RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 PEX26Q7Z412 305 aa12.86□□□□□ -0.35
CLTC-215ENST00000621829 BRAPQ7Z569 592 aa12.86□□□□□ -0.35
CLTC-215ENST00000621829 TAB2Q9NYJ8 693 aa12.86□□□□□ -0.35
CLTC-215ENST00000621829 ATF3P18847 181 aa12.86□□□□□ -0.35
CLTC-215ENST00000621829 GYS2P54840 703 aa12.86□□□□□ -0.35
CLTC-215ENST00000621829 HOMER3Q9NSC5 361 aa12.86□□□□□ -0.35
CLTC-215ENST00000621829 KIF1CO43896 1103 aaKnown RBP12.86□□□□□ -0.35
CLTC-215ENST00000621829 CAPN12Q6ZSI9 719 aa12.86□□□□□ -0.35
CLTC-215ENST00000621829 PPP1R1BQ9UD71 204 aaPredicted RBP12.86□□□□□ -0.35
CLTC-215ENST00000621829 KIF22Q14807 665 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 GNPTABQ3T906 1256 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 SLC9C1Q4G0N8 1177 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 MMS22LQ6ZRQ5 1243 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 KRT23Q9C075 422 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 CABP5Q9NP86 173 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 NAPAP54920 295 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 MAP3K7CLP57077 242 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 LONRF2Q1L5Z9 754 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 IFIH1Q9BYX4 1025 aaKnown RBP12.85□□□□□ -0.35
CLTC-215ENST00000621829 ZNF202O95125 648 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 SYF2O95926 243 aaKnown RBP12.85□□□□□ -0.35
CLTC-215ENST00000621829 MYCNP04198 464 aaPredicted RBP12.85□□□□□ -0.35
CLTC-215ENST00000621829 DYDC2Q96IM9 177 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 GIPC1O14908 333 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 IQUBQ8NA54 791 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 CCDC89Q8N998 374 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 RHPN1Q8TCX5 695 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 USTQ9Y2C2 406 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 ZNF174Q15697 407 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 MEIS3Q99687 375 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 PPP2R2CQ9Y2T4 447 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 ADAT2Q7Z6V5 191 aaKnown RBP12.85□□□□□ -0.35
CLTC-215ENST00000621829 NLRP7Q8WX94 980 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 SH3GL3Q99963 347 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 ZKSCAN3Q9BRR0 538 aa12.85□□□□□ -0.35
CLTC-215ENST00000621829 NCOA2Q15596 1464 aa12.84□□□□□ -0.35
CLTC-215ENST00000621829 HAUS7Q99871 368 aa12.84□□□□□ -0.35
CLTC-215ENST00000621829 AFG3L2Q9Y4W6 797 aa12.84□□□□□ -0.35
CLTC-215ENST00000621829 ABCC11Q96J66 1382 aa12.84□□□□□ -0.35
CLTC-215ENST00000621829 ZC3H18Q86VM9 953 aaKnown RBP12.84□□□□□ -0.35
CLTC-215ENST00000621829 TRMT44Q8IYL2 757 aaKnown RBP12.84□□□□□ -0.35
CLTC-215ENST00000621829 PSMD2Q13200 908 aa12.84□□□□□ -0.35
CLTC-215ENST00000621829 TXNDC2Q86VQ3 553 aa12.84□□□□□ -0.35
CLTC-215ENST00000621829 POLKQ9UBT6 870 aa12.84□□□□□ -0.35
CLTC-215ENST00000621829 KIAA1107Q9UPP5 1409 aa12.84□□□□□ -0.35
CLTC-215ENST00000621829 EPB41P11171 864 aaKnown RBP12.84□□□□□ -0.35
CLTC-215ENST00000621829 RPS6KA2Q15349 733 aa12.84□□□□□ -0.35
CLTC-215ENST00000621829 CWF19L2Q2TBE0 894 aaKnown RBP12.84□□□□□ -0.35
CLTC-215ENST00000621829 ARMC2Q8NEN0 867 aa12.84□□□□□ -0.35
CLTC-215ENST00000621829 DPH5Q9H2P9 285 aa12.84□□□□□ -0.35
CLTC-215ENST00000621829 VWA3BQ502W6 1294 aa12.84□□□□□ -0.35
CLTC-215ENST00000621829 PROCA1Q8NCQ7 364 aaPredicted RBP12.84□□□□□ -0.35
CLTC-215ENST00000621829 ZFXP17010 805 aaPredicted RBP12.84□□□□□ -0.35
CLTC-215ENST00000621829 MAGEA1P43355 309 aa12.84□□□□□ -0.35
CLTC-215ENST00000621829 PAK1Q13153 545 aa12.84□□□□□ -0.35
CLTC-215ENST00000621829 PPP1R13BQ96KQ4 1090 aa12.84□□□□□ -0.35
CLTC-215ENST00000621829 KRT12Q99456 494 aa12.84□□□□□ -0.35
CLTC-215ENST00000621829 NUP58Q9BVL2 599 aa12.84□□□□□ -0.35
CLTC-215ENST00000621829 HELLSQ9NRZ9 838 aa12.84□□□□□ -0.35
CLTC-215ENST00000621829 PARP2Q9UGN5 583 aa12.84□□□□□ -0.35
CLTC-215ENST00000621829 KCNK3O14649 394 aa12.83□□□□□ -0.35
CLTC-215ENST00000621829 TSPY3P0CV98 308 aa12.83□□□□□ -0.35
CLTC-215ENST00000621829 TSPY8P0CW00 308 aa12.83□□□□□ -0.35
CLTC-215ENST00000621829 EEF1B2P24534 225 aaKnown RBP12.83□□□□□ -0.35
CLTC-215ENST00000621829 CSGALNACT2Q8N6G5 542 aa12.83□□□□□ -0.35
CLTC-215ENST00000621829 KCNH3Q9ULD8 1083 aa12.83□□□□□ -0.35
CLTC-215ENST00000621829 MAN1A2O60476 641 aa12.83□□□□□ -0.36
CLTC-215ENST00000621829 SCHIP1Q9P0W5 487 aaPredicted RBP12.83□□□□□ -0.36
CLTC-215ENST00000621829 KRIT1O00522 736 aa12.83□□□□□ -0.36
CLTC-215ENST00000621829 BUB1O43683 1085 aa12.83□□□□□ -0.36
CLTC-215ENST00000621829 NBPF10Q6P3W6 841 aaKnown RBP12.83□□□□□ -0.36
CLTC-215ENST00000621829 EIF3CLB5ME19 914 aaKnown RBP12.83□□□□□ -0.36
CLTC-215ENST00000621829 PDE4DQ08499 809 aa12.83□□□□□ -0.36
CLTC-215ENST00000621829 KIFAP3Q92845 792 aa12.83□□□□□ -0.36
CLTC-215ENST00000621829 KLHL29Q96CT2 875 aa12.83□□□□□ -0.36
CLTC-215ENST00000621829 EIF3CQ99613 913 aaKnown RBP12.83□□□□□ -0.36
CLTC-215ENST00000621829 EIF2AQ9BY44 585 aaKnown RBP12.83□□□□□ -0.36
CLTC-215ENST00000621829 TSKSQ9UJT2 592 aa12.83□□□□□ -0.36
CLTC-215ENST00000621829 PPME1Q9Y570 386 aa12.83□□□□□ -0.36
CLTC-215ENST00000621829 SKIP12755 728 aa12.83□□□□□ -0.36
CLTC-215ENST00000621829 LGSNQ5TDP6 509 aa12.83□□□□□ -0.36
CLTC-215ENST00000621829 PTCD1O75127 700 aaKnown RBP12.83□□□□□ -0.36
CLTC-215ENST00000621829 RILPL1Q5EBL4 403 aa12.83□□□□□ -0.36
CLTC-215ENST00000621829 LRRC8CQ8TDW0 803 aa12.83□□□□□ -0.36
CLTC-215ENST00000621829 PPWD1Q96BP3 646 aaKnown RBP12.83□□□□□ -0.36
CLTC-215ENST00000621829 NFE2L3Q9Y4A8 694 aa12.83□□□□□ -0.36
CLTC-215ENST00000621829 RPGRIP1Q96KN7 1286 aa12.83□□□□□ -0.36
CLTC-215ENST00000621829 INTS9Q9NV88 658 aaKnown RBP12.83□□□□□ -0.36
CLTC-215ENST00000621829 ANKFY1Q9P2R3 1169 aa12.83□□□□□ -0.36
CLTC-215ENST00000621829 WWC3Q9ULE0 1092 aa12.83□□□□□ -0.36
CLTC-215ENST00000621829 LONP1P36776 959 aaKnown RBP12.82□□□□□ -0.36
CLTC-215ENST00000621829 HIBCHQ6NVY1 386 aaPredicted RBP12.82□□□□□ -0.36
CLTC-215ENST00000621829 ST13P4Q8IZP2 240 aaPredicted RBP12.82□□□□□ -0.36
CLTC-215ENST00000621829 LRGUKQ96M69 825 aa12.82□□□□□ -0.36
CLTC-215ENST00000621829 TERF2Q15554 542 aa12.82□□□□□ -0.36
CLTC-215ENST00000621829 ANKRD20A4Q4UJ75 823 aa12.82□□□□□ -0.36
CLTC-215ENST00000621829 ANKRD20A8PQ5CZ79 823 aa12.82□□□□□ -0.36
CLTC-215ENST00000621829 ANKRD20A2Q5SQ80 823 aa12.82□□□□□ -0.36
CLTC-215ENST00000621829 ANKRD20A1Q5TYW2 823 aa12.82□□□□□ -0.36
CLTC-215ENST00000621829 HS2ST1Q7LGA3 356 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms