RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 TESPA1A2RU30 521 aaPredicted RBP13.47□□□□□ -0.25
DDX41-219ENST00000629036 FAM196BA6NMK8 535 aa13.47□□□□□ -0.25
DDX41-219ENST00000629036 TBC1D12O60347 775 aa13.47□□□□□ -0.25
DDX41-219ENST00000629036 BAG3O95817 575 aa13.47□□□□□ -0.25
DDX41-219ENST00000629036 NUCB1Q02818 461 aa13.47□□□□□ -0.25
DDX41-219ENST00000629036 EVX2Q03828 476 aa13.47□□□□□ -0.25
DDX41-219ENST00000629036 MKRN3Q13064 507 aaKnown RBP13.47□□□□□ -0.25
DDX41-219ENST00000629036 ANKRD45Q5TZF3 282 aa13.47□□□□□ -0.25
DDX41-219ENST00000629036 MAPKAPK5Q8IW41 473 aa13.47□□□□□ -0.25
DDX41-219ENST00000629036 OPTNQ96CV9 577 aa13.47□□□□□ -0.25
DDX41-219ENST00000629036 HOOK2Q96ED9 719 aa13.47□□□□□ -0.25
DDX41-219ENST00000629036 PTPN18Q99952 460 aa13.47□□□□□ -0.25
DDX41-219ENST00000629036 LAMA4Q16363 1823 aa13.47□□□□□ -0.25
DDX41-219ENST00000629036 PARP14Q460N5 1801 aa13.47□□□□□ -0.25
DDX41-219ENST00000629036 IGF2BP3O00425 579 aaKnown RBP eCLIP13.46□□□□□ -0.25
DDX41-219ENST00000629036 TBC1D8O95759 1140 aa13.46□□□□□ -0.25
DDX41-219ENST00000629036 PDE1AP54750 535 aa13.46□□□□□ -0.25
DDX41-219ENST00000629036 JAG1P78504 1218 aa13.46□□□□□ -0.25
DDX41-219ENST00000629036 MOGSQ13724 837 aa13.46□□□□□ -0.25
DDX41-219ENST00000629036 UBE3CQ15386 1083 aa13.46□□□□□ -0.25
DDX41-219ENST00000629036 CERS3Q8IU89 383 aa13.46□□□□□ -0.25
DDX41-219ENST00000629036 SLC10A4Q96EP9 437 aa13.46□□□□□ -0.25
DDX41-219ENST00000629036 CFHR5Q9BXR6 569 aa13.46□□□□□ -0.25
DDX41-219ENST00000629036 LNPKQ9C0E8 428 aa13.46□□□□□ -0.25
DDX41-219ENST00000629036 RWDD1Q9H446 243 aaPredicted RBP13.46□□□□□ -0.25
DDX41-219ENST00000629036 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.46□□□□□ -0.25
DDX41-219ENST00000629036 MGAMO43451 1857 aa13.46□□□□□ -0.26
DDX41-219ENST00000629036 GLRX3O76003 335 aaKnown RBP13.45□□□□□ -0.26
DDX41-219ENST00000629036 PKN2Q16513 984 aaKnown RBP13.45□□□□□ -0.26
DDX41-219ENST00000629036 SHROOM1Q2M3G4 852 aaPredicted RBP13.45□□□□□ -0.26
DDX41-219ENST00000629036 REM2Q8IYK8 340 aaPredicted RBP13.45□□□□□ -0.26
DDX41-219ENST00000629036 ZNF296Q8WUU4 475 aaPredicted RBP13.45□□□□□ -0.26
DDX41-219ENST00000629036 BRI3BPQ8WY22 251 aa13.45□□□□□ -0.26
DDX41-219ENST00000629036 GPATCH3Q96I76 525 aa13.45□□□□□ -0.26
DDX41-219ENST00000629036 PUS7LQ9H0K6 701 aaKnown RBP13.45□□□□□ -0.26
DDX41-219ENST00000629036 PALD1Q9ULE6 856 aa13.45□□□□□ -0.26
DDX41-219ENST00000629036 RLFQ13129 1914 aa13.45□□□□□ -0.26
DDX41-219ENST00000629036 MAGEB6P1A0A0J9YX57 407 aa13.44□□□□□ -0.26
DDX41-219ENST00000629036 MANSC4A6NHS7 340 aaPredicted RBP13.44□□□□□ -0.26
DDX41-219ENST00000629036 SMIM22K7EJ46 135 aa13.44□□□□□ -0.26
DDX41-219ENST00000629036 IRF6O14896 467 aa13.44□□□□□ -0.26
DDX41-219ENST00000629036 MBD4O95243 580 aa13.44□□□□□ -0.26
DDX41-219ENST00000629036 PDE4AP27815 886 aa13.44□□□□□ -0.26
DDX41-219ENST00000629036 PPIL2Q13356 520 aa13.44□□□□□ -0.26
DDX41-219ENST00000629036 CHD1LQ86WJ1 897 aa13.44□□□□□ -0.26
DDX41-219ENST00000629036 ERO1BQ86YB8 467 aa13.44□□□□□ -0.26
DDX41-219ENST00000629036 OSBP2Q969R2 916 aa13.44□□□□□ -0.26
DDX41-219ENST00000629036 OTUD5Q96G74 571 aa13.44□□□□□ -0.26
DDX41-219ENST00000629036 NOL10Q9BSC4 688 aaKnown RBP13.44□□□□□ -0.26
DDX41-219ENST00000629036 DHX36Q9H2U1 1008 aaKnown RBP13.44□□□□□ -0.26
DDX41-219ENST00000629036 R3HDMLQ9H3Y0 253 aa13.44□□□□□ -0.26
DDX41-219ENST00000629036 ARMT1Q9H993 441 aa13.44□□□□□ -0.26
DDX41-219ENST00000629036 SAP30BPQ9UHR5 308 aaKnown RBP13.44□□□□□ -0.26
DDX41-219ENST00000629036 KCNH4Q9UQ05 1017 aa13.44□□□□□ -0.26
DDX41-219ENST00000629036 CSADQ9Y600 493 aa13.44□□□□□ -0.26
DDX41-219ENST00000629036 FOXP2O15409 715 aa13.43□□□□□ -0.26
DDX41-219ENST00000629036 PRKAB2O43741 272 aa13.43□□□□□ -0.26
DDX41-219ENST00000629036 GABPAQ06546 454 aa13.43□□□□□ -0.26
DDX41-219ENST00000629036 IFNL1Q8IU54 200 aa13.43□□□□□ -0.26
DDX41-219ENST00000629036 PLEKHM2Q8IWE5 1019 aa13.43□□□□□ -0.26
DDX41-219ENST00000629036 ZSCAN29Q8IWY8 852 aaPredicted RBP13.43□□□□□ -0.26
DDX41-219ENST00000629036 SCYL3Q8IZE3 742 aa13.43□□□□□ -0.26
DDX41-219ENST00000629036 SDR42E1Q8WUS8 393 aa13.43□□□□□ -0.26
DDX41-219ENST00000629036 EHD4Q9H223 541 aa13.43□□□□□ -0.26
DDX41-219ENST00000629036 OSBPL3Q9H4L5 887 aa13.43□□□□□ -0.26
DDX41-219ENST00000629036 DCP1AQ9NPI6 582 aaPredicted RBP13.43□□□□□ -0.26
DDX41-219ENST00000629036 PI4KBQ9UBF8 816 aa13.43□□□□□ -0.26
DDX41-219ENST00000629036 HERC5Q9UII4 1024 aaKnown RBP13.43□□□□□ -0.26
DDX41-219ENST00000629036 KIAA0100Q14667 2235 aaKnown RBP13.43□□□□□ -0.26
DDX41-219ENST00000629036 RBBP6Q7Z6E9 1792 aaKnown RBP13.43□□□□□ -0.26
DDX41-219ENST00000629036 M0R2C6 588 aa13.42□□□□□ -0.26
DDX41-219ENST00000629036 ERC2O15083 957 aa13.42□□□□□ -0.26
DDX41-219ENST00000629036 CTNND1O60716 968 aaKnown RBP13.42□□□□□ -0.26
DDX41-219ENST00000629036 PTPRAP18433 802 aa13.42□□□□□ -0.26
DDX41-219ENST00000629036 FXR1P51114 621 aaKnown RBP eCLIP13.42□□□□□ -0.26
DDX41-219ENST00000629036 PLCD1P51178 756 aa13.42□□□□□ -0.26
DDX41-219ENST00000629036 PPATQ06203 517 aa13.42□□□□□ -0.26
DDX41-219ENST00000629036 SREBF2Q12772 1141 aa13.42□□□□□ -0.26
DDX41-219ENST00000629036 B4GALNT3Q6L9W6 998 aa13.42□□□□□ -0.26
DDX41-219ENST00000629036 CCDC84Q86UT8 332 aaPredicted RBP13.42□□□□□ -0.26
DDX41-219ENST00000629036 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.42□□□□□ -0.262e-6■□□□□ 10.4
DDX41-219ENST00000629036 MYH4Q9Y623 1939 aa13.41□□□□□ -0.26
DDX41-219ENST00000629036 DOCK3Q8IZD9 2030 aa13.41□□□□□ -0.26
DDX41-219ENST00000629036 RNF113AO15541 343 aaKnown RBP13.41□□□□□ -0.26
DDX41-219ENST00000629036 CYP2D6P10635 497 aa13.41□□□□□ -0.26
DDX41-219ENST00000629036 CAP2P40123 477 aa13.41□□□□□ -0.26
DDX41-219ENST00000629036 SLC4A8Q2Y0W8 1093 aa13.41□□□□□ -0.26
DDX41-219ENST00000629036 TATDN1Q6P1N9 297 aa13.41□□□□□ -0.26
DDX41-219ENST00000629036 FBXO46Q6PJ61 603 aaPredicted RBP13.41□□□□□ -0.26
DDX41-219ENST00000629036 FAM43AQ8N2R8 423 aa13.41□□□□□ -0.26
DDX41-219ENST00000629036 APPBP2Q92624 585 aa13.41□□□□□ -0.26
DDX41-219ENST00000629036 STRBPQ96SI9 672 aaKnown RBP13.41□□□□□ -0.26
DDX41-219ENST00000629036 CRNKL1Q9BZJ0 848 aaKnown RBP13.41□□□□□ -0.26
DDX41-219ENST00000629036 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.41□□□□□ -0.26
DDX41-219ENST00000629036 EPB41L4AQ9HCS5 686 aaPredicted RBP13.41□□□□□ -0.26
DDX41-219ENST00000629036 AFG3L2Q9Y4W6 797 aa13.41□□□□□ -0.26
DDX41-219ENST00000629036 BRCA2P51587 3418 aa13.41□□□□□ -0.26
DDX41-219ENST00000629036 ADGRA2Q96PE1 1338 aa13.4□□□□□ -0.26
DDX41-219ENST00000629036 A0A0G2JMZ2 1700 aa13.4□□□□□ -0.26
DDX41-219ENST00000629036 SHMT1P34896 483 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 1436.4 ms