RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 EEF2KMTQ96G04 330 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 PNKPQ96T60 521 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 TSPYL1Q9H0U9 437 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 HELLSQ9NRZ9 838 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 CWC15Q9P013 229 aaKnown RBP7.92□□□□□ -1.14
NEDD9-216ENST00000620854 RRP15Q9Y3B9 282 aaKnown RBP7.92□□□□□ -1.14
NEDD9-216ENST00000620854 SALL1Q9NSC2 1324 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 TECPR2O15040 1411 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 C1orf167Q5SNV9 1468 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 SRCAPQ6ZRS2 3230 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 ERVV-2B6SEH9 535 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 IKBKBO14920 756 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 TXLNAP40222 546 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 ZAP70P43403 619 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 LDHAL6AQ6ZMR3 332 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 TTLL7Q6ZT98 887 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 BRAPQ7Z569 592 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 RAI14Q9P0K7 980 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 MON2Q7Z3U7 1717 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 PTPRUQ92729 1446 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 BAZ2BQ9UIF8 2168 aaKnown RBP7.91□□□□□ -1.14
NEDD9-216ENST00000620854 CDC25AP30304 524 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 ANTXR2P58335 489 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 GPIHBP1Q8IV16 184 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 ACRBPQ8NEB7 543 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 ABCF2Q9UG63 623 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 MAPK8IP1Q9UQF2 711 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 ENC1O14682 589 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 KIF5CO60282 957 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 IARSP41252 1262 aaKnown RBP7.91□□□□□ -1.14
NEDD9-216ENST00000620854 EPS15P42566 896 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 TDO2P48775 406 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 TMEM139Q8IV31 216 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 TFR2Q9UP52 801 aa7.91□□□□□ -1.14
NEDD9-216ENST00000620854 A1BGP04217 495 aa7.9□□□□□ -1.14
NEDD9-216ENST00000620854 CCDC175P0C221 793 aa7.9□□□□□ -1.14
NEDD9-216ENST00000620854 RBL2Q08999 1139 aa7.9□□□□□ -1.14
NEDD9-216ENST00000620854 NOM1Q5C9Z4 860 aaKnown RBP7.9□□□□□ -1.14
NEDD9-216ENST00000620854 SLC9C2Q5TAH2 1124 aa7.9□□□□□ -1.14
NEDD9-216ENST00000620854 ATG9AQ7Z3C6 839 aa7.9□□□□□ -1.14
NEDD9-216ENST00000620854 IGSF22Q8N9C0 903 aa7.9□□□□□ -1.14
NEDD9-216ENST00000620854 RIN2Q8WYP3 895 aaPredicted RBP7.9□□□□□ -1.14
NEDD9-216ENST00000620854 RABGGTAQ92696 567 aa7.9□□□□□ -1.14
NEDD9-216ENST00000620854 BPIFA3Q9BQP9 254 aa7.9□□□□□ -1.14
NEDD9-216ENST00000620854 CENPHQ9H3R5 247 aa7.9□□□□□ -1.14
NEDD9-216ENST00000620854 GPAA1O43292 621 aa7.9□□□□□ -1.14
NEDD9-216ENST00000620854 ACTN2P35609 894 aa7.9□□□□□ -1.14
NEDD9-216ENST00000620854 NR5A1Q13285 461 aa7.9□□□□□ -1.14
NEDD9-216ENST00000620854 RAD9BQ6WBX8 426 aa7.9□□□□□ -1.14
NEDD9-216ENST00000620854 ZHX3Q9H4I2 956 aa7.9□□□□□ -1.14
NEDD9-216ENST00000620854 KCND1Q9NSA2 647 aa7.9□□□□□ -1.14
NEDD9-216ENST00000620854 FAM208AQ9UK61 1670 aaKnown RBP7.9□□□□□ -1.14
NEDD9-216ENST00000620854 SH3TC1Q8TE82 1336 aa7.9□□□□□ -1.15
NEDD9-216ENST00000620854 STX10O60499 249 aa7.9□□□□□ -1.15
NEDD9-216ENST00000620854 GUCY1A2P33402 732 aa7.9□□□□□ -1.15
NEDD9-216ENST00000620854 MRPS25P82663 173 aaKnown RBP7.9□□□□□ -1.15
NEDD9-216ENST00000620854 NCAPH2Q6IBW4 605 aa7.9□□□□□ -1.15
NEDD9-216ENST00000620854 NBPF5PQ86XG9 351 aaPredicted RBP7.9□□□□□ -1.15
NEDD9-216ENST00000620854 CAPZA3Q96KX2 299 aa7.9□□□□□ -1.15
NEDD9-216ENST00000620854 MAGEC2Q9UBF1 373 aaPredicted RBP7.9□□□□□ -1.15
NEDD9-216ENST00000620854 MAN1B1Q9UKM7 699 aa7.9□□□□□ -1.15
NEDD9-216ENST00000620854 NIP7Q9Y221 180 aaKnown RBP eCLIP7.9□□□□□ -1.15
NEDD9-216ENST00000620854 CACNA1FO60840 1977 aa7.9□□□□□ -1.15
NEDD9-216ENST00000620854 CASP14P31944 242 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 VSNL1P62760 191 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 POSTNQ15063 836 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 CYB5R4Q7L1T6 521 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 DNAJC10Q8IXB1 793 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 SLC35F6Q8N357 371 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 AGXT2Q9BYV1 514 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 GUCA1BQ9UMX6 200 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 RTCBQ9Y3I0 505 aaKnown RBP7.89□□□□□ -1.15
NEDD9-216ENST00000620854 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.89□□□□□ -1.15
NEDD9-216ENST00000620854 TNS3Q68CZ2 1445 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 UTYO14607 1347 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 AKR1B15C9JRZ8 316 aaPredicted RBP7.89□□□□□ -1.15
NEDD9-216ENST00000620854 ATP2B2Q01814 1243 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 DHX8Q14562 1220 aaKnown RBP7.89□□□□□ -1.15
NEDD9-216ENST00000620854 RSRC2Q7L4I2 434 aaKnown RBP7.89□□□□□ -1.15
NEDD9-216ENST00000620854 SYNE4Q8N205 404 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 KIFC2Q96AC6 838 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 XAGE2Q96GT9 111 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 SETDB2Q96T68 719 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 VPS16Q9H269 839 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 SEC31BQ9NQW1 1179 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 TUBE1Q9UJT0 475 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 PALLDQ8WX93 1383 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 GOLGA8AA7E2F4 631 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 CUTAO60888 179 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 TUBB4AP04350 444 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 IKQ13123 557 aaPredicted RBP7.89□□□□□ -1.15
NEDD9-216ENST00000620854 E2F4Q16254 413 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 DNAJC21Q5F1R6 531 aaKnown RBP7.89□□□□□ -1.15
NEDD9-216ENST00000620854 HDXQ7Z353 690 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 SRLQ86TD4 932 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 NOA1Q8NC60 698 aaKnown RBP7.89□□□□□ -1.15
NEDD9-216ENST00000620854 GOLGA5Q8TBA6 731 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 FAM89AQ96GI7 184 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 DRC1Q96MC2 740 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 SLF1Q9BQI6 1058 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms