RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 NUDT12Q9BQG2 462 aa9.13□□□□□ -0.95
LINC00963-218ENST00000624138 DDTLA6NHG4 134 aaPredicted RBP9.12□□□□□ -0.95
LINC00963-218ENST00000624138 TBC1D12O60347 775 aa9.12□□□□□ -0.95
LINC00963-218ENST00000624138 VAMP4O75379 141 aa9.12□□□□□ -0.95
LINC00963-218ENST00000624138 SLURP2P0DP57 97 aa9.12□□□□□ -0.95
LINC00963-218ENST00000624138 FOSL2P15408 326 aa9.12□□□□□ -0.95
LINC00963-218ENST00000624138 CCND3P30281 292 aaPredicted RBP9.12□□□□□ -0.95
LINC00963-218ENST00000624138 HOXD11P31277 338 aaPredicted RBP9.12□□□□□ -0.95
LINC00963-218ENST00000624138 RGS3P49796 1198 aa9.12□□□□□ -0.95
LINC00963-218ENST00000624138 PABPC4Q13310 644 aaKnown RBP eCLIP9.12□□□□□ -0.95
LINC00963-218ENST00000624138 SH3D19Q5HYK7 790 aa9.12□□□□□ -0.95
LINC00963-218ENST00000624138 METTL24Q5JXM2 366 aa9.12□□□□□ -0.95
LINC00963-218ENST00000624138 FAM122AQ96E09 287 aa9.12□□□□□ -0.95
LINC00963-218ENST00000624138 SUCLG2Q96I99 432 aa9.12□□□□□ -0.95
LINC00963-218ENST00000624138 TBC1D2Q9BYX2 928 aa9.12□□□□□ -0.95
LINC00963-218ENST00000624138 ASCC2Q9H1I8 757 aaPredicted RBP9.12□□□□□ -0.95
LINC00963-218ENST00000624138 C9orf78Q9NZ63 289 aaPredicted RBP9.12□□□□□ -0.95
LINC00963-218ENST00000624138 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.12□□□□□ -0.95
LINC00963-218ENST00000624138 UTYO14607 1347 aa9.11□□□□□ -0.95
LINC00963-218ENST00000624138 TMEM265A0A087WTH1 108 aa9.11□□□□□ -0.95
LINC00963-218ENST00000624138 ALDH1L1O75891 902 aa9.11□□□□□ -0.95
LINC00963-218ENST00000624138 IFIT1P09914 478 aaKnown RBP9.11□□□□□ -0.95
LINC00963-218ENST00000624138 PRDX5P30044 214 aa9.11□□□□□ -0.95
LINC00963-218ENST00000624138 SPP2Q13103 211 aa9.11□□□□□ -0.95
LINC00963-218ENST00000624138 CCDC27Q2M243 656 aa9.11□□□□□ -0.95
LINC00963-218ENST00000624138 RABL6Q3YEC7 729 aaPredicted RBP9.11□□□□□ -0.95
LINC00963-218ENST00000624138 C9orf50Q5SZB4 431 aa9.11□□□□□ -0.95
LINC00963-218ENST00000624138 CCDC84Q86UT8 332 aaPredicted RBP9.11□□□□□ -0.95
LINC00963-218ENST00000624138 ZNF280CQ8ND82 737 aa9.11□□□□□ -0.95
LINC00963-218ENST00000624138 SOCS4Q8WXH5 440 aa9.11□□□□□ -0.95
LINC00963-218ENST00000624138 SENP6Q9GZR1 1112 aaPredicted RBP9.11□□□□□ -0.95
LINC00963-218ENST00000624138 IL16Q14005 1332 aa9.1□□□□□ -0.95
LINC00963-218ENST00000624138 SALL1Q9NSC2 1324 aa9.1□□□□□ -0.95
LINC00963-218ENST00000624138 ZBTB22O15209 634 aa9.1□□□□□ -0.95
LINC00963-218ENST00000624138 LDHBP07195 334 aaKnown RBP9.1□□□□□ -0.95
LINC00963-218ENST00000624138 ZKSCAN1P17029 563 aaPredicted RBP9.1□□□□□ -0.95
LINC00963-218ENST00000624138 HOXA7P31268 230 aaPredicted RBP9.1□□□□□ -0.95
LINC00963-218ENST00000624138 ZEB1P37275 1124 aaPredicted RBP9.1□□□□□ -0.95
LINC00963-218ENST00000624138 PUM3Q15397 648 aaKnown RBP9.1□□□□□ -0.95
LINC00963-218ENST00000624138 ZSCAN29Q8IWY8 852 aaPredicted RBP9.1□□□□□ -0.95
LINC00963-218ENST00000624138 USP38Q8NB14 1042 aa9.1□□□□□ -0.95
LINC00963-218ENST00000624138 OSBPL5Q9H0X9 879 aaPredicted RBP9.1□□□□□ -0.95
LINC00963-218ENST00000624138 PRKAG2Q9UGJ0 569 aa9.1□□□□□ -0.95
LINC00963-218ENST00000624138 BDP1A6H8Y1 2624 aa9.1□□□□□ -0.95
LINC00963-218ENST00000624138 GAKO14976 1311 aa9.09□□□□□ -0.95
LINC00963-218ENST00000624138 MYO5AQ9Y4I1 1855 aaKnown RBP9.09□□□□□ -0.95
LINC00963-218ENST00000624138 NBPF7P0C2Y1 421 aaPredicted RBP9.09□□□□□ -0.95
LINC00963-218ENST00000624138 MAPK4P31152 587 aa9.09□□□□□ -0.95
LINC00963-218ENST00000624138 HMGCS2P54868 508 aa9.09□□□□□ -0.95
LINC00963-218ENST00000624138 RTP1P59025 263 aa9.09□□□□□ -0.95
LINC00963-218ENST00000624138 CCL14Q16627 93 aa9.09□□□□□ -0.95
LINC00963-218ENST00000624138 Q3C1V9 767 aa9.09□□□□□ -0.95
LINC00963-218ENST00000624138 MORN1Q5T089 497 aa9.09□□□□□ -0.95
LINC00963-218ENST00000624138 WWC1Q8IX03 1113 aa9.09□□□□□ -0.95
LINC00963-218ENST00000624138 GPRC5AQ8NFJ5 357 aa9.09□□□□□ -0.95
LINC00963-218ENST00000624138 LPIN2Q92539 896 aa9.09□□□□□ -0.95
LINC00963-218ENST00000624138 FAM163AQ96GL9 167 aaPredicted RBP9.09□□□□□ -0.95
LINC00963-218ENST00000624138 P2RX7Q99572 595 aaKnown RBP9.09□□□□□ -0.95
LINC00963-218ENST00000624138 SRCIN1Q9C0H9 1055 aa9.09□□□□□ -0.95
LINC00963-218ENST00000624138 BICC1Q9H694 974 aaKnown RBP9.09□□□□□ -0.95
LINC00963-218ENST00000624138 TXNRD2Q9NNW7 524 aa9.09□□□□□ -0.95
LINC00963-218ENST00000624138 DDX4Q9NQI0 724 aaKnown RBP9.09□□□□□ -0.95
LINC00963-218ENST00000624138 MYH1P12882 1939 aa9.09□□□□□ -0.95
LINC00963-218ENST00000624138 USP17L5A8MUK1 530 aa9.08□□□□□ -0.96
LINC00963-218ENST00000624138 NPM3O75607 178 aaKnown RBP9.08□□□□□ -0.96
LINC00963-218ENST00000624138 SLC5A1P13866 664 aa9.08□□□□□ -0.96
LINC00963-218ENST00000624138 RGS2P41220 211 aa9.08□□□□□ -0.96
LINC00963-218ENST00000624138 ATN1P54259 1190 aaPredicted RBP9.08□□□□□ -0.96
LINC00963-218ENST00000624138 MAP3K12Q12852 859 aa9.08□□□□□ -0.96
LINC00963-218ENST00000624138 ANKRD44Q8N8A2 993 aa9.08□□□□□ -0.96
LINC00963-218ENST00000624138 KLHDC4Q8TBB5 520 aa9.08□□□□□ -0.96
LINC00963-218ENST00000624138 ATXN2LQ8WWM7 1075 aaKnown RBP9.08□□□□□ -0.96
LINC00963-218ENST00000624138 LPAR1Q92633 364 aa9.08□□□□□ -0.96
LINC00963-218ENST00000624138 BADQ92934 168 aa9.08□□□□□ -0.96
LINC00963-218ENST00000624138 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.08□□□□□ -0.96
LINC00963-218ENST00000624138 RBPJLQ9UBG7 517 aa9.08□□□□□ -0.96
LINC00963-218ENST00000624138 DNM1LO00429 736 aa9.07□□□□□ -0.96
LINC00963-218ENST00000624138 MSCO60682 206 aa9.07□□□□□ -0.96
LINC00963-218ENST00000624138 PEX10O60683 326 aa9.07□□□□□ -0.96
LINC00963-218ENST00000624138 CAP2P40123 477 aa9.07□□□□□ -0.96
LINC00963-218ENST00000624138 HERVK_113P62684 666 aa9.07□□□□□ -0.96
LINC00963-218ENST00000624138 ERVK-9P63128 1117 aa9.07□□□□□ -0.96
LINC00963-218ENST00000624138 ERVK-24P63145 666 aa9.07□□□□□ -0.96
LINC00963-218ENST00000624138 PDE3AQ14432 1141 aa9.07□□□□□ -0.96
LINC00963-218ENST00000624138 RRP1BQ14684 758 aaKnown RBP9.07□□□□□ -0.96
LINC00963-218ENST00000624138 GRIN2CQ14957 1233 aa9.07□□□□□ -0.96
LINC00963-218ENST00000624138 SNX17Q15036 470 aa9.07□□□□□ -0.96
LINC00963-218ENST00000624138 NCBP3Q53F19 620 aaKnown RBP9.07□□□□□ -0.96
LINC00963-218ENST00000624138 SLC39A5Q6ZMH5 540 aa9.07□□□□□ -0.96
LINC00963-218ENST00000624138 GPR142Q7Z601 462 aa9.07□□□□□ -0.96
LINC00963-218ENST00000624138 PLEKHH3Q7Z736 793 aa9.07□□□□□ -0.96
LINC00963-218ENST00000624138 APBA2Q99767 749 aa9.07□□□□□ -0.96
LINC00963-218ENST00000624138 WDR18Q9BV38 432 aa9.07□□□□□ -0.96
LINC00963-218ENST00000624138 PORCNQ9H237 461 aa9.07□□□□□ -0.96
LINC00963-218ENST00000624138 AS3MTQ9HBK9 375 aa9.07□□□□□ -0.96
LINC00963-218ENST00000624138 DDX20Q9UHI6 824 aaKnown RBP9.07□□□□□ -0.96
LINC00963-218ENST00000624138 DENND2AQ9ULE3 1009 aa9.07□□□□□ -0.96
LINC00963-218ENST00000624138 ARIH1Q9Y4X5 557 aaPredicted RBP9.07□□□□□ -0.96
LINC00963-218ENST00000624138 ZNF236Q9UL36 1845 aa9.07□□□□□ -0.96
LINC00963-218ENST00000624138 SYNGAP1Q96PV0 1343 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms