RNA–Protein interactions for RNA: ENST00000628867.1

SPTAN1-215, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-215ENST00000628867 SEMA6BQ9H3T3 888 aa9.5□□□□□ -0.89
SPTAN1-215ENST00000628867 PRKRIP1Q9H875 184 aaPredicted RBP9.5□□□□□ -0.89
SPTAN1-215ENST00000628867 CEP126Q9P2H0 1117 aa9.5□□□□□ -0.89
SPTAN1-215ENST00000628867 PFASO15067 1338 aa9.5□□□□□ -0.89
SPTAN1-215ENST00000628867 DDTLA6NHG4 134 aaPredicted RBP9.49□□□□□ -0.89
SPTAN1-215ENST00000628867 EYA2O00167 538 aa9.49□□□□□ -0.89
SPTAN1-215ENST00000628867 MYCNP04198 464 aaPredicted RBP9.49□□□□□ -0.89
SPTAN1-215ENST00000628867 NCBP3Q53F19 620 aaKnown RBP9.49□□□□□ -0.89
SPTAN1-215ENST00000628867 WDR78Q5VTH9 848 aa9.49□□□□□ -0.89
SPTAN1-215ENST00000628867 PRDM5Q9NQX1 630 aaPredicted RBP9.49□□□□□ -0.89
SPTAN1-215ENST00000628867 FANCIQ9NVI1 1328 aa9.49□□□□□ -0.89
SPTAN1-215ENST00000628867 TNFRSF10AO00220 468 aa9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 SEMA3EO15041 775 aa9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 TBC1D12O60347 775 aa9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 LDHCP07864 332 aa9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 COL6A1P12109 1028 aa9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 FGFR2P21802 821 aa9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 CCND3P30281 292 aaPredicted RBP9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 BTDP43251 543 aa9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 CCNA1P78396 465 aa9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 ATP2B2Q01814 1243 aa9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 MAP3K10Q02779 954 aa9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 ATP2B3Q16720 1220 aa9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 RABL6Q3YEC7 729 aaPredicted RBP9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 ERICH6Q7L0X2 663 aa9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 PLEKHH3Q7Z736 793 aa9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 WDR63Q8IWG1 891 aa9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 VGLL2Q8N8G2 317 aa9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 IL27Q8NEV9 243 aa9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 MYLIPQ8WY64 445 aa9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 EDC3Q96F86 508 aaKnown RBP9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 NOL10Q9BSC4 688 aaKnown RBP9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 PAGR1Q9BTK6 254 aa9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 ATP11BQ9Y2G3 1177 aa9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 MGAMO43451 1857 aa9.48□□□□□ -0.89
SPTAN1-215ENST00000628867 C19orf81C9J6K1 198 aa9.47□□□□□ -0.89
SPTAN1-215ENST00000628867 MSCO60682 206 aa9.47□□□□□ -0.89
SPTAN1-215ENST00000628867 CAP2P40123 477 aa9.47□□□□□ -0.89
SPTAN1-215ENST00000628867 GSTO1P78417 241 aa9.47□□□□□ -0.89
SPTAN1-215ENST00000628867 SHHQ15465 462 aa9.47□□□□□ -0.89
SPTAN1-215ENST00000628867 TJAP1Q5JTD0 557 aa9.47□□□□□ -0.89
SPTAN1-215ENST00000628867 MAP3K21Q5TCX8 1036 aa9.47□□□□□ -0.89
SPTAN1-215ENST00000628867 SH3BP5LQ7L8J4 393 aa9.47□□□□□ -0.89
SPTAN1-215ENST00000628867 ARRDC4Q8NCT1 418 aa9.47□□□□□ -0.89
SPTAN1-215ENST00000628867 GTF3C2Q8WUA4 911 aaPredicted RBP9.47□□□□□ -0.89
SPTAN1-215ENST00000628867 FAM122AQ96E09 287 aa9.47□□□□□ -0.89
SPTAN1-215ENST00000628867 KAZALD1Q96I82 304 aa9.47□□□□□ -0.89
SPTAN1-215ENST00000628867 P2RX7Q99572 595 aaKnown RBP9.47□□□□□ -0.89
SPTAN1-215ENST00000628867 SIL1Q9H173 461 aa9.47□□□□□ -0.89
SPTAN1-215ENST00000628867 MORF4L1Q9UBU8 362 aa9.47□□□□□ -0.89
SPTAN1-215ENST00000628867 IVNS1ABPQ9Y6Y0 642 aa9.47□□□□□ -0.89
SPTAN1-215ENST00000628867 COL6A3P12111 3177 aa9.47□□□□□ -0.89
SPTAN1-215ENST00000628867 TMEM265A0A087WTH1 108 aa9.46□□□□□ -0.9
SPTAN1-215ENST00000628867 FAM196BA6NMK8 535 aa9.46□□□□□ -0.9
SPTAN1-215ENST00000628867 KBTBD13C9JR72 458 aa9.46□□□□□ -0.9
SPTAN1-215ENST00000628867 SLURP2P0DP57 97 aa9.46□□□□□ -0.9
SPTAN1-215ENST00000628867 BACE1P56817 501 aa9.46□□□□□ -0.9
SPTAN1-215ENST00000628867 HERVK_113P62684 666 aa9.46□□□□□ -0.9
SPTAN1-215ENST00000628867 MTMR2Q13614 643 aa9.46□□□□□ -0.9
SPTAN1-215ENST00000628867 LHX8Q68G74 356 aa9.46□□□□□ -0.9
SPTAN1-215ENST00000628867 GPR142Q7Z601 462 aa9.46□□□□□ -0.9
SPTAN1-215ENST00000628867 CRACR2BQ8N4Y2 399 aaPredicted RBP9.46□□□□□ -0.9
SPTAN1-215ENST00000628867 ANKRD44Q8N8A2 993 aa9.46□□□□□ -0.9
SPTAN1-215ENST00000628867 APBA2Q99767 749 aa9.46□□□□□ -0.9
SPTAN1-215ENST00000628867 HDAC5Q9UQL6 1122 aa9.46□□□□□ -0.9
SPTAN1-215ENST00000628867 SALL1Q9NSC2 1324 aa9.46□□□□□ -0.9
SPTAN1-215ENST00000628867 USP17L10C9JJH3 530 aa9.45□□□□□ -0.9
SPTAN1-215ENST00000628867 ASNSP08243 561 aa9.45□□□□□ -0.9
SPTAN1-215ENST00000628867 RTP1P59025 263 aa9.45□□□□□ -0.9
SPTAN1-215ENST00000628867 ERVK-9P63128 1117 aa9.45□□□□□ -0.9
SPTAN1-215ENST00000628867 ERVK-24P63145 666 aa9.45□□□□□ -0.9
SPTAN1-215ENST00000628867 SMAD3P84022 425 aaKnown RBP9.45□□□□□ -0.9
SPTAN1-215ENST00000628867 CCL14Q16627 93 aa9.45□□□□□ -0.9
SPTAN1-215ENST00000628867 SH3D19Q5HYK7 790 aa9.45□□□□□ -0.9
SPTAN1-215ENST00000628867 GORABQ5T7V8 394 aa9.45□□□□□ -0.9
SPTAN1-215ENST00000628867 PPM1EQ8WY54 764 aa9.45□□□□□ -0.9
SPTAN1-215ENST00000628867 LPAR1Q92633 364 aa9.45□□□□□ -0.9
SPTAN1-215ENST00000628867 DDX4Q9NQI0 724 aaKnown RBP9.45□□□□□ -0.9
SPTAN1-215ENST00000628867 PI4KBQ9UBF8 816 aa9.45□□□□□ -0.9
SPTAN1-215ENST00000628867 DDX20Q9UHI6 824 aaKnown RBP9.45□□□□□ -0.9
SPTAN1-215ENST00000628867 HERC5Q9UII4 1024 aaKnown RBP9.45□□□□□ -0.9
SPTAN1-215ENST00000628867 DNM1LO00429 736 aa9.44□□□□□ -0.9
SPTAN1-215ENST00000628867 MAP4K4O95819 1239 aaPredicted RBP9.44□□□□□ -0.9
SPTAN1-215ENST00000628867 HOXA7P31268 230 aaPredicted RBP9.44□□□□□ -0.9
SPTAN1-215ENST00000628867 PHKA1P46020 1223 aa9.44□□□□□ -0.9
SPTAN1-215ENST00000628867 MAP2K5Q13163 448 aa9.44□□□□□ -0.9
SPTAN1-215ENST00000628867 CCDC102BQ68D86 513 aa9.44□□□□□ -0.9
SPTAN1-215ENST00000628867 DPP9Q86TI2 863 aa9.44□□□□□ -0.9
SPTAN1-215ENST00000628867 BADQ92934 168 aa9.44□□□□□ -0.9
SPTAN1-215ENST00000628867 FAM163AQ96GL9 167 aaPredicted RBP9.44□□□□□ -0.9
SPTAN1-215ENST00000628867 RNPC3Q96LT9 517 aaKnown RBP9.44□□□□□ -0.9
SPTAN1-215ENST00000628867 RAI14Q9P0K7 980 aa9.44□□□□□ -0.9
SPTAN1-215ENST00000628867 FBXO3Q9UK99 471 aa9.44□□□□□ -0.9
SPTAN1-215ENST00000628867 NDUFB9Q9Y6M9 179 aa9.44□□□□□ -0.9
SPTAN1-215ENST00000628867 MROH7-TTC4A0A0A0MT08 1334 aa9.44□□□□□ -0.9
SPTAN1-215ENST00000628867 UTYO14607 1347 aa9.44□□□□□ -0.9
SPTAN1-215ENST00000628867 GAKO14976 1311 aa9.44□□□□□ -0.9
SPTAN1-215ENST00000628867 DDX60LQ5H9U9 1706 aaKnown RBP9.43□□□□□ -0.9
SPTAN1-215ENST00000628867 ATRNL1Q5VV63 1379 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms