RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 TLR2O60603 784 aa15.32■□□□□ 0.04
PNKP-217ENST00000625216 IDH1O75874 414 aaKnown RBP15.32■□□□□ 0.04
PNKP-217ENST00000625216 PTPRAP18433 802 aa15.32■□□□□ 0.04
PNKP-217ENST00000625216 CYP7A1P22680 504 aa15.32■□□□□ 0.04
PNKP-217ENST00000625216 FASTKD5Q7L8L6 764 aaKnown RBP15.32■□□□□ 0.04
PNKP-217ENST00000625216 OTOP1Q7RTM1 612 aa15.32■□□□□ 0.04
PNKP-217ENST00000625216 LRRCC1Q9C099 1032 aa15.32■□□□□ 0.04
PNKP-217ENST00000625216 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.32■□□□□ 0.04
PNKP-217ENST00000625216 TRIM17Q9Y577 477 aa15.32■□□□□ 0.04
PNKP-217ENST00000625216 ZHX2Q9Y6X8 837 aa15.32■□□□□ 0.04
PNKP-217ENST00000625216 OTOFQ9HC10 1997 aa15.32■□□□□ 0.04
PNKP-217ENST00000625216 LAMB1P07942 1786 aa15.31■□□□□ 0.04
PNKP-217ENST00000625216 FOXP4Q8IVH2 680 aaPredicted RBP15.31■□□□□ 0.04
PNKP-217ENST00000625216 OTUD7AQ8TE49 926 aaPredicted RBP15.31■□□□□ 0.04
PNKP-217ENST00000625216 TBC1D2Q9BYX2 928 aa15.31■□□□□ 0.04
PNKP-217ENST00000625216 EFCC1Q9HA90 598 aa15.31■□□□□ 0.04
PNKP-217ENST00000625216 AFG3L2Q9Y4W6 797 aa15.31■□□□□ 0.04
PNKP-217ENST00000625216 MOGSQ13724 837 aa15.3■□□□□ 0.04
PNKP-217ENST00000625216 AK9Q5TCS8 1911 aa15.3■□□□□ 0.04
PNKP-217ENST00000625216 ADGRA1Q86SQ6 560 aa15.3■□□□□ 0.04
PNKP-217ENST00000625216 CD99L2Q8TCZ2 262 aa15.3■□□□□ 0.04
PNKP-217ENST00000625216 TGFBRAP1Q8WUH2 860 aa15.3■□□□□ 0.04
PNKP-217ENST00000625216 SALL3Q9BXA9 1300 aa15.3■□□□□ 0.04
PNKP-217ENST00000625216 A0A0G2JLL6 359 aaPredicted RBP15.29■□□□□ 0.04
PNKP-217ENST00000625216 PDHXO00330 501 aa15.29■□□□□ 0.04
PNKP-217ENST00000625216 MLLT1Q03111 559 aaPredicted RBP15.29■□□□□ 0.04
PNKP-217ENST00000625216 KIF22Q14807 665 aa15.29■□□□□ 0.04
PNKP-217ENST00000625216 C17orf99Q6UX52 265 aa15.29■□□□□ 0.04
PNKP-217ENST00000625216 PRRT2Q7Z6L0 340 aaPredicted RBP15.29■□□□□ 0.04
PNKP-217ENST00000625216 METTL16Q86W50 562 aaKnown RBP15.29■□□□□ 0.04
PNKP-217ENST00000625216 MAPKAPK5Q8IW41 473 aa15.29■□□□□ 0.04
PNKP-217ENST00000625216 MAGEB6Q8N7X4 407 aa15.29■□□□□ 0.04
PNKP-217ENST00000625216 ANTXR1Q9H6X2 564 aa15.29■□□□□ 0.04
PNKP-217ENST00000625216 PTPN22Q9Y2R2 807 aa15.29■□□□□ 0.04
PNKP-217ENST00000625216 FLT1P17948 1338 aa15.28■□□□□ 0.04
PNKP-217ENST00000625216 GNRH1P01148 92 aa15.28■□□□□ 0.04
PNKP-217ENST00000625216 CAP2P40123 477 aa15.28■□□□□ 0.04
PNKP-217ENST00000625216 GPAT2Q6NUI2 795 aa15.28■□□□□ 0.04
PNKP-217ENST00000625216 PLEKHM2Q8IWE5 1019 aa15.28■□□□□ 0.04
PNKP-217ENST00000625216 BCL11AQ9H165 835 aa15.28■□□□□ 0.04
PNKP-217ENST00000625216 GINM1Q9NU53 330 aa15.28■□□□□ 0.04
PNKP-217ENST00000625216 ZBTB47Q9UFB7 747 aaPredicted RBP15.28■□□□□ 0.04
PNKP-217ENST00000625216 SLC45A1Q9Y2W3 748 aa15.28■□□□□ 0.04
PNKP-217ENST00000625216 HLA-DOAP06340 250 aa15.27■□□□□ 0.04
PNKP-217ENST00000625216 SLURP2P0DP57 97 aa15.27■□□□□ 0.04
PNKP-217ENST00000625216 ATP5JP18859 108 aa15.27■□□□□ 0.04
PNKP-217ENST00000625216 DYNLL1P63167 89 aaKnown RBP15.27■□□□□ 0.04
PNKP-217ENST00000625216 PARK7Q99497 189 aaKnown RBP15.27■□□□□ 0.04
PNKP-217ENST00000625216 TRIM34Q9BYJ4 488 aa15.27■□□□□ 0.04
PNKP-217ENST00000625216 NDUFB9Q9Y6M9 179 aa15.27■□□□□ 0.04
PNKP-217ENST00000625216 FAM196BA6NMK8 535 aa15.26■□□□□ 0.03
PNKP-217ENST00000625216 USP17L5A8MUK1 530 aa15.26■□□□□ 0.03
PNKP-217ENST00000625216 PRMT2P55345 433 aa15.26■□□□□ 0.03
PNKP-217ENST00000625216 LACTBP83111 547 aaPredicted RBP15.26■□□□□ 0.03
PNKP-217ENST00000625216 SLC9C2Q5TAH2 1124 aa15.26■□□□□ 0.03
PNKP-217ENST00000625216 CRACR2BQ8N4Y2 399 aaPredicted RBP15.26■□□□□ 0.03
PNKP-217ENST00000625216 MIGA1Q8NAN2 632 aa15.26■□□□□ 0.03
PNKP-217ENST00000625216 AS3MTQ9HBK9 375 aa15.26■□□□□ 0.03
PNKP-217ENST00000625216 PALD1Q9ULE6 856 aa15.26■□□□□ 0.03
PNKP-217ENST00000625216 TRIM75PA6NK02 468 aa15.25■□□□□ 0.03
PNKP-217ENST00000625216 GOLIM4O00461 696 aa15.25■□□□□ 0.03
PNKP-217ENST00000625216 ASNSP08243 561 aa15.25■□□□□ 0.03
PNKP-217ENST00000625216 USP5P45974 858 aa15.25■□□□□ 0.03
PNKP-217ENST00000625216 GADL1Q6ZQY3 521 aa15.25■□□□□ 0.03
PNKP-217ENST00000625216 TTC6Q86TZ1 520 aa15.25■□□□□ 0.03
PNKP-217ENST00000625216 PROCA1Q8NCQ7 364 aaPredicted RBP15.25■□□□□ 0.03
PNKP-217ENST00000625216 ZNF280CQ8ND82 737 aa15.25■□□□□ 0.03
PNKP-217ENST00000625216 DNAJC2Q99543 621 aaKnown RBP15.25■□□□□ 0.03
PNKP-217ENST00000625216 MAGEB6P1A0A0J9YX57 407 aa15.24■□□□□ 0.03
PNKP-217ENST00000625216 PDE6AP16499 860 aa15.24■□□□□ 0.03
PNKP-217ENST00000625216 HOXD10P28358 340 aa15.24■□□□□ 0.03
PNKP-217ENST00000625216 SOX10P56693 466 aa15.24■□□□□ 0.03
PNKP-217ENST00000625216 SPP2Q13103 211 aa15.24■□□□□ 0.03
PNKP-217ENST00000625216 HAUS7Q99871 368 aa15.24■□□□□ 0.03
PNKP-217ENST00000625216 RIOK1Q9BRS2 568 aaKnown RBP15.24■□□□□ 0.03
PNKP-217ENST00000625216 WDR18Q9BV38 432 aa15.24■□□□□ 0.03
PNKP-217ENST00000625216 BOLA2Q9H3K6 86 aa15.24■□□□□ 0.03
PNKP-217ENST00000625216 PAG1Q9NWQ8 432 aa15.24■□□□□ 0.03
PNKP-217ENST00000625216 CPA4Q9UI42 421 aa15.24■□□□□ 0.03
PNKP-217ENST00000625216 AGTPBP1Q9UPW5 1226 aa15.24■□□□□ 0.03
PNKP-217ENST00000625216 ADGRA2Q96PE1 1338 aa15.23■□□□□ 0.03
PNKP-217ENST00000625216 DOCK2Q92608 1830 aa15.23■□□□□ 0.03
PNKP-217ENST00000625216 GSPT1P15170 499 aaKnown RBP15.23■□□□□ 0.03
PNKP-217ENST00000625216 MX1P20591 662 aa15.23■□□□□ 0.03
PNKP-217ENST00000625216 PDE1AP54750 535 aa15.23■□□□□ 0.03
PNKP-217ENST00000625216 CAP1Q01518 475 aa15.23■□□□□ 0.03
PNKP-217ENST00000625216 PABPC4Q13310 644 aaKnown RBP eCLIP15.23■□□□□ 0.03
PNKP-217ENST00000625216 RRP1BQ14684 758 aaKnown RBP15.23■□□□□ 0.03
PNKP-217ENST00000625216 SH3D19Q5HYK7 790 aa15.23■□□□□ 0.03
PNKP-217ENST00000625216 TTC22Q5TAA0 569 aa15.23■□□□□ 0.03
PNKP-217ENST00000625216 TSHZ3Q63HK5 1081 aa15.23■□□□□ 0.03
PNKP-217ENST00000625216 NBPF11Q86T75 865 aa15.23■□□□□ 0.03
PNKP-217ENST00000625216 ARMC5Q96C12 935 aa15.23■□□□□ 0.03
PNKP-217ENST00000625216 CRNKL1Q9BZJ0 848 aaKnown RBP15.23■□□□□ 0.03
PNKP-217ENST00000625216 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.23■□□□□ 0.032e-9■■■□□ 18.5
PNKP-217ENST00000625216 EHD4Q9H223 541 aa15.23■□□□□ 0.03
PNKP-217ENST00000625216 SAP30BPQ9UHR5 308 aaKnown RBP15.23■□□□□ 0.03
PNKP-217ENST00000625216 ZNF532Q9HCE3 1301 aa15.22■□□□□ 0.03
PNKP-217ENST00000625216 MAST2Q6P0Q8 1798 aa15.22■□□□□ 0.03
PNKP-217ENST00000625216 TCRBV5S4A2TA0A5A2 114 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms