RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 DBNLQ9UJU6 430 aaKnown RBP13.3□□□□□ -0.28
ATRX-214ENST00000624166 PPP1R12BO60237 982 aaPredicted RBP13.29□□□□□ -0.28
ATRX-214ENST00000624166 TSGA10IPQ3SY00 556 aa13.29□□□□□ -0.28
ATRX-214ENST00000624166 CEP57Q86XR8 500 aa13.29□□□□□ -0.28
ATRX-214ENST00000624166 ANKS4BQ8N8V4 417 aa13.29□□□□□ -0.28
ATRX-214ENST00000624166 ENOX1Q8TC92 643 aaKnown RBP13.29□□□□□ -0.28
ATRX-214ENST00000624166 SECISBP2LQ93073 1101 aaKnown RBP13.29□□□□□ -0.28
ATRX-214ENST00000624166 CCDC113Q9H0I3 377 aa13.29□□□□□ -0.28
ATRX-214ENST00000624166 MMRN2Q9H8L6 949 aa13.29□□□□□ -0.28
ATRX-214ENST00000624166 FAN1Q9Y2M0 1017 aa13.29□□□□□ -0.28
ATRX-214ENST00000624166 ZMYM6O95789 1325 aa13.29□□□□□ -0.28
ATRX-214ENST00000624166 A0A087WUV0 522 aaPredicted RBP13.29□□□□□ -0.28
ATRX-214ENST00000624166 MACROD2A1Z1Q3 448 aa13.29□□□□□ -0.28
ATRX-214ENST00000624166 VWA3AA6NCI4 1184 aa13.29□□□□□ -0.28
ATRX-214ENST00000624166 MAP2K2P36507 400 aa13.29□□□□□ -0.28
ATRX-214ENST00000624166 NYAP1Q6ZVC0 841 aa13.29□□□□□ -0.28
ATRX-214ENST00000624166 SND1Q7KZF4 910 aaKnown RBP eCLIP13.29□□□□□ -0.28
ATRX-214ENST00000624166 ANKRD18AQ8IVF6 992 aa13.29□□□□□ -0.28
ATRX-214ENST00000624166 FMR1NBQ8N0W7 255 aaPredicted RBP13.29□□□□□ -0.28
ATRX-214ENST00000624166 FAM204AQ9H8W3 233 aa13.29□□□□□ -0.28
ATRX-214ENST00000624166 PRDM11Q9NQV5 511 aa13.29□□□□□ -0.28
ATRX-214ENST00000624166 TLR7Q9NYK1 1049 aaKnown RBP13.29□□□□□ -0.28
ATRX-214ENST00000624166 USP42Q9H9J4 1324 aaKnown RBP13.29□□□□□ -0.28
ATRX-214ENST00000624166 MSL1Q68DK7 614 aa13.29□□□□□ -0.28
ATRX-214ENST00000624166 DHX40Q8IX18 779 aaKnown RBP13.29□□□□□ -0.28
ATRX-214ENST00000624166 IFT20Q8IY31 132 aa13.29□□□□□ -0.28
ATRX-214ENST00000624166 CCDC43Q96MW1 224 aaKnown RBP13.29□□□□□ -0.28
ATRX-214ENST00000624166 PLCD4Q9BRC7 762 aa13.29□□□□□ -0.28
ATRX-214ENST00000624166 NSRP1Q9H0G5 558 aaKnown RBP13.29□□□□□ -0.28
ATRX-214ENST00000624166 SH3TC1Q8TE82 1336 aa13.28□□□□□ -0.28
ATRX-214ENST00000624166 GOLGA8KD6RF30 607 aa13.28□□□□□ -0.28
ATRX-214ENST00000624166 ZMYM1Q5SVZ6 1142 aa13.28□□□□□ -0.28
ATRX-214ENST00000624166 CCDC50Q8IVM0 306 aa13.28□□□□□ -0.28
ATRX-214ENST00000624166 GOPCQ9HD26 462 aa13.28□□□□□ -0.28
ATRX-214ENST00000624166 RBM28Q9NW13 759 aaKnown RBP13.28□□□□□ -0.28
ATRX-214ENST00000624166 TMOD3Q9NYL9 352 aa13.28□□□□□ -0.28
ATRX-214ENST00000624166 ASIC1P78348 528 aa13.28□□□□□ -0.28
ATRX-214ENST00000624166 KIF23Q02241 960 aaPredicted RBP13.28□□□□□ -0.28
ATRX-214ENST00000624166 IFT81Q8WYA0 676 aa13.28□□□□□ -0.28
ATRX-214ENST00000624166 MKNK2Q9HBH9 465 aa13.28□□□□□ -0.28
ATRX-214ENST00000624166 TAB2Q9NYJ8 693 aa13.28□□□□□ -0.28
ATRX-214ENST00000624166 TBX22Q9Y458 520 aa13.28□□□□□ -0.28
ATRX-214ENST00000624166 JRKLQ9Y4A0 524 aa13.28□□□□□ -0.28
ATRX-214ENST00000624166 SASH1O94885 1247 aa13.28□□□□□ -0.28
ATRX-214ENST00000624166 MAGEA9P43362 315 aa13.28□□□□□ -0.28
ATRX-214ENST00000624166 GNAQP50148 359 aa13.28□□□□□ -0.28
ATRX-214ENST00000624166 PDE4BQ07343 736 aa13.28□□□□□ -0.28
ATRX-214ENST00000624166 DCAF5Q96JK2 942 aa13.28□□□□□ -0.28
ATRX-214ENST00000624166 A0A1B0GUA9 196 aa13.27□□□□□ -0.28
ATRX-214ENST00000624166 KCNQ3O43525 872 aa13.27□□□□□ -0.28
ATRX-214ENST00000624166 ATP1A3P13637 1013 aa13.27□□□□□ -0.28
ATRX-214ENST00000624166 IQCDQ96DY2 449 aa13.27□□□□□ -0.28
ATRX-214ENST00000624166 XAGE2Q96GT9 111 aa13.27□□□□□ -0.28
ATRX-214ENST00000624166 PANX2Q96RD6 677 aa13.27□□□□□ -0.28
ATRX-214ENST00000624166 VIRMAQ69YN4 1812 aaKnown RBP13.27□□□□□ -0.28
ATRX-214ENST00000624166 TADA3O75528 432 aa13.27□□□□□ -0.28
ATRX-214ENST00000624166 CPLX4Q7Z7G2 160 aa13.27□□□□□ -0.28
ATRX-214ENST00000624166 SLC35F6Q8N357 371 aa13.27□□□□□ -0.28
ATRX-214ENST00000624166 BCAS4Q8TDM0 211 aa13.27□□□□□ -0.28
ATRX-214ENST00000624166 GOLPH3LQ9H4A5 285 aa13.27□□□□□ -0.28
ATRX-214ENST00000624166 KAT14Q9H8E8 782 aa13.27□□□□□ -0.28
ATRX-214ENST00000624166 SEPT11Q9NVA2 429 aaKnown RBP13.27□□□□□ -0.28
ATRX-214ENST00000624166 NBPF6Q5VWK0 638 aa13.27□□□□□ -0.29
ATRX-214ENST00000624166 DTHD1Q6ZMT9 781 aa13.27□□□□□ -0.29
ATRX-214ENST00000624166 SMARCC2Q8TAQ2 1214 aa13.27□□□□□ -0.29
ATRX-214ENST00000624166 NBPF4Q96M43 638 aa13.27□□□□□ -0.29
ATRX-214ENST00000624166 CAPS2Q9BXY5 557 aa13.27□□□□□ -0.29
ATRX-214ENST00000624166 GPR108Q9NPR9 543 aa13.27□□□□□ -0.29
ATRX-214ENST00000624166 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.27□□□□□ -0.29
ATRX-214ENST00000624166 NEO1Q92859 1461 aa13.27□□□□□ -0.29
ATRX-214ENST00000624166 TSPY2A6NKD2 308 aa13.27□□□□□ -0.29
ATRX-214ENST00000624166 SEPT7Q16181 437 aaKnown RBP13.27□□□□□ -0.29
ATRX-214ENST00000624166 E4F1Q66K89 784 aaPredicted RBP13.27□□□□□ -0.29
ATRX-214ENST00000624166 ATP2C2O75185 946 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 GPTP24298 496 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 ADD1P35611 737 aaKnown RBP13.26□□□□□ -0.29
ATRX-214ENST00000624166 PAK2Q13177 524 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 ZNF174Q15697 407 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 CCDC155Q8N6L0 562 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 CLIC6Q96NY7 704 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 ATP6V1AP38606 617 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 CASP8Q14790 479 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 ZFYVE27Q5T4F4 411 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 KRT28Q7Z3Y7 464 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 LMBR1Q8WVP7 490 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 TSKSQ9UJT2 592 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 EPN1Q9Y6I3 576 aaPredicted RBP13.26□□□□□ -0.29
ATRX-214ENST00000624166 ADGRB2O60241 1585 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 USP6P35125 1406 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 RNF40O75150 1001 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 PPFIA4O75335 1185 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 GCP02774 474 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 GNGT1P63211 74 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 NBPF14Q5TI25 921 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 ARMCX5Q6P1M9 558 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 TCEAL9Q9UHQ7 104 aa13.26□□□□□ -0.29
ATRX-214ENST00000624166 ZCCHC11Q5TAX3 1644 aaKnown RBP13.26□□□□□ -0.29
ATRX-214ENST00000624166 FGAP02671 866 aa13.25□□□□□ -0.29
ATRX-214ENST00000624166 GOLGA8FQ08AF8 430 aa13.25□□□□□ -0.29
ATRX-214ENST00000624166 GOLGA8DPQ0D2H9 430 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms