RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 CPA4Q9UI42 421 aa14.79□□□□□ -0.04
UBR1-212ENST00000627960 RBBP6Q7Z6E9 1792 aaKnown RBP14.78□□□□□ -0.04
UBR1-212ENST00000627960 HTTP42858 3142 aa14.78□□□□□ -0.04
UBR1-212ENST00000627960 HMMRO75330 724 aa14.78□□□□□ -0.04
UBR1-212ENST00000627960 GNRH1P01148 92 aa14.78□□□□□ -0.04
UBR1-212ENST00000627960 CYP7A1P22680 504 aa14.78□□□□□ -0.04
UBR1-212ENST00000627960 GADL1Q6ZQY3 521 aa14.78□□□□□ -0.04
UBR1-212ENST00000627960 MAPKAPK5Q8IW41 473 aa14.78□□□□□ -0.04
UBR1-212ENST00000627960 TGFBRAP1Q8WUH2 860 aa14.78□□□□□ -0.04
UBR1-212ENST00000627960 PARK7Q99497 189 aaKnown RBP14.78□□□□□ -0.04
UBR1-212ENST00000627960 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.78□□□□□ -0.04
UBR1-212ENST00000627960 PI4KBQ9UBF8 816 aa14.78□□□□□ -0.04
UBR1-212ENST00000627960 HERC5Q9UII4 1024 aaKnown RBP14.78□□□□□ -0.04
UBR1-212ENST00000627960 NDUFB9Q9Y6M9 179 aa14.78□□□□□ -0.04
UBR1-212ENST00000627960 KIAA0100Q14667 2235 aaKnown RBP14.78□□□□□ -0.04
UBR1-212ENST00000627960 MYH1P12882 1939 aa14.78□□□□□ -0.04
UBR1-212ENST00000627960 MGAMO43451 1857 aa14.78□□□□□ -0.04
UBR1-212ENST00000627960 FLT1P17948 1338 aa14.77□□□□□ -0.04
UBR1-212ENST00000627960 IDH1O75874 414 aaKnown RBP14.77□□□□□ -0.05
UBR1-212ENST00000627960 CAP2P40123 477 aa14.77□□□□□ -0.05
UBR1-212ENST00000627960 DYNLL1P63167 89 aaKnown RBP14.77□□□□□ -0.05
UBR1-212ENST00000627960 RRP1BQ14684 758 aaKnown RBP14.77□□□□□ -0.05
UBR1-212ENST00000627960 CCDC84Q86UT8 332 aaPredicted RBP14.77□□□□□ -0.05
UBR1-212ENST00000627960 KIF1BPQ96EK5 621 aa14.77□□□□□ -0.05
UBR1-212ENST00000627960 ANTXR1Q9H6X2 564 aa14.77□□□□□ -0.05
UBR1-212ENST00000627960 SLC45A1Q9Y2W3 748 aa14.77□□□□□ -0.05
UBR1-212ENST00000627960 PTCH2Q9Y6C5 1203 aa14.77□□□□□ -0.05
UBR1-212ENST00000627960 TRIM75PA6NK02 468 aa14.76□□□□□ -0.05
UBR1-212ENST00000627960 APBB1O00213 710 aa14.76□□□□□ -0.05
UBR1-212ENST00000627960 RAB11FIP3O75154 756 aa14.76□□□□□ -0.05
UBR1-212ENST00000627960 CYP2C8P10632 490 aa14.76□□□□□ -0.05
UBR1-212ENST00000627960 BCRP11274 1271 aa14.76□□□□□ -0.05
UBR1-212ENST00000627960 CTGFP29279 349 aa14.76□□□□□ -0.05
UBR1-212ENST00000627960 PRMT2P55345 433 aa14.76□□□□□ -0.05
UBR1-212ENST00000627960 MAP3K12Q12852 859 aa14.76□□□□□ -0.05
UBR1-212ENST00000627960 PDE3AQ14432 1141 aa14.76□□□□□ -0.05
UBR1-212ENST00000627960 C20orf194Q5TEA3 1177 aa14.76□□□□□ -0.05
UBR1-212ENST00000627960 TMED8Q6PL24 325 aaPredicted RBP14.76□□□□□ -0.05
UBR1-212ENST00000627960 FOXP4Q8IVH2 680 aaPredicted RBP14.76□□□□□ -0.05
UBR1-212ENST00000627960 CLASRPQ8N2M8 674 aaKnown RBP14.76□□□□□ -0.05
UBR1-212ENST00000627960 MAGEB6Q8N7X4 407 aa14.76□□□□□ -0.05
UBR1-212ENST00000627960 PSMC4P43686 418 aa14.75□□□□□ -0.05
UBR1-212ENST00000627960 SLC9C1Q4G0N8 1177 aa14.75□□□□□ -0.05
UBR1-212ENST00000627960 NBPF11Q86T75 865 aa14.75□□□□□ -0.05
UBR1-212ENST00000627960 METTL16Q86W50 562 aaKnown RBP14.75□□□□□ -0.05
UBR1-212ENST00000627960 MIGA1Q8NAN2 632 aa14.75□□□□□ -0.05
UBR1-212ENST00000627960 ZNF333Q96JL9 665 aa14.75□□□□□ -0.05
UBR1-212ENST00000627960 TBC1D2Q9BYX2 928 aa14.75□□□□□ -0.05
UBR1-212ENST00000627960 PALD1Q9ULE6 856 aa14.75□□□□□ -0.05
UBR1-212ENST00000627960 LOC285556D6RIA3 1793 aa14.75□□□□□ -0.05
UBR1-212ENST00000627960 POTEFA5A3E0 1075 aa14.74□□□□□ -0.05
UBR1-212ENST00000627960 USP17L5A8MUK1 530 aa14.74□□□□□ -0.05
UBR1-212ENST00000627960 ECM2O94769 699 aaPredicted RBP14.74□□□□□ -0.05
UBR1-212ENST00000627960 IFIT2P09913 472 aaKnown RBP14.74□□□□□ -0.05
UBR1-212ENST00000627960 SPP2Q13103 211 aa14.74□□□□□ -0.05
UBR1-212ENST00000627960 TTF1Q15361 905 aaPredicted RBP14.74□□□□□ -0.05
UBR1-212ENST00000627960 CERS3Q8IU89 383 aa14.74□□□□□ -0.05
UBR1-212ENST00000627960 PROCA1Q8NCQ7 364 aaPredicted RBP14.74□□□□□ -0.05
UBR1-212ENST00000627960 ZNF280CQ8ND82 737 aa14.74□□□□□ -0.05
UBR1-212ENST00000627960 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.74□□□□□ -0.05
UBR1-212ENST00000627960 TRIM47Q96LD4 638 aa14.74□□□□□ -0.05
UBR1-212ENST00000627960 AGTPBP1Q9UPW5 1226 aa14.74□□□□□ -0.05
UBR1-212ENST00000627960 FMNL1O95466 1100 aaPredicted RBP14.73□□□□□ -0.05
UBR1-212ENST00000627960 OSBPP22059 807 aa14.73□□□□□ -0.05
UBR1-212ENST00000627960 HOXD10P28358 340 aa14.73□□□□□ -0.05
UBR1-212ENST00000627960 CRACR2BQ8N4Y2 399 aaPredicted RBP14.73□□□□□ -0.05
UBR1-212ENST00000627960 TRIM34Q9BYJ4 488 aa14.73□□□□□ -0.05
UBR1-212ENST00000627960 DNAJC18Q9H819 358 aa14.73□□□□□ -0.05
UBR1-212ENST00000627960 AS3MTQ9HBK9 375 aa14.73□□□□□ -0.05
UBR1-212ENST00000627960 SRRDQ9UH36 339 aa14.73□□□□□ -0.05
UBR1-212ENST00000627960 SAP30BPQ9UHR5 308 aaKnown RBP14.73□□□□□ -0.05
UBR1-212ENST00000627960 HLA-DOAP06340 250 aa14.72□□□□□ -0.05
UBR1-212ENST00000627960 USP5P45974 858 aa14.72□□□□□ -0.05
UBR1-212ENST00000627960 JAG1P78504 1218 aa14.72□□□□□ -0.05
UBR1-212ENST00000627960 TREML2Q5T2D2 321 aa14.72□□□□□ -0.05
UBR1-212ENST00000627960 WDR18Q9BV38 432 aa14.72□□□□□ -0.05
UBR1-212ENST00000627960 TMEM106CQ9BVX2 250 aa14.72□□□□□ -0.05
UBR1-212ENST00000627960 GINM1Q9NU53 330 aa14.72□□□□□ -0.05
UBR1-212ENST00000627960 CENPFP49454 3210 aa14.72□□□□□ -0.05
UBR1-212ENST00000627960 ASNSP08243 561 aa14.71□□□□□ -0.05
UBR1-212ENST00000627960 HMGCS2P54868 508 aa14.71□□□□□ -0.05
UBR1-212ENST00000627960 FCGRTP55899 365 aa14.71□□□□□ -0.05
UBR1-212ENST00000627960 SH3D19Q5HYK7 790 aa14.71□□□□□ -0.05
UBR1-212ENST00000627960 SLC9C2Q5TAH2 1124 aa14.71□□□□□ -0.05
UBR1-212ENST00000627960 SMCR8Q8TEV9 937 aaPredicted RBP14.71□□□□□ -0.05
UBR1-212ENST00000627960 SH3TC2Q8TF17 1288 aa14.71□□□□□ -0.05
UBR1-212ENST00000627960 DNAJC2Q99543 621 aaKnown RBP14.71□□□□□ -0.05
UBR1-212ENST00000627960 RIOK1Q9BRS2 568 aaKnown RBP14.71□□□□□ -0.05
UBR1-212ENST00000627960 BCL11AQ9H165 835 aa14.71□□□□□ -0.05
UBR1-212ENST00000627960 PNMA3Q9UL41 463 aa14.71□□□□□ -0.05
UBR1-212ENST00000627960 DOCK3Q8IZD9 2030 aa14.71□□□□□ -0.05
UBR1-212ENST00000627960 MYPNQ86TC9 1320 aa14.7□□□□□ -0.06
UBR1-212ENST00000627960 MAGEB6P1A0A0J9YX57 407 aa14.7□□□□□ -0.06
UBR1-212ENST00000627960 GOLIM4O00461 696 aa14.7□□□□□ -0.06
UBR1-212ENST00000627960 GDF11O95390 407 aa14.7□□□□□ -0.06
UBR1-212ENST00000627960 PDE6AP16499 860 aa14.7□□□□□ -0.06
UBR1-212ENST00000627960 EN2P19622 333 aaPredicted RBP14.7□□□□□ -0.06
UBR1-212ENST00000627960 PABPC4Q13310 644 aaKnown RBP eCLIP14.7□□□□□ -0.06
UBR1-212ENST00000627960 SLC4A8Q2Y0W8 1093 aa14.7□□□□□ -0.06
UBR1-212ENST00000627960 MYH7P12883 1935 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms