1A-228ENST00000636610 POLR3GO15318 223 aaPredicted RBP16.08■□□□□ 0.16
CACNA1A-228ENST00000636610 PPP6R2O75170 966 aa16.08■□□□□ 0.16
CACNA1A-228ENST00000636610 MMP1P03956 469 aa16.08■□□□□ 0.16
CACNA1A-228ENST00000636610 UBXN4Q92575 508 aa16.08■□□□□ 0.16
CACNA1A-228ENST00000636610 LZTFL1Q9NQ48 299 aa16.08■□□□□ 0.16
CACNA1A-228ENST00000636610 COL5A2P05997 1499 aaPredicted RBP16.08■□□□□ 0.16
CACNA1A-228ENST00000636610 TEX33O43247 280 aa16.08■□□□□ 0.16
CACNA1A-228ENST00000636610 CUTAO60888 179 aa16.08■□□□□ 0.16
CACNA1A-228ENST00000636610 TFRCP02786 760 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-228ENST00000636610 CDC25AP30304 524 aa16.08■□□□□ 0.16
CACNA1A-228ENST00000636610 CLCN6P51797 869 aa16.08■□□□□ 0.16
CACNA1A-228ENST00000636610 DYNLL1P63167 89 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-228ENST00000636610 ZNF174Q15697 407 aa16.08■□□□□ 0.16
CACNA1A-228ENST00000636610 VSTM4Q8IW00 320 aa16.08■□□□□ 0.16
CACNA1A-228ENST00000636610 KRT222Q8N1A0 295 aa16.08■□□□□ 0.16
CACNA1A-228ENST00000636610 SMARCE1Q969G3 411 aa16.08■□□□□ 0.16
CACNA1A-228ENST00000636610 BPIFA3Q9BQP9 254 aa16.08■□□□□ 0.16
CACNA1A-228ENST00000636610 PLA2G12BQ9BX93 195 aa16.08■□□□□ 0.16
CACNA1A-228ENST00000636610 MAPK8IP1Q9UQF2 711 aa16.08■□□□□ 0.16
CACNA1A-228ENST00000636610 ABCC6O95255 1503 aa16.07■□□□□ 0.16
CACNA1A-228ENST00000636610 IKBKBO14920 756 aa16.07■□□□□ 0.16
CACNA1A-228ENST00000636610 V9GY48 417 aaPredicted RBP16.07■□□□□ 0.16
CACNA1A-228ENST00000636610 NMT2O60551 498 aa16.07■□□□□ 0.16
CACNA1A-228ENST00000636610 FMNL1O95466 1100 aaPredicted RBP16.07■□□□□ 0.16
CACNA1A-228ENST00000636610 TEX35Q5T0J7 233 aa16.07■□□□□ 0.16
CACNA1A-228ENST00000636610 MED15Q96RN5 788 aa16.07■□□□□ 0.16
CACNA1A-228ENST00000636610 PPP2R2CQ9Y2T4 447 aa16.07■□□□□ 0.16
CACNA1A-228ENST00000636610 MYH15Q9Y2K3 1946 aa16.06■□□□□ 0.16
CACNA1A-228ENST00000636610 UQCRFS1P1P0C7P4 283 aa16.06■□□□□ 0.16
CACNA1A-228ENST00000636610 ZNF654Q8IZM8 581 aa16.06■□□□□ 0.16
CACNA1A-228ENST00000636610 EEF2KMTQ96G04 330 aa16.06■□□□□ 0.16
CACNA1A-228ENST00000636610 BAG1Q99933 345 aaPredicted RBP16.06■□□□□ 0.16
CACNA1A-228ENST00000636610 GTPBP4Q9BZE4 634 aaKnown RBP16.06■□□□□ 0.16
CACNA1A-228ENST00000636610 BLZF1Q9H2G9 400 aa16.06■□□□□ 0.16
CACNA1A-228ENST00000636610 ZNF335Q9H4Z2 1342 aaPredicted RBP16.06■□□□□ 0.16
CACNA1A-228ENST00000636610 KIF1AQ12756 1690 aa16.06■□□□□ 0.16
CACNA1A-228ENST00000636610 A0A087X0B3 334 aa16.06■□□□□ 0.16
CACNA1A-228ENST00000636610 PLEKHA8P1O95397 391 aa16.06■□□□□ 0.16
CACNA1A-228ENST00000636610 AKAP17AQ02040 695 aaKnown RBP16.06■□□□□ 0.16
CACNA1A-228ENST00000636610 SART3Q15020 963 aaKnown RBP16.06■□□□□ 0.16
CACNA1A-228ENST00000636610 TRIM65Q6PJ69 517 aa16.06■□□□□ 0.16
CACNA1A-228ENST00000636610 REXO1L1PQ8IX06 675 aa16.06■□□□□ 0.16
CACNA1A-228ENST00000636610 FANCBQ8NB91 859 aa16.06■□□□□ 0.16
CACNA1A-228ENST00000636610 SHISA4Q96DD7 197 aa16.06■□□□□ 0.16
CACNA1A-228ENST00000636610 FBXO2Q9UK22 296 aaPredicted RBP16.06■□□□□ 0.16
CACNA1A-228ENST00000636610 SGMS1Q86VZ5 419 aa16.05■□□□□ 0.16
CACNA1A-228ENST00000636610 NACAP1Q9BZK3 213 aa16.05■□□□□ 0.16
CACNA1A-228ENST00000636610 FBXO3Q9UK99 471 aa16.05■□□□□ 0.16
CACNA1A-228ENST00000636610 SOWAHDA6NJG2 315 aa16.05■□□□□ 0.16
CACNA1A-228ENST00000636610 CBFA2T2O43439 604 aa16.05■□□□□ 0.16
CACNA1A-228ENST00000636610 VEGFAP15692 232 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-228ENST00000636610 IFNAR1P17181 557 aa16.05■□□□□ 0.16
CACNA1A-228ENST00000636610 ARID4AP29374 1257 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-228ENST00000636610 CRACR2BQ8N4Y2 399 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-228ENST00000636610 CCDC34Q96HJ3 373 aa16.05■□□□□ 0.16
CACNA1A-228ENST00000636610 TRERF1Q96PN7 1200 aa16.05■□□□□ 0.16
CACNA1A-228ENST00000636610 TEX13AQ9BXU3 409 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-228ENST00000636610 TNKSO95271 1327 aa16.05■□□□□ 0.16
CACNA1A-228ENST00000636610 PSDA5PKW4 1024 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-228ENST00000636610 CCT6AP40227 531 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-228ENST00000636610 SYCP1Q15431 976 aa16.05■□□□□ 0.16
CACNA1A-228ENST00000636610 TIGD1Q96MW7 591 aa16.05■□□□□ 0.16
CACNA1A-228ENST00000636610 NIP7Q9Y221 180 aaKnown RBP eCLIP16.05■□□□□ 0.16
CACNA1A-228ENST00000636610 MORC2Q9Y6X9 1032 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-228ENST00000636610 VWA3AA6NCI4 1184 aa16.04■□□□□ 0.16
CACNA1A-228ENST00000636610 PPARAQ07869 468 aa16.04■□□□□ 0.16
CACNA1A-228ENST00000636610 UTP14CQ5TAP6 766 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-228ENST00000636610 ZCCHC17Q9NP64 241 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-228ENST00000636610 MDM2Q00987 491 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms