RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 KAT6BQ8WYB5 2073 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 A0A1B0GVL5 298 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 SPTLC2O15270 562 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 FANCGO15287 622 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 CYP27B1O15528 508 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 PPP6R2O75170 966 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 ERLIN1O75477 346 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 EIF3JO75822 258 aaKnown RBP4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 SLC34A2O95436 690 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 TOP1P11387 765 aaKnown RBP4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 GUCY2CP25092 1073 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 NDUFA8P51970 172 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 STK38Q15208 465 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 BEND6Q5SZJ8 279 aaPredicted RBP4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 GORABQ5T7V8 394 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 LMOD2Q6P5Q4 547 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 LRP10Q7Z4F1 713 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 SRGAP1Q7Z6B7 1085 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 SUGP1Q8IWZ8 645 aaKnown RBP4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 C10orf67Q8IYJ2 551 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 LINS1Q8NG48 757 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 DDX27Q96GQ7 796 aaKnown RBP4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 CARD10Q9BWT7 1032 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 CCDC8Q9H0W5 538 aaPredicted RBP4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 ZCCHC17Q9NP64 241 aaKnown RBP4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 COPRSQ9NQ92 184 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 DDX21Q9NR30 783 aaKnown RBP eCLIP4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 HELLSQ9NRZ9 838 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 NLRP2Q9NX02 1062 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 SLAIN2Q9P270 581 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 PA2G4Q9UQ80 394 aaKnown RBP4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 TAF6LQ9Y6J9 622 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 BTAF1O14981 1849 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 CARMIL3Q8ND23 1372 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 PALLDQ8WX93 1383 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 KIAA1551Q9HCM1 1747 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 MAP3K15Q6ZN16 1313 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 GRM8O00222 908 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 MMP14P50281 582 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 MYL5Q02045 173 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 CEBPZQ03701 1054 aaKnown RBP4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 PDIA6Q15084 440 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 SF3A1Q15459 793 aaKnown RBP4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 CT47A1Q5JQC4 288 aaPredicted RBP4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 AXDND1Q5T1B0 1012 aaPredicted RBP4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 SWT1Q5T5J6 900 aaKnown RBP4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 ZNF790Q6PG37 636 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 FAM71BQ8TC56 605 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 KAZALD1Q96I82 304 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 TRERF1Q96PN7 1200 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 NAA15Q9BXJ9 866 aaKnown RBP4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 ACBD3Q9H3P7 528 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 L1RE1Q9UN81 338 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 HPSEQ9Y251 543 aa4.78□□□□□ -1.64
PTP4A1-205ENST00000626021 MYH8P13535 1937 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 C2orf72A6NCS6 295 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 H3BQF6 201 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 ZNF609O15014 1411 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 CUTAO60888 179 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 FDPSP14324 419 aaKnown RBP4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 EIF2S2P20042 333 aaKnown RBP4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 PDIA3P30101 505 aaKnown RBP4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 LMAN1P49257 510 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 GTF2A1P52655 376 aaPredicted RBP4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 CORO7P57737 925 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 GNG11P61952 73 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 PROSER3Q2NL68 480 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 PPP1R15BQ5SWA1 713 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 MYSM1Q5VVJ2 828 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 OLFM4Q6UX06 510 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 CABLES1Q8TDN4 633 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 DPF2Q92785 391 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 ERCC4Q92889 916 aaPredicted RBP4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 SUCLG2Q96I99 432 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 HAUS7Q99871 368 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 BAG1Q99933 345 aaPredicted RBP4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 FAM107BQ9H098 131 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 VIPAS39Q9H9C1 493 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 MED4Q9NPJ6 270 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 LCMT1Q9UIC8 334 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 CDC23Q9UJX2 597 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 MAP3K2Q9Y2U5 619 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 ECM29Q5VYK3 1845 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 A0A087WUV0 522 aaPredicted RBP4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 ERVV-2B6SEH9 535 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 TRIM66O15016 1216 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 DDX58O95786 925 aaKnown RBP4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 SERPINC1P01008 464 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 LMOD1P29536 600 aaPredicted RBP4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 SLC39A14Q15043 492 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 CHRNA2Q15822 529 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 CFAP100Q494V2 611 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 TTC31Q49AM3 519 aaPredicted RBP4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 ANO1Q5XXA6 986 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 SYNE3Q6ZMZ3 975 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 STOX1Q6ZVD7 989 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 RPAINQ86UA6 219 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 TC2NQ8N9U0 490 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 ENOX1Q8TC92 643 aaKnown RBP4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 PPM1EQ8WY54 764 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms