RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 RFX7Q2KHR2 1363 aa9.56□□□□□ -0.88
TCF4-260ENST00000627685 ZBTB7BO15156 539 aaPredicted RBP9.56□□□□□ -0.88
TCF4-260ENST00000627685 LILRB3O75022 631 aa9.56□□□□□ -0.88
TCF4-260ENST00000627685 CIAO1O76071 339 aa9.56□□□□□ -0.88
TCF4-260ENST00000627685 SASH1O94885 1247 aa9.56□□□□□ -0.88
TCF4-260ENST00000627685 USP17L8P0C7I0 530 aa9.56□□□□□ -0.88
TCF4-260ENST00000627685 VEGFBP49765 207 aa9.56□□□□□ -0.88
TCF4-260ENST00000627685 PRR20EP86478 221 aa9.56□□□□□ -0.88
TCF4-260ENST00000627685 PRR20CP86479 221 aa9.56□□□□□ -0.88
TCF4-260ENST00000627685 PRR20DP86480 221 aa9.56□□□□□ -0.88
TCF4-260ENST00000627685 PRR20BP86481 221 aa9.56□□□□□ -0.88
TCF4-260ENST00000627685 PRR20AP86496 221 aa9.56□□□□□ -0.88
TCF4-260ENST00000627685 SKIV2LQ15477 1246 aaKnown RBP9.56□□□□□ -0.88
TCF4-260ENST00000627685 PTPRNQ16849 979 aa9.56□□□□□ -0.88
TCF4-260ENST00000627685 DEFB115Q30KQ5 88 aa9.56□□□□□ -0.88
TCF4-260ENST00000627685 SAPCD2Q86UD0 394 aa9.56□□□□□ -0.88
TCF4-260ENST00000627685 MTMR14Q8NCE2 650 aa9.56□□□□□ -0.88
TCF4-260ENST00000627685 HHIPL1Q96JK4 782 aa9.56□□□□□ -0.88
TCF4-260ENST00000627685 PKD2L1Q9P0L9 805 aa9.56□□□□□ -0.88
TCF4-260ENST00000627685 MYO3BQ8WXR4 1341 aa9.56□□□□□ -0.88
TCF4-260ENST00000627685 ECM29Q5VYK3 1845 aa9.55□□□□□ -0.88
TCF4-260ENST00000627685 FAM155AB1AL88 458 aaPredicted RBP9.55□□□□□ -0.88
TCF4-260ENST00000627685 HSPA1AP0DMV8 641 aaKnown RBP9.55□□□□□ -0.88
TCF4-260ENST00000627685 HSPA1BP0DMV9 641 aaKnown RBP9.55□□□□□ -0.88
TCF4-260ENST00000627685 ADORA1P30542 326 aa9.55□□□□□ -0.88
TCF4-260ENST00000627685 ANGEL2Q5VTE6 544 aaKnown RBP9.55□□□□□ -0.88
TCF4-260ENST00000627685 ZKSCAN2Q63HK3 967 aa9.55□□□□□ -0.88
TCF4-260ENST00000627685 USP48Q86UV5 1035 aa9.55□□□□□ -0.88
TCF4-260ENST00000627685 KIAA0825Q8IV33 1275 aa9.55□□□□□ -0.88
TCF4-260ENST00000627685 ZIC5Q96T25 663 aa9.55□□□□□ -0.88
TCF4-260ENST00000627685 EVA1BQ9NVM1 165 aa9.55□□□□□ -0.88
TCF4-260ENST00000627685 PLIN1O60240 522 aa9.54□□□□□ -0.88
TCF4-260ENST00000627685 SCARF1Q14162 830 aa9.54□□□□□ -0.88
TCF4-260ENST00000627685 SH3D19Q5HYK7 790 aa9.54□□□□□ -0.88
TCF4-260ENST00000627685 METTL24Q5JXM2 366 aa9.54□□□□□ -0.88
TCF4-260ENST00000627685 TTLL5Q6EMB2 1281 aa9.54□□□□□ -0.88
TCF4-260ENST00000627685 LYPD8Q6UX82 237 aa9.54□□□□□ -0.88
TCF4-260ENST00000627685 PANK1Q8TE04 598 aa9.54□□□□□ -0.88
TCF4-260ENST00000627685 ZNF384Q8TF68 577 aa9.54□□□□□ -0.88
TCF4-260ENST00000627685 FRAT1Q92837 279 aaPredicted RBP9.54□□□□□ -0.88
TCF4-260ENST00000627685 CDCA5Q96FF9 252 aa9.54□□□□□ -0.88
TCF4-260ENST00000627685 C1orf115Q9H7X2 142 aa9.54□□□□□ -0.88
TCF4-260ENST00000627685 CELF2O95319 508 aaKnown RBP9.53□□□□□ -0.88
TCF4-260ENST00000627685 HIBADHP31937 336 aaKnown RBP9.53□□□□□ -0.88
TCF4-260ENST00000627685 CTHP32929 405 aa9.53□□□□□ -0.88
TCF4-260ENST00000627685 ECE1P42892 770 aa9.53□□□□□ -0.88
TCF4-260ENST00000627685 PHKA1P46020 1223 aa9.53□□□□□ -0.88
TCF4-260ENST00000627685 KCNH2Q12809 1159 aa9.53□□□□□ -0.88
TCF4-260ENST00000627685 PUM3Q15397 648 aaKnown RBP9.53□□□□□ -0.88
TCF4-260ENST00000627685 C20orf194Q5TEA3 1177 aa9.53□□□□□ -0.88
TCF4-260ENST00000627685 KRT26Q7Z3Y9 468 aa9.53□□□□□ -0.88
TCF4-260ENST00000627685 ZNF804AQ7Z570 1209 aa9.53□□□□□ -0.88
TCF4-260ENST00000627685 SIRT2Q8IXJ6 389 aa9.53□□□□□ -0.88
TCF4-260ENST00000627685 PROCA1Q8NCQ7 364 aaPredicted RBP9.53□□□□□ -0.88
TCF4-260ENST00000627685 IL27Q8NEV9 243 aa9.53□□□□□ -0.88
TCF4-260ENST00000627685 SSH3Q8TE77 659 aa9.53□□□□□ -0.88
TCF4-260ENST00000627685 PRMT6Q96LA8 375 aaPredicted RBP9.53□□□□□ -0.88
TCF4-260ENST00000627685 SIL1Q9H173 461 aa9.53□□□□□ -0.88
TCF4-260ENST00000627685 ABT1Q9ULW3 272 aaKnown RBP9.53□□□□□ -0.88
TCF4-260ENST00000627685 IQSEC3Q9UPP2 1182 aaPredicted RBP9.53□□□□□ -0.88
TCF4-260ENST00000627685 OTOFQ9HC10 1997 aa9.53□□□□□ -0.88
TCF4-260ENST00000627685 WDR33Q9C0J8 1336 aaKnown RBP9.53□□□□□ -0.88
TCF4-260ENST00000627685 GNAI3P08754 354 aa9.52□□□□□ -0.89
TCF4-260ENST00000627685 MAP2K2P36507 400 aa9.52□□□□□ -0.89
TCF4-260ENST00000627685 KCNJ4P48050 445 aa9.52□□□□□ -0.89
TCF4-260ENST00000627685 MAP2K1Q02750 393 aaPredicted RBP9.52□□□□□ -0.89
TCF4-260ENST00000627685 TAF7LQ5H9L4 462 aa9.52□□□□□ -0.89
TCF4-260ENST00000627685 PRAMEF18Q5VWM3 479 aa9.52□□□□□ -0.89
TCF4-260ENST00000627685 CYP4F22Q6NT55 531 aa9.52□□□□□ -0.89
TCF4-260ENST00000627685 MOB2Q70IA6 237 aa9.52□□□□□ -0.89
TCF4-260ENST00000627685 DZIP1LQ8IYY4 767 aaKnown RBP9.52□□□□□ -0.89
TCF4-260ENST00000627685 DCPSQ96C86 337 aaKnown RBP9.52□□□□□ -0.89
TCF4-260ENST00000627685 TEPSINQ96N21 525 aa9.52□□□□□ -0.89
TCF4-260ENST00000627685 ATRNL1Q5VV63 1379 aa9.51□□□□□ -0.89
TCF4-260ENST00000627685 FOXN1O15353 648 aa9.51□□□□□ -0.89
TCF4-260ENST00000627685 IPO8O15397 1037 aaKnown RBP9.51□□□□□ -0.89
TCF4-260ENST00000627685 SRGAP3O43295 1099 aa9.51□□□□□ -0.89
TCF4-260ENST00000627685 GNAI2P04899 355 aa9.51□□□□□ -0.89
TCF4-260ENST00000627685 PRKCSHP14314 528 aaPredicted RBP9.51□□□□□ -0.89
TCF4-260ENST00000627685 IL15P40933 162 aaPredicted RBP9.51□□□□□ -0.89
TCF4-260ENST00000627685 TFCP2Q12800 502 aa9.51□□□□□ -0.89
TCF4-260ENST00000627685 MFSD14BQ5SR56 506 aa9.51□□□□□ -0.89
TCF4-260ENST00000627685 CEP85Q6P2H3 762 aa9.51□□□□□ -0.89
TCF4-260ENST00000627685 LPIN2Q92539 896 aa9.51□□□□□ -0.89
TCF4-260ENST00000627685 CAPNS2Q96L46 248 aa9.51□□□□□ -0.89
TCF4-260ENST00000627685 UNC93B1Q9H1C4 597 aa9.51□□□□□ -0.89
TCF4-260ENST00000627685 PRDM10Q9NQV6 1147 aa9.51□□□□□ -0.89
TCF4-260ENST00000627685 FZD1Q9UP38 647 aa9.51□□□□□ -0.89
TCF4-260ENST00000627685 SALL1Q9NSC2 1324 aa9.51□□□□□ -0.89
TCF4-260ENST00000627685 MAST2Q6P0Q8 1798 aa9.5□□□□□ -0.89
TCF4-260ENST00000627685 FAM187AA6NFU0 413 aa9.5□□□□□ -0.89
TCF4-260ENST00000627685 WNT7AO00755 349 aa9.5□□□□□ -0.89
TCF4-260ENST00000627685 AOC2O75106 756 aa9.5□□□□□ -0.89
TCF4-260ENST00000627685 PRDX5P30044 214 aa9.5□□□□□ -0.89
TCF4-260ENST00000627685 SKOR1P84550 965 aa9.5□□□□□ -0.89
TCF4-260ENST00000627685 RASGRF1Q13972 1273 aa9.5□□□□□ -0.89
TCF4-260ENST00000627685 ATP2B3Q16720 1220 aa9.5□□□□□ -0.89
TCF4-260ENST00000627685 CFAP100Q494V2 611 aa9.5□□□□□ -0.89
TCF4-260ENST00000627685 PKDCCQ504Y2 493 aa9.5□□□□□ -0.89
TCF4-260ENST00000627685 COL13A1Q5TAT6 717 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms