RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 GSTT1P30711 240 aa4.31□□□□□ -1.72
PSPC1-208ENST00000635562 KRTAP19-4Q3LI73 84 aa4.31□□□□□ -1.72
PSPC1-208ENST00000635562 MEI1Q5TIA1 1274 aa4.31□□□□□ -1.72
PSPC1-208ENST00000635562 ARHGAP27Q6ZUM4 889 aa4.31□□□□□ -1.72
PSPC1-208ENST00000635562 SLC38A3Q99624 504 aa4.31□□□□□ -1.72
PSPC1-208ENST00000635562 CRIM1Q9NZV1 1036 aa4.31□□□□□ -1.72
PSPC1-208ENST00000635562 TMPRSS2O15393 492 aa4.3□□□□□ -1.72
PSPC1-208ENST00000635562 FAM87AP0C7U9 286 aa4.3□□□□□ -1.72
PSPC1-208ENST00000635562 XRCC5P13010 732 aaKnown RBP4.3□□□□□ -1.72
PSPC1-208ENST00000635562 PPP2R3AQ06190 1150 aa4.3□□□□□ -1.72
PSPC1-208ENST00000635562 TAF1CQ15572 869 aaPredicted RBP4.3□□□□□ -1.72
PSPC1-208ENST00000635562 ANGEL2Q5VTE6 544 aaKnown RBP4.3□□□□□ -1.72
PSPC1-208ENST00000635562 KSR1Q8IVT5 923 aa4.3□□□□□ -1.72
PSPC1-208ENST00000635562 SMYD4Q8IYR2 804 aaPredicted RBP4.3□□□□□ -1.72
PSPC1-208ENST00000635562 HRASLS5Q96KN8 279 aa4.3□□□□□ -1.72
PSPC1-208ENST00000635562 RC3H2Q9HBD1 1191 aaKnown RBP4.3□□□□□ -1.72
PSPC1-208ENST00000635562 PPM1HQ9ULR3 514 aa4.3□□□□□ -1.72
PSPC1-208ENST00000635562 DYNC1LI2O43237 492 aaPredicted RBP4.29□□□□□ -1.72
PSPC1-208ENST00000635562 CEACAM5P06731 702 aa4.29□□□□□ -1.72
PSPC1-208ENST00000635562 FCGRTP55899 365 aa4.29□□□□□ -1.72
PSPC1-208ENST00000635562 KIF4BQ2VIQ3 1234 aa4.29□□□□□ -1.72
PSPC1-208ENST00000635562 ERMP1Q7Z2K6 904 aa4.29□□□□□ -1.72
PSPC1-208ENST00000635562 WFDC3Q8IUB2 231 aa4.29□□□□□ -1.72
PSPC1-208ENST00000635562 FAM9AQ8IZU1 332 aaPredicted RBP4.29□□□□□ -1.72
PSPC1-208ENST00000635562 PI4K2BQ8TCG2 481 aa4.29□□□□□ -1.72
PSPC1-208ENST00000635562 FAM168AQ92567 244 aa4.29□□□□□ -1.72
PSPC1-208ENST00000635562 RNF34Q969K3 372 aa4.29□□□□□ -1.72
PSPC1-208ENST00000635562 FANCD2OSQ96PS1 177 aa4.29□□□□□ -1.72
PSPC1-208ENST00000635562 PPP4R2Q9NY27 417 aa4.29□□□□□ -1.72
PSPC1-208ENST00000635562 FAM53CQ9NYF3 392 aa4.29□□□□□ -1.72
PSPC1-208ENST00000635562 PCOLCE2Q9UKZ9 415 aa4.29□□□□□ -1.72
PSPC1-208ENST00000635562 PPP1R9AQ9ULJ8 1098 aa4.29□□□□□ -1.72
PSPC1-208ENST00000635562 SNX11Q9Y5W9 270 aa4.29□□□□□ -1.72
PSPC1-208ENST00000635562 ECEL1O95672 775 aa4.28□□□□□ -1.72
PSPC1-208ENST00000635562 CD8BP10966 210 aa4.28□□□□□ -1.72
PSPC1-208ENST00000635562 ZNF76P36508 570 aa4.28□□□□□ -1.72
PSPC1-208ENST00000635562 FAAP100Q0VG06 881 aa4.28□□□□□ -1.72
PSPC1-208ENST00000635562 SLC23A3Q6PIS1 610 aa4.28□□□□□ -1.72
PSPC1-208ENST00000635562 ZNF574Q6ZN55 896 aaPredicted RBP4.28□□□□□ -1.72
PSPC1-208ENST00000635562 SPRED2Q7Z698 418 aa4.28□□□□□ -1.72
PSPC1-208ENST00000635562 PLD6Q8N2A8 252 aaKnown RBP4.28□□□□□ -1.72
PSPC1-208ENST00000635562 FLAD1Q8NFF5 587 aa4.28□□□□□ -1.72
PSPC1-208ENST00000635562 C8orf37Q96NL8 207 aa4.28□□□□□ -1.72
PSPC1-208ENST00000635562 POLR3GLQ9BT43 218 aa4.28□□□□□ -1.72
PSPC1-208ENST00000635562 NOC4LQ9BVI4 516 aaKnown RBP4.28□□□□□ -1.72
PSPC1-208ENST00000635562 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.28□□□□□ -1.72
PSPC1-208ENST00000635562 RNASE1P07998 156 aaKnown RBP4.27□□□□□ -1.73
PSPC1-208ENST00000635562 GSTP1P09211 210 aaKnown RBP4.27□□□□□ -1.73
PSPC1-208ENST00000635562 CDK5R2Q13319 367 aa4.27□□□□□ -1.73
PSPC1-208ENST00000635562 AOC3Q16853 763 aa4.27□□□□□ -1.73
PSPC1-208ENST00000635562 ZNF648Q5T619 568 aaPredicted RBP4.27□□□□□ -1.73
PSPC1-208ENST00000635562 C9orf131Q5VYM1 1079 aa4.27□□□□□ -1.73
PSPC1-208ENST00000635562 DTHD1Q6ZMT9 781 aa4.27□□□□□ -1.73
PSPC1-208ENST00000635562 NT5DC4Q86YG4 428 aa4.27□□□□□ -1.73
PSPC1-208ENST00000635562 ASB11Q8WXH4 323 aa4.27□□□□□ -1.73
PSPC1-208ENST00000635562 NECAB3Q96P71 396 aaPredicted RBP4.27□□□□□ -1.73
PSPC1-208ENST00000635562 RSRP1Q9BUV0 290 aa4.27□□□□□ -1.73
PSPC1-208ENST00000635562 DUSP23Q9BVJ7 150 aa4.27□□□□□ -1.73
PSPC1-208ENST00000635562 EMILIN2Q9BXX0 1053 aa4.27□□□□□ -1.73
PSPC1-208ENST00000635562 TGIF2Q9GZN2 237 aa4.27□□□□□ -1.73
PSPC1-208ENST00000635562 CCDC86Q9H6F5 360 aaKnown RBP4.27□□□□□ -1.73
PSPC1-208ENST00000635562 MBNL3Q9NUK0 354 aaKnown RBP4.27□□□□□ -1.73
PSPC1-208ENST00000635562 TMEM39AQ9NV64 488 aa4.27□□□□□ -1.73
PSPC1-208ENST00000635562 BCCIPQ9P287 314 aaKnown RBP eCLIP4.27□□□□□ -1.73
PSPC1-208ENST00000635562 GTF2IRD1Q9UHL9 959 aa4.27□□□□□ -1.73
PSPC1-208ENST00000635562 CARMIL2Q6F5E8 1435 aa4.27□□□□□ -1.73
PSPC1-208ENST00000635562 ENC1O14682 589 aa4.26□□□□□ -1.73
PSPC1-208ENST00000635562 ERCC5P28715 1186 aaPredicted RBP4.26□□□□□ -1.73
PSPC1-208ENST00000635562 RACK1P63244 317 aaKnown RBP4.26□□□□□ -1.73
PSPC1-208ENST00000635562 FBLN7Q53RD9 439 aa4.26□□□□□ -1.73
PSPC1-208ENST00000635562 SV2BQ7L1I2 683 aa4.26□□□□□ -1.73
PSPC1-208ENST00000635562 FAM177A1Q8N128 213 aaPredicted RBP4.26□□□□□ -1.73
PSPC1-208ENST00000635562 FAM84AQ96KN4 292 aa4.26□□□□□ -1.73
PSPC1-208ENST00000635562 PPP1R16BQ96T49 567 aa4.26□□□□□ -1.73
PSPC1-208ENST00000635562 TNKS2Q9H2K2 1166 aa4.26□□□□□ -1.73
PSPC1-208ENST00000635562 LGR6Q9HBX8 967 aa4.26□□□□□ -1.73
PSPC1-208ENST00000635562 DISC1Q9NRI5 854 aa4.26□□□□□ -1.73
PSPC1-208ENST00000635562 DDX41Q9UJV9 622 aaKnown RBP4.26□□□□□ -1.73
PSPC1-208ENST00000635562 TTF2Q9UNY4 1162 aaKnown RBP4.26□□□□□ -1.73
PSPC1-208ENST00000635562 PCDHGC5Q9Y5F6 944 aa4.26□□□□□ -1.73
PSPC1-208ENST00000635562 IGF2BP3O00425 579 aaKnown RBP eCLIP4.25□□□□□ -1.73
PSPC1-208ENST00000635562 ZNF862O60290 1169 aa4.25□□□□□ -1.73
PSPC1-208ENST00000635562 RNGTTO60942 597 aaKnown RBP4.25□□□□□ -1.73
PSPC1-208ENST00000635562 CELA3AP09093 270 aa4.25□□□□□ -1.73
PSPC1-208ENST00000635562 LIG1P18858 919 aa4.25□□□□□ -1.73
PSPC1-208ENST00000635562 OXCT1P55809 520 aa4.25□□□□□ -1.73
PSPC1-208ENST00000635562 ZC3H6P61129 1189 aaKnown RBP4.25□□□□□ -1.73
PSPC1-208ENST00000635562 ERVK-24P63145 666 aa4.25□□□□□ -1.73
PSPC1-208ENST00000635562 BNIP3Q12983 259 aa4.25□□□□□ -1.73
PSPC1-208ENST00000635562 TTLL4Q14679 1199 aa4.25□□□□□ -1.73
PSPC1-208ENST00000635562 HS2ST1Q7LGA3 356 aa4.25□□□□□ -1.73
PSPC1-208ENST00000635562 ZSWIM9Q86XI8 627 aa4.25□□□□□ -1.73
PSPC1-208ENST00000635562 FAM181AQ8N9Y4 354 aa4.25□□□□□ -1.73
PSPC1-208ENST00000635562 RNF214Q8ND24 703 aa4.25□□□□□ -1.73
PSPC1-208ENST00000635562 LRRN4CLQ8ND94 238 aa4.25□□□□□ -1.73
PSPC1-208ENST00000635562 RHOVQ96L33 236 aa4.25□□□□□ -1.73
PSPC1-208ENST00000635562 TINF2Q9BSI4 451 aa4.25□□□□□ -1.73
PSPC1-208ENST00000635562 SSU72Q9NP77 194 aaKnown RBP4.25□□□□□ -1.73
PSPC1-208ENST00000635562 KCNQ5Q9NR82 932 aa4.25□□□□□ -1.73
PSPC1-208ENST00000635562 GPN3Q9UHW5 284 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms