RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 SDR42E1Q8WUS8 393 aa17.73■□□□□ 0.43
CDC42BPB-209ENST00000634889 ZKSCAN4Q969J2 545 aaPredicted RBP17.73■□□□□ 0.43
CDC42BPB-209ENST00000634889 DDRGK1Q96HY6 314 aa17.73■□□□□ 0.43
CDC42BPB-209ENST00000634889 WNK4Q96J92 1243 aa17.73■□□□□ 0.43
CDC42BPB-209ENST00000634889 STRBPQ96SI9 672 aaKnown RBP17.73■□□□□ 0.43
CDC42BPB-209ENST00000634889 EHD4Q9H223 541 aa17.73■□□□□ 0.43
CDC42BPB-209ENST00000634889 ELP3Q9H9T3 547 aa17.73■□□□□ 0.43
CDC42BPB-209ENST00000634889 TAOK2Q9UL54 1235 aa17.73■□□□□ 0.43
CDC42BPB-209ENST00000634889 SNCAIPQ9Y6H5 919 aa17.73■□□□□ 0.43
CDC42BPB-209ENST00000634889 DOCK1Q14185 1865 aa17.73■□□□□ 0.43
CDC42BPB-209ENST00000634889 SPDYE5A6NIY4 337 aa17.72■□□□□ 0.43
CDC42BPB-209ENST00000634889 CTNND1O60716 968 aaKnown RBP17.72■□□□□ 0.43
CDC42BPB-209ENST00000634889 TTC22Q5TAA0 569 aa17.72■□□□□ 0.43
CDC42BPB-209ENST00000634889 RILPL2Q969X0 211 aa17.72■□□□□ 0.43
CDC42BPB-209ENST00000634889 TRIM34Q9BYJ4 488 aa17.72■□□□□ 0.43
CDC42BPB-209ENST00000634889 MCM9Q9NXL9 1143 aa17.72■□□□□ 0.43
CDC42BPB-209ENST00000634889 SLC4A4Q9Y6R1 1079 aa17.72■□□□□ 0.43
CDC42BPB-209ENST00000634889 M0R2C6 588 aa17.71■□□□□ 0.43
CDC42BPB-209ENST00000634889 GPAA1O43292 621 aa17.71■□□□□ 0.43
CDC42BPB-209ENST00000634889 PRKAB2O43741 272 aa17.71■□□□□ 0.43
CDC42BPB-209ENST00000634889 KIF23Q02241 960 aaPredicted RBP17.71■□□□□ 0.43
CDC42BPB-209ENST00000634889 GIMAP6Q6P9H5 292 aa17.71■□□□□ 0.43
CDC42BPB-209ENST00000634889 ERO1BQ86YB8 467 aa17.71■□□□□ 0.43
CDC42BPB-209ENST00000634889 SCYL3Q8IZE3 742 aa17.71■□□□□ 0.43
CDC42BPB-209ENST00000634889 CRACR2BQ8N4Y2 399 aaPredicted RBP17.71■□□□□ 0.43
CDC42BPB-209ENST00000634889 OPTNQ96CV9 577 aa17.71■□□□□ 0.43
CDC42BPB-209ENST00000634889 HELLSQ9NRZ9 838 aa17.71■□□□□ 0.43
CDC42BPB-209ENST00000634889 SERPINB13Q9UIV8 391 aa17.71■□□□□ 0.43
CDC42BPB-209ENST00000634889 MANSC4A6NHS7 340 aaPredicted RBP17.7■□□□□ 0.42
CDC42BPB-209ENST00000634889 POLR3DP05423 398 aaPredicted RBP17.7■□□□□ 0.42
CDC42BPB-209ENST00000634889 SREBF2Q12772 1141 aa17.7■□□□□ 0.42
CDC42BPB-209ENST00000634889 AMOTL1Q8IY63 956 aa17.7■□□□□ 0.42
CDC42BPB-209ENST00000634889 ZIC5Q96T25 663 aa17.7■□□□□ 0.42
CDC42BPB-209ENST00000634889 WBP1LQ9NX94 342 aa17.7■□□□□ 0.42
CDC42BPB-209ENST00000634889 BAZ2AQ9UIF9 1905 aaKnown RBP17.7■□□□□ 0.42
CDC42BPB-209ENST00000634889 ATAD5Q96QE3 1844 aa17.7■□□□□ 0.42
CDC42BPB-209ENST00000634889 FAM196BA6NMK8 535 aa17.69■□□□□ 0.42
CDC42BPB-209ENST00000634889 HIP1O00291 1037 aa17.69■□□□□ 0.42
CDC42BPB-209ENST00000634889 GSPT1P15170 499 aaKnown RBP17.69■□□□□ 0.42
CDC42BPB-209ENST00000634889 GJA5P36382 358 aa17.69■□□□□ 0.42
CDC42BPB-209ENST00000634889 INHBEP58166 350 aa17.69■□□□□ 0.42
CDC42BPB-209ENST00000634889 PPATQ06203 517 aa17.69■□□□□ 0.42
CDC42BPB-209ENST00000634889 OTUD5Q96G74 571 aa17.69■□□□□ 0.42
CDC42BPB-209ENST00000634889 SEC62Q99442 399 aaKnown RBP17.69■□□□□ 0.42
CDC42BPB-209ENST00000634889 BEGAINQ9BUH8 593 aa17.69■□□□□ 0.42
CDC42BPB-209ENST00000634889 DNAJC18Q9H819 358 aa17.69■□□□□ 0.42
CDC42BPB-209ENST00000634889 PICK1Q9NRD5 415 aa17.69■□□□□ 0.42
CDC42BPB-209ENST00000634889 ARPP21Q9UBL0 812 aaPredicted RBP17.69■□□□□ 0.42
CDC42BPB-209ENST00000634889 GSG1L2A8MUP6 293 aa17.68■□□□□ 0.42
CDC42BPB-209ENST00000634889 CA12O43570 354 aa17.68■□□□□ 0.42
CDC42BPB-209ENST00000634889 SLURP2P0DP57 97 aa17.68■□□□□ 0.42
CDC42BPB-209ENST00000634889 SDSP20132 328 aa17.68■□□□□ 0.42
CDC42BPB-209ENST00000634889 CAP2P40123 477 aa17.68■□□□□ 0.42
CDC42BPB-209ENST00000634889 TM4SF4P48230 202 aa17.68■□□□□ 0.42
CDC42BPB-209ENST00000634889 PLCD1P51178 756 aa17.68■□□□□ 0.42
CDC42BPB-209ENST00000634889 MKRN3Q13064 507 aaKnown RBP17.68■□□□□ 0.42
CDC42BPB-209ENST00000634889 PPIL2Q13356 520 aa17.68■□□□□ 0.42
CDC42BPB-209ENST00000634889 SLC4A8Q2Y0W8 1093 aa17.68■□□□□ 0.42
CDC42BPB-209ENST00000634889 PPP4R2Q9NY27 417 aa17.68■□□□□ 0.42
CDC42BPB-209ENST00000634889 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.68■□□□□ 0.42
CDC42BPB-209ENST00000634889 PATL2C9JE40 543 aaKnown RBP17.67■□□□□ 0.42
CDC42BPB-209ENST00000634889 HSPA1AP0DMV8 641 aaKnown RBP17.67■□□□□ 0.42
CDC42BPB-209ENST00000634889 HSPA1BP0DMV9 641 aaKnown RBP17.67■□□□□ 0.42
CDC42BPB-209ENST00000634889 PTPRAP18433 802 aa17.67■□□□□ 0.42
CDC42BPB-209ENST00000634889 GTF2A2P52657 109 aa17.67■□□□□ 0.42
CDC42BPB-209ENST00000634889 GABPAQ06546 454 aa17.67■□□□□ 0.42
CDC42BPB-209ENST00000634889 MCMDC2Q4G0Z9 681 aa17.67■□□□□ 0.42
CDC42BPB-209ENST00000634889 TATDN1Q6P1N9 297 aa17.67■□□□□ 0.42
CDC42BPB-209ENST00000634889 CNKSR2Q8WXI2 1034 aa17.67■□□□□ 0.42
CDC42BPB-209ENST00000634889 NACAP1Q9BZK3 213 aa17.67■□□□□ 0.42
CDC42BPB-209ENST00000634889 GINM1Q9NU53 330 aa17.67■□□□□ 0.42
CDC42BPB-209ENST00000634889 A0A0D9SFI3 127 aa17.66■□□□□ 0.42
CDC42BPB-209ENST00000634889 USP17L12C9JPN9 530 aa17.66■□□□□ 0.42
CDC42BPB-209ENST00000634889 USP17L21D6R901 530 aa17.66■□□□□ 0.42
CDC42BPB-209ENST00000634889 IRF6O14896 467 aa17.66■□□□□ 0.42
CDC42BPB-209ENST00000634889 SBK1Q52WX2 424 aa17.66■□□□□ 0.42
CDC42BPB-209ENST00000634889 C12orf60Q5U649 245 aa17.66■□□□□ 0.42
CDC42BPB-209ENST00000634889 CTR9Q6PD62 1173 aa17.66■□□□□ 0.42
CDC42BPB-209ENST00000634889 MS4A4AQ96JQ5 239 aa17.66■□□□□ 0.42
CDC42BPB-209ENST00000634889 FAM227BQ96M60 508 aa17.66■□□□□ 0.42
CDC42BPB-209ENST00000634889 TBC1D2Q9BYX2 928 aa17.66■□□□□ 0.42
CDC42BPB-209ENST00000634889 DIAPH3Q9NSV4 1193 aa17.66■□□□□ 0.42
CDC42BPB-209ENST00000634889 SAGE1Q9NXZ1 904 aa17.66■□□□□ 0.42
CDC42BPB-209ENST00000634889 SWAP70Q9UH65 585 aa17.66■□□□□ 0.42
CDC42BPB-209ENST00000634889 PHIPQ8WWQ0 1821 aa17.65■□□□□ 0.42
CDC42BPB-209ENST00000634889 TESPA1A2RU30 521 aaPredicted RBP17.65■□□□□ 0.42
CDC42BPB-209ENST00000634889 APPP05067 770 aa17.65■□□□□ 0.42
CDC42BPB-209ENST00000634889 ASNSP08243 561 aa17.65■□□□□ 0.42
CDC42BPB-209ENST00000634889 MFAP1P55081 439 aaKnown RBP17.65■□□□□ 0.42
CDC42BPB-209ENST00000634889 NMIQ13287 307 aaPredicted RBP17.65■□□□□ 0.42
CDC42BPB-209ENST00000634889 SNAPC2Q13487 334 aa17.65■□□□□ 0.42
CDC42BPB-209ENST00000634889 EPB41L4AQ9HCS5 686 aaPredicted RBP17.65■□□□□ 0.42
CDC42BPB-209ENST00000634889 KCNH4Q9UQ05 1017 aa17.65■□□□□ 0.42
CDC42BPB-209ENST00000634889 CYP2D6P10635 497 aa17.64■□□□□ 0.41
CDC42BPB-209ENST00000634889 CETPP11597 493 aa17.64■□□□□ 0.41
CDC42BPB-209ENST00000634889 SHMT1P34896 483 aa17.64■□□□□ 0.41
CDC42BPB-209ENST00000634889 TDO2P48775 406 aa17.64■□□□□ 0.41
CDC42BPB-209ENST00000634889 RRP1BQ14684 758 aaKnown RBP17.64■□□□□ 0.41
CDC42BPB-209ENST00000634889 CCDC129Q6ZRS4 1044 aa17.64■□□□□ 0.41
CDC42BPB-209ENST00000634889 IFNL3Q8IZI9 196 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms