RNA–Protein interactions for RNA: ENST00000626466.1

TCF4-253, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-253ENST00000626466 PI16Q6UXB8 463 aa13.19□□□□□ -0.3
TCF4-253ENST00000626466 DZIP1Q86YF9 867 aaKnown RBP13.19□□□□□ -0.3
TCF4-253ENST00000626466 GNL3LQ9NVN8 582 aaKnown RBP13.19□□□□□ -0.3
TCF4-253ENST00000626466 ABCF2Q9UG63 623 aa13.19□□□□□ -0.3
TCF4-253ENST00000626466 MYH2Q9UKX2 1941 aa13.19□□□□□ -0.3
TCF4-253ENST00000626466 MROH7-TTC4A0A0A0MT08 1334 aa13.18□□□□□ -0.3
TCF4-253ENST00000626466 LOC285556D6RIA3 1793 aa13.18□□□□□ -0.3
TCF4-253ENST00000626466 SEMA3EO15041 775 aa13.18□□□□□ -0.3
TCF4-253ENST00000626466 TIMM10P62072 90 aa13.18□□□□□ -0.3
TCF4-253ENST00000626466 SPP2Q13103 211 aa13.18□□□□□ -0.3
TCF4-253ENST00000626466 FAM110CQ1W6H9 321 aa13.18□□□□□ -0.3
TCF4-253ENST00000626466 SHROOM1Q2M3G4 852 aaPredicted RBP13.18□□□□□ -0.3
TCF4-253ENST00000626466 COA7Q96BR5 231 aa13.18□□□□□ -0.3
TCF4-253ENST00000626466 GJD2Q9UKL4 321 aa13.18□□□□□ -0.3
TCF4-253ENST00000626466 DDX60LQ5H9U9 1706 aaKnown RBP13.17□□□□□ -0.3
TCF4-253ENST00000626466 ANP32CO43423 234 aa13.17□□□□□ -0.3
TCF4-253ENST00000626466 UBTFL1P0CB47 393 aaPredicted RBP13.17□□□□□ -0.3
TCF4-253ENST00000626466 MAGEA10P43363 369 aaPredicted RBP13.17□□□□□ -0.3
TCF4-253ENST00000626466 HMGCS2P54868 508 aa13.17□□□□□ -0.3
TCF4-253ENST00000626466 JAG1P78504 1218 aa13.17□□□□□ -0.3
TCF4-253ENST00000626466 MECOMQ03112 1051 aa13.17□□□□□ -0.3
TCF4-253ENST00000626466 NECAB2Q7Z6G3 386 aa13.17□□□□□ -0.3
TCF4-253ENST00000626466 TRIB2Q92519 343 aa13.17□□□□□ -0.3
TCF4-253ENST00000626466 FAM163AQ96GL9 167 aaPredicted RBP13.17□□□□□ -0.3
TCF4-253ENST00000626466 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.17□□□□□ -0.3
TCF4-253ENST00000626466 PLXNB2O15031 1838 aa13.17□□□□□ -0.3
TCF4-253ENST00000626466 GPR75-ASB3A0A0A6YYF3 556 aa13.16□□□□□ -0.3
TCF4-253ENST00000626466 HMGCRP04035 888 aa13.16□□□□□ -0.3
TCF4-253ENST00000626466 IL15P40933 162 aaPredicted RBP13.16□□□□□ -0.3
TCF4-253ENST00000626466 TBC1D9Q6ZT07 1266 aa13.16□□□□□ -0.3
TCF4-253ENST00000626466 MEIS3Q99687 375 aa13.16□□□□□ -0.3
TCF4-253ENST00000626466 ASCC2Q9H1I8 757 aaPredicted RBP13.16□□□□□ -0.3
TCF4-253ENST00000626466 PFASO15067 1338 aa13.15□□□□□ -0.3
TCF4-253ENST00000626466 DOCK3Q8IZD9 2030 aa13.15□□□□□ -0.3
TCF4-253ENST00000626466 BMP8BP34820 402 aa13.15□□□□□ -0.3
TCF4-253ENST00000626466 TFCP2Q12800 502 aa13.15□□□□□ -0.3
TCF4-253ENST00000626466 DEFB123Q8N688 67 aa13.15□□□□□ -0.3
TCF4-253ENST00000626466 PROCA1Q8NCQ7 364 aaPredicted RBP13.15□□□□□ -0.3
TCF4-253ENST00000626466 ZNF280CQ8ND82 737 aa13.15□□□□□ -0.3
TCF4-253ENST00000626466 CDCA7LQ96GN5 454 aa13.15□□□□□ -0.3
TCF4-253ENST00000626466 XAGE2Q96GT9 111 aa13.15□□□□□ -0.3
TCF4-253ENST00000626466 TXNRD2Q9NNW7 524 aa13.15□□□□□ -0.3
TCF4-253ENST00000626466 SMC4Q9NTJ3 1288 aa13.15□□□□□ -0.3
TCF4-253ENST00000626466 PDS5AQ29RF7 1337 aaKnown RBP13.14□□□□□ -0.31
TCF4-253ENST00000626466 SIPA1L1O43166 1804 aa13.14□□□□□ -0.31
TCF4-253ENST00000626466 A0A1B0GUL7 405 aa13.14□□□□□ -0.31
TCF4-253ENST00000626466 TBC1D12O60347 775 aa13.14□□□□□ -0.31
TCF4-253ENST00000626466 CAP2P40123 477 aa13.14□□□□□ -0.31
TCF4-253ENST00000626466 SLFN5Q08AF3 891 aa13.14□□□□□ -0.31
TCF4-253ENST00000626466 POTEEQ6S8J3 1075 aa13.14□□□□□ -0.31
TCF4-253ENST00000626466 ZGPATQ8N5A5 531 aaKnown RBP13.14□□□□□ -0.31
TCF4-253ENST00000626466 NBPF3Q9H094 633 aa13.14□□□□□ -0.31
TCF4-253ENST00000626466 OSBPL5Q9H0X9 879 aaPredicted RBP13.14□□□□□ -0.31
TCF4-253ENST00000626466 C11orf49Q9H6J7 331 aa13.14□□□□□ -0.31
TCF4-253ENST00000626466 HMX1Q9NP08 348 aaPredicted RBP13.14□□□□□ -0.31
TCF4-253ENST00000626466 COPRSQ9NQ92 184 aa13.14□□□□□ -0.31
TCF4-253ENST00000626466 HMG20BQ9P0W2 317 aa13.14□□□□□ -0.31
TCF4-253ENST00000626466 PNMA3Q9UL41 463 aa13.14□□□□□ -0.31
TCF4-253ENST00000626466 RPTORQ8N122 1335 aa13.13□□□□□ -0.31
TCF4-253ENST00000626466 COL2A1P02458 1487 aaPredicted RBP13.13□□□□□ -0.31
TCF4-253ENST00000626466 E9PSI1 815 aa13.13□□□□□ -0.31
TCF4-253ENST00000626466 CYP2B6P20813 491 aa13.13□□□□□ -0.31
TCF4-253ENST00000626466 GCLCP48506 637 aaPredicted RBP13.13□□□□□ -0.31
TCF4-253ENST00000626466 MTMR2Q13614 643 aa13.13□□□□□ -0.31
TCF4-253ENST00000626466 SH3D19Q5HYK7 790 aa13.13□□□□□ -0.31
TCF4-253ENST00000626466 MAP3K21Q5TCX8 1036 aa13.13□□□□□ -0.31
TCF4-253ENST00000626466 ERICH6Q7L0X2 663 aa13.13□□□□□ -0.31
TCF4-253ENST00000626466 ANKLE1Q8NAG6 615 aa13.13□□□□□ -0.31
TCF4-253ENST00000626466 NSUN4Q96CB9 384 aaKnown RBP13.13□□□□□ -0.31
TCF4-253ENST00000626466 DNAJC18Q9H819 358 aa13.13□□□□□ -0.31
TCF4-253ENST00000626466 MTMR10Q9NXD2 777 aa13.13□□□□□ -0.31
TCF4-253ENST00000626466 MORF4L1Q9UBU8 362 aa13.13□□□□□ -0.31
TCF4-253ENST00000626466 OGDHLQ9ULD0 1010 aa13.13□□□□□ -0.31
TCF4-253ENST00000626466 NOB1Q9ULX3 412 aaKnown RBP13.13□□□□□ -0.31
TCF4-253ENST00000626466 ATAD5Q96QE3 1844 aa13.12□□□□□ -0.31
TCF4-253ENST00000626466 PRKAR2AP13861 404 aaKnown RBP13.12□□□□□ -0.31
TCF4-253ENST00000626466 CCL14Q16627 93 aa13.12□□□□□ -0.31
TCF4-253ENST00000626466 SLF2Q8IX21 1173 aa13.12□□□□□ -0.31
TCF4-253ENST00000626466 SH3RF3Q8TEJ3 882 aaPredicted RBP13.12□□□□□ -0.31
TCF4-253ENST00000626466 P2RX7Q99572 595 aaKnown RBP13.12□□□□□ -0.31
TCF4-253ENST00000626466 USP17L5A8MUK1 530 aa13.11□□□□□ -0.31
TCF4-253ENST00000626466 CCND3P30281 292 aaPredicted RBP13.11□□□□□ -0.31
TCF4-253ENST00000626466 LRRC26Q2I0M4 334 aa13.11□□□□□ -0.31
TCF4-253ENST00000626466 LRIT3Q3SXY7 679 aa13.11□□□□□ -0.31
TCF4-253ENST00000626466 ALDH1L2Q3SY69 923 aa13.11□□□□□ -0.31
TCF4-253ENST00000626466 SPTY2D1Q68D10 685 aaPredicted RBP13.11□□□□□ -0.31
TCF4-253ENST00000626466 TDHQ8IZJ6 230 aa13.11□□□□□ -0.31
TCF4-253ENST00000626466 PORCNQ9H237 461 aa13.11□□□□□ -0.31
TCF4-253ENST00000626466 STXBP5LQ9Y2K9 1186 aa13.11□□□□□ -0.31
TCF4-253ENST00000626466 COL6A3P12111 3177 aa13.11□□□□□ -0.31
TCF4-253ENST00000626466 LAMA3Q16787 3333 aa13.11□□□□□ -0.31
TCF4-253ENST00000626466 COL6A1P12109 1028 aa13.1□□□□□ -0.31
TCF4-253ENST00000626466 CAPN2P17655 700 aa13.1□□□□□ -0.31
TCF4-253ENST00000626466 MCAMP43121 646 aa13.1□□□□□ -0.31
TCF4-253ENST00000626466 CACNB2Q08289 660 aaPredicted RBP13.1□□□□□ -0.31
TCF4-253ENST00000626466 MVPQ14764 893 aaKnown RBP13.1□□□□□ -0.31
TCF4-253ENST00000626466 Q3C1V9 767 aa13.1□□□□□ -0.31
TCF4-253ENST00000626466 TEX11Q8IYF3 940 aa13.1□□□□□ -0.31
TCF4-253ENST00000626466 SPATA5Q8NB90 893 aa13.1□□□□□ -0.31
TCF4-253ENST00000626466 UBE2OQ9C0C9 1292 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms