RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 HERC5Q9UII4 1024 aaKnown RBP11.71□□□□□ -0.53
LINC00339-210ENST00000635675 SNCAIPQ9Y6H5 919 aa11.71□□□□□ -0.53
LINC00339-210ENST00000635675 SIPA1L1O43166 1804 aa11.71□□□□□ -0.54
LINC00339-210ENST00000635675 FAM196BA6NMK8 535 aa11.7□□□□□ -0.54
LINC00339-210ENST00000635675 HLA-DOAP06340 250 aa11.7□□□□□ -0.54
LINC00339-210ENST00000635675 ZBTB48P10074 688 aaPredicted RBP11.7□□□□□ -0.54
LINC00339-210ENST00000635675 GJA5P36382 358 aa11.7□□□□□ -0.54
LINC00339-210ENST00000635675 PLCD1P51178 756 aa11.7□□□□□ -0.54
LINC00339-210ENST00000635675 MAP2K1Q02750 393 aaPredicted RBP11.7□□□□□ -0.54
LINC00339-210ENST00000635675 NOL9Q5SY16 702 aaKnown RBP11.7□□□□□ -0.54
LINC00339-210ENST00000635675 TTC6Q86TZ1 520 aa11.7□□□□□ -0.54
LINC00339-210ENST00000635675 RILPL2Q969X0 211 aa11.7□□□□□ -0.54
LINC00339-210ENST00000635675 SEC62Q99442 399 aaKnown RBP11.7□□□□□ -0.54
LINC00339-210ENST00000635675 DNAJC18Q9H819 358 aa11.7□□□□□ -0.54
LINC00339-210ENST00000635675 ATP8A2Q9NTI2 1148 aa11.7□□□□□ -0.54
LINC00339-210ENST00000635675 WBP1LQ9NX94 342 aa11.7□□□□□ -0.54
LINC00339-210ENST00000635675 MCM9Q9NXL9 1143 aa11.7□□□□□ -0.54
LINC00339-210ENST00000635675 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.7□□□□□ -0.54
LINC00339-210ENST00000635675 SLC4A4Q9Y6R1 1079 aa11.7□□□□□ -0.54
LINC00339-210ENST00000635675 DDX60LQ5H9U9 1706 aaKnown RBP11.7□□□□□ -0.54
LINC00339-210ENST00000635675 SPDYE5A6NIY4 337 aa11.69□□□□□ -0.54
LINC00339-210ENST00000635675 GSG1L2A8MUP6 293 aa11.69□□□□□ -0.54
LINC00339-210ENST00000635675 GPAA1O43292 621 aa11.69□□□□□ -0.54
LINC00339-210ENST00000635675 CTNND1O60716 968 aaKnown RBP11.69□□□□□ -0.54
LINC00339-210ENST00000635675 GSPT1P15170 499 aaKnown RBP11.69□□□□□ -0.54
LINC00339-210ENST00000635675 MKRN3Q13064 507 aaKnown RBP11.69□□□□□ -0.54
LINC00339-210ENST00000635675 RRP1BQ14684 758 aaKnown RBP11.69□□□□□ -0.54
LINC00339-210ENST00000635675 SLC4A8Q2Y0W8 1093 aa11.69□□□□□ -0.54
LINC00339-210ENST00000635675 TTC22Q5TAA0 569 aa11.69□□□□□ -0.54
LINC00339-210ENST00000635675 ERO1BQ86YB8 467 aa11.69□□□□□ -0.54
LINC00339-210ENST00000635675 REM2Q8IYK8 340 aaPredicted RBP11.69□□□□□ -0.54
LINC00339-210ENST00000635675 CNKSR2Q8WXI2 1034 aa11.69□□□□□ -0.54
LINC00339-210ENST00000635675 OPTNQ96CV9 577 aa11.69□□□□□ -0.54
LINC00339-210ENST00000635675 EHD4Q9H223 541 aa11.69□□□□□ -0.54
LINC00339-210ENST00000635675 GNAT2P19087 354 aa11.69□□□□□ -0.54
LINC00339-210ENST00000635675 SDSP20132 328 aa11.69□□□□□ -0.54
LINC00339-210ENST00000635675 CAP2P40123 477 aa11.69□□□□□ -0.54
LINC00339-210ENST00000635675 TM4SF4P48230 202 aa11.69□□□□□ -0.54
LINC00339-210ENST00000635675 GABPAQ06546 454 aa11.69□□□□□ -0.54
LINC00339-210ENST00000635675 GIMAP6Q6P9H5 292 aa11.69□□□□□ -0.54
LINC00339-210ENST00000635675 SCYL3Q8IZE3 742 aa11.69□□□□□ -0.54
LINC00339-210ENST00000635675 CRACR2BQ8N4Y2 399 aaPredicted RBP11.69□□□□□ -0.54
LINC00339-210ENST00000635675 FAM227BQ96M60 508 aa11.69□□□□□ -0.54
LINC00339-210ENST00000635675 HELLSQ9NRZ9 838 aa11.69□□□□□ -0.54
LINC00339-210ENST00000635675 SERPINB13Q9UIV8 391 aa11.69□□□□□ -0.54
LINC00339-210ENST00000635675 PCNTO95613 3336 aa11.68□□□□□ -0.54
LINC00339-210ENST00000635675 NAV1Q8NEY1 1877 aa11.68□□□□□ -0.54
LINC00339-210ENST00000635675 BAZ2AQ9UIF9 1905 aaKnown RBP11.68□□□□□ -0.54
LINC00339-210ENST00000635675 A0A0D9SFI3 127 aa11.68□□□□□ -0.54
LINC00339-210ENST00000635675 PATL2C9JE40 543 aaKnown RBP11.68□□□□□ -0.54
LINC00339-210ENST00000635675 USP17L12C9JPN9 530 aa11.68□□□□□ -0.54
LINC00339-210ENST00000635675 USP17L21D6R901 530 aa11.68□□□□□ -0.54
LINC00339-210ENST00000635675 POLR3DP05423 398 aaPredicted RBP11.68□□□□□ -0.54
LINC00339-210ENST00000635675 CYP2D6P10635 497 aa11.68□□□□□ -0.54
LINC00339-210ENST00000635675 EVX2Q03828 476 aa11.68□□□□□ -0.54
LINC00339-210ENST00000635675 PPATQ06203 517 aa11.68□□□□□ -0.54
LINC00339-210ENST00000635675 C12orf60Q5U649 245 aa11.68□□□□□ -0.54
LINC00339-210ENST00000635675 TATDN1Q6P1N9 297 aa11.68□□□□□ -0.54
LINC00339-210ENST00000635675 CTR9Q6PD62 1173 aa11.68□□□□□ -0.54
LINC00339-210ENST00000635675 OTUD5Q96G74 571 aa11.68□□□□□ -0.54
LINC00339-210ENST00000635675 DDRGK1Q96HY6 314 aa11.68□□□□□ -0.54
LINC00339-210ENST00000635675 PPP4R2Q9NY27 417 aa11.68□□□□□ -0.54
LINC00339-210ENST00000635675 LAMB1P07942 1786 aa11.67□□□□□ -0.54
LINC00339-210ENST00000635675 TESPA1A2RU30 521 aaPredicted RBP11.67□□□□□ -0.54
LINC00339-210ENST00000635675 MANSC4A6NHS7 340 aaPredicted RBP11.67□□□□□ -0.54
LINC00339-210ENST00000635675 IRF6O14896 467 aa11.67□□□□□ -0.54
LINC00339-210ENST00000635675 HSPA1AP0DMV8 641 aaKnown RBP11.67□□□□□ -0.54
LINC00339-210ENST00000635675 HSPA1BP0DMV9 641 aaKnown RBP11.67□□□□□ -0.54
LINC00339-210ENST00000635675 PTPRAP18433 802 aa11.67□□□□□ -0.54
LINC00339-210ENST00000635675 INHBEP58166 350 aa11.67□□□□□ -0.54
LINC00339-210ENST00000635675 JAG1P78504 1218 aa11.67□□□□□ -0.54
LINC00339-210ENST00000635675 NMIQ13287 307 aaPredicted RBP11.67□□□□□ -0.54
LINC00339-210ENST00000635675 PPIL2Q13356 520 aa11.67□□□□□ -0.54
LINC00339-210ENST00000635675 MCMDC2Q4G0Z9 681 aa11.67□□□□□ -0.54
LINC00339-210ENST00000635675 SBK1Q52WX2 424 aa11.67□□□□□ -0.54
LINC00339-210ENST00000635675 CCDC129Q6ZRS4 1044 aa11.67□□□□□ -0.54
LINC00339-210ENST00000635675 SKAP1Q86WV1 359 aa11.67□□□□□ -0.54
LINC00339-210ENST00000635675 MS4A4AQ96JQ5 239 aa11.67□□□□□ -0.54
LINC00339-210ENST00000635675 TRIM34Q9BYJ4 488 aa11.67□□□□□ -0.54
LINC00339-210ENST00000635675 EPB41L4AQ9HCS5 686 aaPredicted RBP11.67□□□□□ -0.54
LINC00339-210ENST00000635675 PICK1Q9NRD5 415 aa11.67□□□□□ -0.54
LINC00339-210ENST00000635675 TAOK2Q9UL54 1235 aa11.67□□□□□ -0.54
LINC00339-210ENST00000635675 CYP2D7A0A087X1C5 515 aa11.66□□□□□ -0.54
LINC00339-210ENST00000635675 SMIM22K7EJ46 135 aa11.66□□□□□ -0.54
LINC00339-210ENST00000635675 FOXP2O15409 715 aa11.66□□□□□ -0.54
LINC00339-210ENST00000635675 SHMT1P34896 483 aa11.66□□□□□ -0.54
LINC00339-210ENST00000635675 SREBF2Q12772 1141 aa11.66□□□□□ -0.54
LINC00339-210ENST00000635675 IFNL3Q8IZI9 196 aa11.66□□□□□ -0.54
LINC00339-210ENST00000635675 ARPP21Q9UBL0 812 aaPredicted RBP11.66□□□□□ -0.54
LINC00339-210ENST00000635675 KCNH4Q9UQ05 1017 aa11.66□□□□□ -0.54
LINC00339-210ENST00000635675 ZHX2Q9Y6X8 837 aa11.66□□□□□ -0.54
LINC00339-210ENST00000635675 DOCK1Q14185 1865 aa11.66□□□□□ -0.54
LINC00339-210ENST00000635675 HIP1O00291 1037 aa11.65□□□□□ -0.54
LINC00339-210ENST00000635675 CXCL11O14625 94 aa11.65□□□□□ -0.54
LINC00339-210ENST00000635675 APPP05067 770 aa11.65□□□□□ -0.54
LINC00339-210ENST00000635675 GTF2A2P52657 109 aa11.65□□□□□ -0.54
LINC00339-210ENST00000635675 SHROOM1Q2M3G4 852 aaPredicted RBP11.65□□□□□ -0.54
LINC00339-210ENST00000635675 VPS53Q5VIR6 699 aa11.65□□□□□ -0.54
LINC00339-210ENST00000635675 AMOTL1Q8IY63 956 aa11.65□□□□□ -0.54
LINC00339-210ENST00000635675 DYNLL2Q96FJ2 89 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms