RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 HLA-DOAP06340 250 aa21.85■■□□□ 1.09
PNKP-225ENST00000636214 CYP7A1P22680 504 aa21.85■■□□□ 1.09
PNKP-225ENST00000636214 PPP4CP60510 307 aa21.85■■□□□ 1.09
PNKP-225ENST00000636214 MAPKAPK5Q8IW41 473 aa21.85■■□□□ 1.09
PNKP-225ENST00000636214 CLASRPQ8N2M8 674 aaKnown RBP21.85■■□□□ 1.09
PNKP-225ENST00000636214 CRACR2BQ8N4Y2 399 aaPredicted RBP21.85■■□□□ 1.09
PNKP-225ENST00000636214 TGFBRAP1Q8WUH2 860 aa21.85■■□□□ 1.09
PNKP-225ENST00000636214 TBC1D2Q9BYX2 928 aa21.85■■□□□ 1.09
PNKP-225ENST00000636214 ARHGAP39Q9C0H5 1083 aa21.85■■□□□ 1.09
PNKP-225ENST00000636214 PIH1D3Q9NQM4 214 aaKnown RBP21.85■■□□□ 1.09
PNKP-225ENST00000636214 TNRC18O15417 2968 aaPredicted RBP21.85■■□□□ 1.09
PNKP-225ENST00000636214 MYO5AQ9Y4I1 1855 aaKnown RBP21.85■■□□□ 1.09
PNKP-225ENST00000636214 SLURP2P0DP57 97 aa21.84■■□□□ 1.09
PNKP-225ENST00000636214 PSMC4P43686 418 aa21.84■■□□□ 1.09
PNKP-225ENST00000636214 MAP3K12Q12852 859 aa21.84■■□□□ 1.09
PNKP-225ENST00000636214 MOGSQ13724 837 aa21.84■■□□□ 1.09
PNKP-225ENST00000636214 SMCR8Q8TEV9 937 aaPredicted RBP21.84■■□□□ 1.09
PNKP-225ENST00000636214 BCL11AQ9H165 835 aa21.84■■□□□ 1.09
PNKP-225ENST00000636214 IL1RAPL2Q9NP60 686 aa21.84■■□□□ 1.09
PNKP-225ENST00000636214 PTPRFP10586 1907 aa21.83■■□□□ 1.09
PNKP-225ENST00000636214 CAP1Q01518 475 aa21.83■■□□□ 1.09
PNKP-225ENST00000636214 GPAT2Q6NUI2 795 aa21.83■■□□□ 1.09
PNKP-225ENST00000636214 TMED8Q6PL24 325 aaPredicted RBP21.83■■□□□ 1.09
PNKP-225ENST00000636214 RHPN1Q8TCX5 695 aa21.83■■□□□ 1.09
PNKP-225ENST00000636214 KIF1BPQ96EK5 621 aa21.83■■□□□ 1.09
PNKP-225ENST00000636214 AS3MTQ9HBK9 375 aa21.83■■□□□ 1.09
PNKP-225ENST00000636214 PNMA3Q9UL41 463 aa21.83■■□□□ 1.09
PNKP-225ENST00000636214 SLC45A1Q9Y2W3 748 aa21.83■■□□□ 1.09
PNKP-225ENST00000636214 CENPFP49454 3210 aa21.83■■□□□ 1.08
PNKP-225ENST00000636214 ATAD5Q96QE3 1844 aa21.83■■□□□ 1.08
PNKP-225ENST00000636214 FLT1P17948 1338 aa21.82■■□□□ 1.08
PNKP-225ENST00000636214 IFIT2P09913 472 aaKnown RBP21.82■■□□□ 1.08
PNKP-225ENST00000636214 CYP2C8P10632 490 aa21.82■■□□□ 1.08
PNKP-225ENST00000636214 CAP2P40123 477 aa21.82■■□□□ 1.08
PNKP-225ENST00000636214 TTF1Q15361 905 aaPredicted RBP21.82■■□□□ 1.08
PNKP-225ENST00000636214 SLC4A8Q2Y0W8 1093 aa21.82■■□□□ 1.08
PNKP-225ENST00000636214 ADGRA1Q86SQ6 560 aa21.82■■□□□ 1.08
PNKP-225ENST00000636214 MAGEB6Q8N7X4 407 aa21.82■■□□□ 1.08
PNKP-225ENST00000636214 RAET1EQ8TD07 263 aa21.82■■□□□ 1.08
PNKP-225ENST00000636214 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.82■■□□□ 1.08
PNKP-225ENST00000636214 ADGRA2Q96PE1 1338 aa21.81■■□□□ 1.08
PNKP-225ENST00000636214 USP17L5A8MUK1 530 aa21.81■■□□□ 1.08
PNKP-225ENST00000636214 USP5P45974 858 aa21.81■■□□□ 1.08
PNKP-225ENST00000636214 FCGRTP55899 365 aa21.81■■□□□ 1.08
PNKP-225ENST00000636214 CCDC84Q86UT8 332 aaPredicted RBP21.81■■□□□ 1.08
PNKP-225ENST00000636214 ZNF333Q96JL9 665 aa21.81■■□□□ 1.08
PNKP-225ENST00000636214 AGTPBP1Q9UPW5 1226 aa21.81■■□□□ 1.08
PNKP-225ENST00000636214 ZSWIM8A7E2V4 1837 aa21.8■■□□□ 1.08
PNKP-225ENST00000636214 PHIPQ8WWQ0 1821 aa21.8■■□□□ 1.08
PNKP-225ENST00000636214 CDK5RAP2Q96SN8 1893 aa21.8■■□□□ 1.08
PNKP-225ENST00000636214 SPP2Q13103 211 aa21.8■■□□□ 1.08
PNKP-225ENST00000636214 PABPC4Q13310 644 aaKnown RBP eCLIP21.8■■□□□ 1.08
PNKP-225ENST00000636214 MIGA1Q8NAN2 632 aa21.8■■□□□ 1.08
PNKP-225ENST00000636214 PROCA1Q8NCQ7 364 aaPredicted RBP21.8■■□□□ 1.08
PNKP-225ENST00000636214 ZNF280CQ8ND82 737 aa21.8■■□□□ 1.08
PNKP-225ENST00000636214 ZBTB40Q9NUA8 1239 aa21.8■■□□□ 1.08
PNKP-225ENST00000636214 SRRDQ9UH36 339 aa21.8■■□□□ 1.08
PNKP-225ENST00000636214 NDUFB9Q9Y6M9 179 aa21.8■■□□□ 1.08
PNKP-225ENST00000636214 FOCADQ5VW36 1801 aa21.8■■□□□ 1.08
PNKP-225ENST00000636214 POTEFA5A3E0 1075 aa21.79■■□□□ 1.08
PNKP-225ENST00000636214 RAB11FIP3O75154 756 aa21.79■■□□□ 1.08
PNKP-225ENST00000636214 ASNSP08243 561 aa21.79■■□□□ 1.08
PNKP-225ENST00000636214 DYNLL1P63167 89 aaKnown RBP21.79■■□□□ 1.08
PNKP-225ENST00000636214 FOXP4Q8IVH2 680 aaPredicted RBP21.79■■□□□ 1.08
PNKP-225ENST00000636214 SAP30BPQ9UHR5 308 aaKnown RBP21.79■■□□□ 1.08
PNKP-225ENST00000636214 PALD1Q9ULE6 856 aa21.79■■□□□ 1.08
PNKP-225ENST00000636214 RBBP6Q7Z6E9 1792 aaKnown RBP21.79■■□□□ 1.08
PNKP-225ENST00000636214 MYPNQ86TC9 1320 aa21.79■■□□□ 1.08
PNKP-225ENST00000636214 MYCP01106 439 aaPredicted RBP21.78■■□□□ 1.08
PNKP-225ENST00000636214 BCRP11274 1271 aa21.78■■□□□ 1.08
PNKP-225ENST00000636214 OSBPP22059 807 aa21.78■■□□□ 1.08
PNKP-225ENST00000636214 TRIM47Q96LD4 638 aa21.78■■□□□ 1.08
PNKP-225ENST00000636214 MYH1P12882 1939 aa21.77■■□□□ 1.08
PNKP-225ENST00000636214 HMGCS2P54868 508 aa21.77■■□□□ 1.08
PNKP-225ENST00000636214 PRPF38BQ5VTL8 546 aaKnown RBP21.77■■□□□ 1.08
PNKP-225ENST00000636214 SH3TC2Q8TF17 1288 aa21.77■■□□□ 1.08
PNKP-225ENST00000636214 DNAJC2Q99543 621 aaKnown RBP21.77■■□□□ 1.08
PNKP-225ENST00000636214 GINM1Q9NU53 330 aa21.77■■□□□ 1.08
PNKP-225ENST00000636214 TMOD4Q9NZQ9 345 aa21.77■■□□□ 1.08
PNKP-225ENST00000636214 BIN2Q9UBW5 565 aaPredicted RBP21.77■■□□□ 1.08
PNKP-225ENST00000636214 PDE3AQ14432 1141 aa21.76■■□□□ 1.07
PNKP-225ENST00000636214 ANTXR1Q9H6X2 564 aa21.76■■□□□ 1.07
PNKP-225ENST00000636214 MGAMO43451 1857 aa21.75■■□□□ 1.07
PNKP-225ENST00000636214 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.75■■□□□ 1.07
PNKP-225ENST00000636214 SIPA1L1O43166 1804 aa21.74■■□□□ 1.07
PNKP-225ENST00000636214 MAGEB6P1A0A0J9YX57 407 aa21.74■■□□□ 1.07
PNKP-225ENST00000636214 GDF11O95390 407 aa21.74■■□□□ 1.07
PNKP-225ENST00000636214 EN2P19622 333 aaPredicted RBP21.74■■□□□ 1.07
PNKP-225ENST00000636214 CTGFP29279 349 aa21.74■■□□□ 1.07
PNKP-225ENST00000636214 GRK4P32298 578 aa21.74■■□□□ 1.07
PNKP-225ENST00000636214 UBXN2AP68543 259 aa21.74■■□□□ 1.07
PNKP-225ENST00000636214 TREML2Q5T2D2 321 aa21.74■■□□□ 1.07
PNKP-225ENST00000636214 SLC9C2Q5TAH2 1124 aa21.74■■□□□ 1.07
PNKP-225ENST00000636214 TTC6Q86TZ1 520 aa21.74■■□□□ 1.07
PNKP-225ENST00000636214 LOC285556D6RIA3 1793 aa21.74■■□□□ 1.07
PNKP-225ENST00000636214 GOLIM4O00461 696 aa21.73■■□□□ 1.07
PNKP-225ENST00000636214 TNPO2O14787 897 aaKnown RBP21.73■■□□□ 1.07
PNKP-225ENST00000636214 GCLCP48506 637 aaPredicted RBP21.73■■□□□ 1.07
PNKP-225ENST00000636214 IRX3P78415 501 aaPredicted RBP21.73■■□□□ 1.07
PNKP-225ENST00000636214 PRKCZQ05513 592 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms