RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 GIMAP6Q6P9H5 292 aa9.36□□□□□ -0.91
NR1I3-235ENST00000628566 ERO1BQ86YB8 467 aa9.36□□□□□ -0.91
NR1I3-235ENST00000628566 ZFPM1Q8IX07 1006 aa9.36□□□□□ -0.91
NR1I3-235ENST00000628566 LCORLQ8N3X6 602 aa9.36□□□□□ -0.91
NR1I3-235ENST00000628566 OPTNQ96CV9 577 aa9.36□□□□□ -0.91
NR1I3-235ENST00000628566 WNK4Q96J92 1243 aa9.36□□□□□ -0.91
NR1I3-235ENST00000628566 ARMT1Q9H993 441 aa9.36□□□□□ -0.91
NR1I3-235ENST00000628566 ELP3Q9H9T3 547 aa9.36□□□□□ -0.91
NR1I3-235ENST00000628566 ZNF287Q9HBT7 754 aa9.36□□□□□ -0.91
NR1I3-235ENST00000628566 DIAPH3Q9NSV4 1193 aa9.36□□□□□ -0.91
NR1I3-235ENST00000628566 GINM1Q9NU53 330 aa9.36□□□□□ -0.91
NR1I3-235ENST00000628566 ARPP21Q9UBL0 812 aaPredicted RBP9.36□□□□□ -0.91
NR1I3-235ENST00000628566 SAP30BPQ9UHR5 308 aaKnown RBP9.36□□□□□ -0.91
NR1I3-235ENST00000628566 SERPINB13Q9UIV8 391 aa9.36□□□□□ -0.91
NR1I3-235ENST00000628566 ZNF112Q9UJU3 913 aa9.36□□□□□ -0.91
NR1I3-235ENST00000628566 SLC4A4Q9Y6R1 1079 aa9.36□□□□□ -0.91
NR1I3-235ENST00000628566 CEP350Q5VT06 3117 aa9.36□□□□□ -0.91
NR1I3-235ENST00000628566 SPDYE5A6NIY4 337 aa9.35□□□□□ -0.91
NR1I3-235ENST00000628566 FAM155AB1AL88 458 aaPredicted RBP9.35□□□□□ -0.91
NR1I3-235ENST00000628566 SLC3A2P08195 630 aaKnown RBP9.35□□□□□ -0.91
NR1I3-235ENST00000628566 GTF2A2P52657 109 aa9.35□□□□□ -0.91
NR1I3-235ENST00000628566 MAP3K10Q02779 954 aa9.35□□□□□ -0.91
NR1I3-235ENST00000628566 NOL9Q5SY16 702 aaKnown RBP9.35□□□□□ -0.91
NR1I3-235ENST00000628566 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.35□□□□□ -0.91
NR1I3-235ENST00000628566 CDAN1Q8IWY9 1227 aa9.35□□□□□ -0.91
NR1I3-235ENST00000628566 SCYL3Q8IZE3 742 aa9.35□□□□□ -0.91
NR1I3-235ENST00000628566 ZKSCAN4Q969J2 545 aaPredicted RBP9.35□□□□□ -0.91
NR1I3-235ENST00000628566 OTUD5Q96G74 571 aa9.35□□□□□ -0.91
NR1I3-235ENST00000628566 EHD4Q9H223 541 aa9.35□□□□□ -0.91
NR1I3-235ENST00000628566 AS3MTQ9HBK9 375 aa9.35□□□□□ -0.91
NR1I3-235ENST00000628566 HELLSQ9NRZ9 838 aa9.35□□□□□ -0.91
NR1I3-235ENST00000628566 SWAP70Q9UH65 585 aa9.35□□□□□ -0.91
NR1I3-235ENST00000628566 PALD1Q9ULE6 856 aa9.35□□□□□ -0.91
NR1I3-235ENST00000628566 FZD1Q9UP38 647 aa9.35□□□□□ -0.91
NR1I3-235ENST00000628566 FOCADQ5VW36 1801 aa9.35□□□□□ -0.91
NR1I3-235ENST00000628566 THSD7BQ9C0I4 1608 aa9.34□□□□□ -0.91
NR1I3-235ENST00000628566 GPAA1O43292 621 aa9.34□□□□□ -0.91
NR1I3-235ENST00000628566 ASNSP08243 561 aa9.34□□□□□ -0.91
NR1I3-235ENST00000628566 HSPA1AP0DMV8 641 aaKnown RBP9.34□□□□□ -0.91
NR1I3-235ENST00000628566 HSPA1BP0DMV9 641 aaKnown RBP9.34□□□□□ -0.91
NR1I3-235ENST00000628566 CETPP11597 493 aa9.34□□□□□ -0.91
NR1I3-235ENST00000628566 TDO2P48775 406 aa9.34□□□□□ -0.91
NR1I3-235ENST00000628566 CTCFP49711 727 aaPredicted RBP9.34□□□□□ -0.91
NR1I3-235ENST00000628566 MKRN3Q13064 507 aaKnown RBP9.34□□□□□ -0.91
NR1I3-235ENST00000628566 PPIL2Q13356 520 aa9.34□□□□□ -0.91
NR1I3-235ENST00000628566 SNAPC2Q13487 334 aa9.34□□□□□ -0.91
NR1I3-235ENST00000628566 MCMDC2Q4G0Z9 681 aa9.34□□□□□ -0.91
NR1I3-235ENST00000628566 SH3BP5LQ7L8J4 393 aa9.34□□□□□ -0.91
NR1I3-235ENST00000628566 SDR42E1Q8WUS8 393 aa9.34□□□□□ -0.91
NR1I3-235ENST00000628566 RUFY2Q8WXA3 655 aa9.34□□□□□ -0.91
NR1I3-235ENST00000628566 CLMNQ96JQ2 1002 aa9.34□□□□□ -0.91
NR1I3-235ENST00000628566 STRBPQ96SI9 672 aaKnown RBP9.34□□□□□ -0.91
NR1I3-235ENST00000628566 PUS7LQ9H0K6 701 aaKnown RBP9.34□□□□□ -0.91
NR1I3-235ENST00000628566 CABP5Q9NP86 173 aa9.34□□□□□ -0.91
NR1I3-235ENST00000628566 DCP1AQ9NPI6 582 aaPredicted RBP9.34□□□□□ -0.91
NR1I3-235ENST00000628566 WBP1LQ9NX94 342 aa9.34□□□□□ -0.91
NR1I3-235ENST00000628566 SAGE1Q9NXZ1 904 aa9.34□□□□□ -0.91
NR1I3-235ENST00000628566 PATL2C9JE40 543 aaKnown RBP9.33□□□□□ -0.92
NR1I3-235ENST00000628566 CXCL11O14625 94 aa9.33□□□□□ -0.92
NR1I3-235ENST00000628566 INPP5BP32019 993 aa9.33□□□□□ -0.92
NR1I3-235ENST00000628566 CAP2P40123 477 aa9.33□□□□□ -0.92
NR1I3-235ENST00000628566 ZMYM1Q5SVZ6 1142 aa9.33□□□□□ -0.92
NR1I3-235ENST00000628566 TTC22Q5TAA0 569 aa9.33□□□□□ -0.92
NR1I3-235ENST00000628566 METTL16Q86W50 562 aaKnown RBP9.33□□□□□ -0.92
NR1I3-235ENST00000628566 OSBP2Q969R2 916 aa9.33□□□□□ -0.92
NR1I3-235ENST00000628566 NAPBQ9H115 298 aa9.33□□□□□ -0.92
NR1I3-235ENST00000628566 PPP4R2Q9NY27 417 aa9.33□□□□□ -0.92
NR1I3-235ENST00000628566 SNCAIPQ9Y6H5 919 aa9.33□□□□□ -0.92
NR1I3-235ENST00000628566 NAV1Q8NEY1 1877 aa9.33□□□□□ -0.92
NR1I3-235ENST00000628566 MYH1P12882 1939 aa9.33□□□□□ -0.92
NR1I3-235ENST00000628566 USP17L5A8MUK1 530 aa9.32□□□□□ -0.92
NR1I3-235ENST00000628566 PHF20L1A8MW92 1017 aa9.32□□□□□ -0.92
NR1I3-235ENST00000628566 SDSP20132 328 aa9.32□□□□□ -0.92
NR1I3-235ENST00000628566 TM4SF4P48230 202 aa9.32□□□□□ -0.92
NR1I3-235ENST00000628566 SLC4A8Q2Y0W8 1093 aa9.32□□□□□ -0.92
NR1I3-235ENST00000628566 CERKLQ49MI3 558 aaPredicted RBP9.32□□□□□ -0.92
NR1I3-235ENST00000628566 CASC1Q6TDU7 716 aa9.32□□□□□ -0.92
NR1I3-235ENST00000628566 FASTKD5Q7L8L6 764 aaKnown RBP9.32□□□□□ -0.92
NR1I3-235ENST00000628566 CCDC17Q96LX7 622 aa9.32□□□□□ -0.92
NR1I3-235ENST00000628566 ZCCHC17Q9NP64 241 aaKnown RBP9.32□□□□□ -0.92
NR1I3-235ENST00000628566 ZHX2Q9Y6X8 837 aa9.32□□□□□ -0.92
NR1I3-235ENST00000628566 CDK5RAP2Q96SN8 1893 aa9.32□□□□□ -0.92
NR1I3-235ENST00000628566 OTOFQ9HC10 1997 aa9.32□□□□□ -0.92
NR1I3-235ENST00000628566 CCL15-CCL14A0A0B4J2E2 113 aa9.31□□□□□ -0.92
NR1I3-235ENST00000628566 FAM196BA6NMK8 535 aa9.31□□□□□ -0.92
NR1I3-235ENST00000628566 MINDY4BA8MYZ0 360 aa9.31□□□□□ -0.92
NR1I3-235ENST00000628566 USP17L12C9JPN9 530 aa9.31□□□□□ -0.92
NR1I3-235ENST00000628566 USP17L21D6R901 530 aa9.31□□□□□ -0.92
NR1I3-235ENST00000628566 M0R2C6 588 aa9.31□□□□□ -0.92
NR1I3-235ENST00000628566 PRKAB2O43741 272 aa9.31□□□□□ -0.92
NR1I3-235ENST00000628566 PTPRAP18433 802 aa9.31□□□□□ -0.92
NR1I3-235ENST00000628566 PDE4BQ07343 736 aa9.31□□□□□ -0.92
NR1I3-235ENST00000628566 PABPC4Q13310 644 aaKnown RBP eCLIP9.31□□□□□ -0.92
NR1I3-235ENST00000628566 CCL15Q16663 113 aa9.31□□□□□ -0.92
NR1I3-235ENST00000628566 ABCB5Q2M3G0 1257 aa9.31□□□□□ -0.92
NR1I3-235ENST00000628566 SLFNL1Q499Z3 407 aa9.31□□□□□ -0.92
NR1I3-235ENST00000628566 SBK1Q52WX2 424 aa9.31□□□□□ -0.92
NR1I3-235ENST00000628566 C12orf60Q5U649 245 aa9.31□□□□□ -0.92
NR1I3-235ENST00000628566 IFNL3Q8IZI9 196 aa9.31□□□□□ -0.92
NR1I3-235ENST00000628566 MKNK2Q9HBH9 465 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms